| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,837,849 | Δ1 bp | 5.6% | intergenic (+56/‑35) | PP_5114 → / → PP_5115 | adenine methyltransferase/zinc protease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,837,849 | 0 | G | . | 5.6% | 478.0 / 21.3 | 144 | intergenic (+56/‑35) | PP_5114/PP_5115 | adenine methyltransferase/zinc protease |
| Reads supporting (aligned to +/- strand): ref base G (65/71); new base . (6/2); total (71/73) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.63e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 | |||||||||||
Only 100 of 147 total aligned reads displayed.
GGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGAAAGGTTCTTTTACCCTCGCCAACGGCCTGCACGTCTGCCTGCGTGAAGACCACCGTGCGCCACTGGTCAGCGTG > NC_002947/5837700‑5837997 | ggCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTTCGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAg < 2:4625895/150‑1 (MQ=255)ggCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAg < 2:883608/150‑1 (MQ=255) aCCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTg > 1:4320016/1‑150 (MQ=255) aCCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTg > 1:2731021/1‑150 (MQ=255) cccTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGc < 1:1191997/150‑1 (MQ=255) cccTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGc < 1:1649633/150‑1 (MQ=255) tCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCAcc > 2:3055287/1‑150 (MQ=255) tCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCAcc > 1:4370152/1‑150 (MQ=255) tCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCAcc > 1:3795820/1‑150 (MQ=255) aCCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTc < 1:1366931/150‑1 (MQ=255) aCCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTc < 2:4373680/150‑1 (MQ=255) aCCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAA‑CTGCTCCTTCa < 2:3457037/150‑1 (MQ=255) cTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCAt > 2:581353/1‑150 (MQ=255) cTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCAt < 2:4796105/150‑1 (MQ=255) gCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTc < 2:4267956/150‑1 (MQ=255) aGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCt < 2:307589/150‑1 (MQ=255) aGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAA‑CTGCTCCTTCaggaaatg < 1:87523/150‑8 (MQ=255) cTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGa < 1:4475543/150‑1 (MQ=255) tGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGaa < 2:2000839/150‑1 (MQ=255) gCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAg < 2:1929259/150‑1 (MQ=255) gCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACGACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTAGCGCACCCCACCTGCGCGATGGTTGAAGCTGCAGCTTCATGTCCTGAAg < 2:3012975/150‑1 (MQ=255) gCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCa < 2:2344073/150‑1 (MQ=255) gCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCa < 1:4423554/150‑1 (MQ=255) cAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAg > 2:3372523/1‑150 (MQ=255) cAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAg < 2:4342512/150‑1 (MQ=255) aaCTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑t > 1:722325/1‑150 (MQ=255) cTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTc > 1:1510630/1‑150 (MQ=255) tGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCa > 2:2686504/1‑150 (MQ=255) ggCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCaa < 2:128352/150‑1 (MQ=255) ccTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCAt < 2:1633234/150‑1 (MQ=255) ccTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCAt > 1:3305442/1‑150 (MQ=255) cTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATg > 1:4312931/1‑150 (MQ=255) gCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGc > 2:4652003/1‑150 (MQ=255) gagaAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAacac < 2:432997/150‑1 (MQ=255) gaagaCCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGGTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTc > 1:3564519/1‑150 (MQ=255) agaCCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTccc < 1:2064683/150‑1 (MQ=255) gaCCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTcccc > 2:2893589/1‑150 (MQ=255) cGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCccgcc > 1:305871/1‑150 (MQ=255) gCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCcgccgc < 2:5012208/150‑1 (MQ=255) aGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTaa < 2:2779380/150‑1 (MQ=255) aGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTaa < 2:2779507/150‑1 (MQ=255) gTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATg > 2:1325149/1‑150 (MQ=255) gTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATg < 2:4370152/150‑1 (MQ=255) gTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATg > 1:2681911/1‑150 (MQ=255) cACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCa < 2:3777290/150‑1 (MQ=255) tACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGcc > 2:3617249/1‑150 (MQ=255) tgcacctGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCATCCATGGGCGAACACCCCTCCCCGCCGCTATTGGCAGCCTCg > 1:3250933/6‑150 (MQ=255) aCTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCAAGGTTGAAGCTGCACCTTCATTTACTGAAGGAGAAG‑TTCAACCATGGCCGAAAACCCCTACCCCCCGCTAAAGTCAGCCTCGaa > 1:916022/1‑150 (MQ=255) ctctGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGaaa > 2:1144977/1‑150 (MQ=255) ctGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGAAAgg < 2:751156/150‑1 (MQ=255) cAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGAAAGGTTCt < 2:3894262/150‑1 (MQ=255) cAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCGCGAAAGGTTCt > 1:449559/1‑150 (MQ=255) aGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGAAAGGTTCtt < 2:305871/150‑1 (MQ=255) aGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGAAAGGTTCtt < 1:2914228/150‑1 (MQ=255) gCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATGTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGAAAGGTTCttt < 2:4974154/150‑1 (MQ=255) ggggCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGAAAGGTTCTTTTa < 1:1287700/150‑1 (MQ=255) ggCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGAAAGGTTCTTTTAcc < 1:393531/150‑1 (MQ=255) ggCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGAAAGGTTCTTTTAcc > 2:1806069/1‑150 (MQ=255) aTTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGAAAGGTTCTTTTACCCTCGc > 2:8828/1‑150 (MQ=255) ccGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAg > 1:3728527/1‑76 (MQ=255) ccGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGAAAGGTTCTTTTACCCTCGCCAACg > 2:3468557/1‑150 (MQ=255) cgcgGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGAAAGGTTCTTTTACCCTCGCCAACgg > 2:319482/1‑150 (MQ=255) gCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGAAAGGTTCTTTTACCCTCGCCAACGGCCTg < 2:4830869/150‑1 (MQ=255) ttGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGAAAGGTTCTTTTACCCTCGCCAACGGCCTGCa > 1:4916646/1‑150 (MQ=255) tgtACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGAAAGGTTCTTTTACCCTCGCCAACGGCCTGCACGTct < 1:1200298/150‑1 (MQ=255) aCTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGAAAGGTTCTTTTACCCTCGCCAACGGCCTGCACGTctgcc < 1:4788340/150‑1 (MQ=255) cTTAGTTACCGCACCCCACCTGCGCCATGGTTGCAGCTGCACCTTCATTTCCTGAAGGAGCCG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGAAAGGTTCTTTTCCCCTCGCCAACGGCCTGCACGTctgcct < 2:1291979/150‑1 (MQ=255) cTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGAAAGGTTCTTTTACCCTCGCCAACGGCCTGCACGTctgcct > 1:3591886/1‑150 (MQ=255) ttAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGAAAGGTTCTTTTACCCTCGCCAACGGCCTGCACGTctgcctg > 2:4589033/1‑150 (MQ=255) ttAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGAAAGGTTCTTTTACCCTCGCCAACGGCCTGCACGTctgcctg > 1:4785935/1‑150 (MQ=255) ttAGTTACCGCACCCCACCTGCGCCAAGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGAAAGGTTCTTTTACCCTCGCCAACGGCCTGCACGTctgcctg > 1:3985481/1‑150 (MQ=255) aCCGCACCCCACCTGCGCCATGGTTGACGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGAAAGGTTCTTTTACCCTCGCCAACGGCCTGCACGTCTGCCTGCGTGaa < 2:3118327/150‑1 (MQ=255) aCCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGc > 2:643376/1‑54 (MQ=255) aCCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGc < 1:643376/54‑1 (MQ=255) aCCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGAAAGGTTCTTTTACCCTCGCCAACGGCCTGCACGTCTGCCTGCGTGaa < 1:2856048/150‑1 (MQ=255) ccGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGAAAGGTTCTTTTACCCTCGCCAACGGCCTGCACGTCTGCCTGCGTGAAg < 1:3103220/150‑1 (MQ=255) ccGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGAAAGGTTCTTTTACCCTCGCCAACGGCCTGCACGTCTGCCTGCGTGAAg > 1:4883591/1‑150 (MQ=255) ccGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGAAAGGTCCTTTTACCCTCGCCAACGGCCTGCACGTCTGCCTGCGTGAAg < 1:667583/150‑1 (MQ=255) cGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGAAAGGTTCTTTTACCCTCGCCAACGGCCTGCACGTCTGCCTGCGTGAAGa > 2:2227547/1‑150 (MQ=255) cGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGAAAGGTTCTTTTACCCTCGCCAACGGCCTGCACGTCTGCCTGCGTGAAGa > 2:233433/1‑150 (MQ=255) gCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGAAAGGTTCTTTTACCCTCGCCAACGGCCTGCACGTCTGCCTGCGTGAAGac > 2:186878/1‑150 (MQ=255) cACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGAAAGGTTCTTTTACCCTCGCCAACGGCCTGCACGTCTGCCTGCGTGAAGacc < 2:1599823/150‑1 (MQ=255) ccccACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGAAAGGTTCTTTTACCCTCGCCAACGGCCTGCACGTCTGCCTGCGTGAAGaccac > 2:4176617/1‑150 (MQ=255) cccACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCTTGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGAAAGGTTCTTTTACCCTCGCCAACGGCCTGCACGTCTGCCTGCGTGAAGaccacc < 2:1510633/150‑1 (MQ=255) cccACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGAAAGGTTCTTTTACCCTCGCCAACGGCCTGCACGTCTGCCTGCGTGAAGaccacc < 2:1510630/150‑1 (MQ=255) ccACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGAAAGGTTCTTTTACCCTCGCCAACGGCCTGCACGTCTGCCTGCGTGAAGACCACCg > 1:679918/1‑150 (MQ=255) tGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGAAAGGTTCTTTTACCCTCGCCAACGGCCTGCACGTCTGCCTGCGTGAAGACCACCGTgcgc < 1:1848482/150‑1 (MQ=255) cgcCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGAAAGGTTCTTTTACCCTCGCCAACGGCCTGCACGTCTGCCTGCGTGAAGACCACCGTGCGCCa < 2:4262958/150‑1 (MQ=255) gcCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGAAAGGTTCTTTTACCCTCGCCAACGGCCTGCACGTCTGCCTGCGTGAAGACCACCGTGCGCCAc > 2:368290/1‑150 (MQ=255) gcCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCGCGAAAGGTTCTTTTACCCTCGCCAACGGCCTGCACGTCTGCCTGCGTGAAGACCACCGTGCGCCAc > 2:3319361/1‑150 (MQ=255) cATGGTTGAA‑CTGCTCCTTCAGGAAATGAAGGTGCAGCTTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGAAAGGTTCTTTTACCCTCGCCAACGGCCTGCACGTCTGCCTGCGTGAAGACCACCGTGCGCCACTg > 2:472554/1‑150 (MQ=25) cATGGTTGAA‑CTGCTCCTTCAGGAAATGAAGGTGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGAATGGTTCTTTTACCCTCGCCAACTGCCTGCACGTCTGCCTGCGTGAAGACCAACGTGCTCCACTgg > 2:751440/1‑150 (MQ=25) aTGGTTGAA‑CTGCTCCTTCAGGAAATGAAGGTGCAGCTTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGAAAGGTTCTTTTACCCTCGCCAACGGCCTGCACGTCTGCCTGCGTGAAGACCACCGTGCGCCACTgg > 2:3465887/1‑150 (MQ=37) aTGGTTGAA‑CTGCTCCTTCAGGAAATGAAGGTGCAGCTTCAACCATGGCCGAACACCCCTCCCCGCCGCGAATGGCAGCCTCGAAAGGTTCTTTTACCCTCGCCAACGGCCTGCACGTCTGCCTGCGTGAAGACCACCGTGCGCCACTgg > 1:4936833/1‑150 (MQ=25) tGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGAAAGGTTCTTTTACCCTCGCCAACGGCCTGCACGTCTGCCTGCGTGAAGACCACCGTGCGCCACTGGt < 1:3372523/150‑1 (MQ=255) gTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGAAAGGTTCTTTTACCCTCGCCAACGGCCTGCACGTCTGCCTGCGTGAAGACCACCGTGCGCCACTGGTCa < 1:2212837/150‑1 (MQ=255) ttGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGAAAGGTTCTTTTACCCTCGCCAACGGCCTGCACGTCTGCCTGCGTGAAGACCACCGTGCGCCACTGGTCAg > 2:4044546/1‑150 (MQ=255) aaGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGAAAGGTTCTTTTACCCTCGCCAACGGCCTGCACGTCTGCCTGCGTGAAGACCACCGTGCGCCACTGGTCAGCGt < 2:2615670/150‑1 (MQ=255) aGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGAAAGGTTCTTTTACCCTCGCCAACGGCCTGCACGTCTGCCTGCGTGAAGACCACCGTGCGCCACTGGTCAGCGTg < 2:2731021/150‑1 (MQ=255) aGCTGCACCTGCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGAAAGGTTCTTTGACCCTCGCCAACGGCCTGCACGTCTGCCTGCGTGAAGACCACCGTGCGCCACTGGTCAGCGTg < 2:4320016/150‑1 (MQ=255) | GGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCCTGAAGGAGCAG‑TTCAACCATGGCCGAACACCCCTCCCCGCCGCTAATGGCAGCCTCGAAAGGTTCTTTTACCCTCGCCAACGGCCTGCACGTCTGCCTGCGTGAAGACCACCGTGCGCCACTGGTCAGCGTG > NC_002947/5837700‑5837997 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |