| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 26,837:1 | +A | 12.3% | intergenic (+33/+152) | PP_0021 → / ← PP_0022 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 26,837 | 1 | . | A | 12.3% | 527.2 / 78.4 | 146 | intergenic (+33/+152) | PP_0021/PP_0022 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (61/67); new base A (11/7); total (72/74) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.22e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.33e-01 | |||||||||||
Only 100 of 148 total aligned reads displayed.
GGCTTGGTTCGAATCCCTTATCCGGATGCCGGTTGATCATCCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTATGCTGCTCGGGGCCTTGCCACGCCGCGGT > NC_002947/26690‑26985 | ggCTTGGTTCGAATCCCTTATCCGGATGCCGGTTGATCATCCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑aa > 1:3135995/1‑150 (MQ=255) gCTTGGTTCGAATCCCTTATCCGGATGCCGGTTGATCATCCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AAc < 1:1806256/150‑1 (MQ=255) ttCGAATCCCTTATCCGGATGCCGGTTGATCATCCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGt > 2:2821527/1‑150 (MQ=255) tCGAATCCCTTATCCGGATGCCGGTTGATCATCCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTg < 2:1909/150‑1 (MQ=255) tCGAATCCCTTATCCGGATGCCGGTTGATCATCCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTg < 2:3722021/150‑1 (MQ=255) gAATCCCTTATCCGGATGCCGGTTGATCATCCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGt < 1:2477756/150‑1 (MQ=255) gAATCCCTTATCCGGAGGCCGGTTGATCATCCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGt < 2:3188655/150‑1 (MQ=255) aaTCCCTTATCCGGATGCCGGTTGATCATCCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGtt > 1:392063/1‑150 (MQ=255) aaTCCCGTATCCGGATGCCGGTTGATCATCCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCGGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGtt > 2:3589148/1‑150 (MQ=255) tCCCTTATCCGGATGCCGGTTGATCATCCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTa < 1:744085/150‑1 (MQ=255) cccTTATCCGGATGCCGGTTGATCATCCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACTGTGGttaca < 1:335824/150‑4 (MQ=255) cccTTATCCGGATGCCGGTTGATCATCCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTAc > 1:3471586/1‑150 (MQ=255) cccTTATCCGGAGGCCGGTTGATCATCCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGTAAACCACTGTGGttac < 1:1267691/150‑3 (MQ=255) ccTTATCCGGATGCCGGTTGATCATCCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACa < 1:1861971/150‑1 (MQ=255) ccTTATCCGGATGCCGGTTGATCATCCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACa > 2:4733227/1‑150 (MQ=255) ccTTATCCGGATGCCGGTTGATCATCCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACa < 2:855986/150‑1 (MQ=255) ccTTATCCGGATGCCGGTTGATCATCCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACa < 2:4391860/150‑1 (MQ=255) ccTTATCCGGATGCCGGTTGATCATCCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACa < 2:2083929/150‑1 (MQ=255) ccTTATCCGGATGCCGGTTGATCATCCTGATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACa < 2:4281377/150‑1 (MQ=255) ttATCCGGATGCCGGTTGATCATCCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGt < 1:4210790/150‑1 (MQ=255) ttATCCGGATGCCGGTTGATCATCCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGt < 2:4261343/150‑1 (MQ=255) ttATCCGGATGCCGGTTGATCATCCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGt < 2:1054361/150‑1 (MQ=255) ttATCCGGATGCCGGTTGATCATCCTTATCGCAGAATGGAGAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGTAAACCACTGTGG‑TTACAGt < 2:4703351/150‑1 (MQ=38) aTCCGGATGCCGGTTGATCATCCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCTGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGTAAACCACTGTGG‑TTACAGTGa < 1:5075200/150‑1 (MQ=38) aggCCGGTTGATCATCCTTATCGCAGACTGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGaaaaaaa < 2:3939556/148‑1 (MQ=255) cGGTTGATCATCCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTgg < 2:4920692/150‑1 (MQ=255) ttGATCATCCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGttt < 1:200334/150‑1 (MQ=255) catcCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAAc < 2:2344209/150‑1 (MQ=255) atcCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGTAAACCACTGTGG‑TTACAGTGAAAAAAAGTGGTTTACAAca < 2:713248/150‑2 (MQ=37) atcCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGGGGTGTACAGTGCAAAAAAGTGGTTTACAACg > 1:1186312/1‑150 (MQ=255) ccTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTa < 2:3361493/150‑1 (MQ=255) ccTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTATTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTa < 2:1334820/150‑1 (MQ=255) aTCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTa < 2:2805608/150‑1 (MQ=255) tCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTAc < 2:1253655/150‑1 (MQ=255) aTAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACgcgcgc < 1:4078865/150‑3 (MQ=255) aTAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGAGGTTTACAACGTAGCTACGACACGCGccc > 1:3295036/1‑150 (MQ=255) tAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCt > 1:2910540/1‑150 (MQ=255) agTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGc < 1:3520764/150‑1 (MQ=255) tGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCa < 1:2837199/150‑1 (MQ=255) tGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCa > 2:1585271/1‑150 (MQ=255) tGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTCTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCa < 2:1864018/150‑1 (MQ=255) aTGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTccc < 2:3206498/150‑1 (MQ=255) ggCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCa < 2:392063/150‑1 (MQ=255) ggCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCa < 1:1791687/150‑1 (MQ=255) ggCCCGGGAGGAACTGGGCGATCGGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCa < 2:3433400/150‑1 (MQ=255) ccGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAGAAAAAGTGGGTTACACGGTAGCTACGACACGCGCCCTGGCCACTCCCCAggg > 2:3776000/1‑149 (MQ=255) ccGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGc > 1:4063419/1‑150 (MQ=255) ccGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGc > 1:3517540/1‑150 (MQ=255) gATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCCGCGCGCTCCTCAtt > 1:4517983/1‑150 (MQ=255) tgctgGAGCTGACACAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGAtt < 2:5100262/150‑1 (MQ=255) gctgGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTc < 2:3326511/150‑1 (MQ=255) gctgGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTc < 2:754172/150‑1 (MQ=255) tgGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTAAAGTGGAAAAAAGTGGTTTACAACGTAGCAAAGACAAGCGCCCAGGCCACGCCCCAGGCCCGCGCGCACCACAGTGATTCGt > 1:2154071/1‑150 (MQ=37) ggAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGtt < 2:4374926/150‑1 (MQ=255) gCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAg > 1:2667613/1‑150 (MQ=255) gCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAg > 2:3013862/1‑150 (MQ=255) tGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGGAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTc > 2:3678401/1‑150 (MQ=255) aCTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCgg < 2:5114071/150‑1 (MQ=255) aCTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCgg < 1:119468/150‑1 (MQ=255) cTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCggg > 2:4875130/1‑150 (MQ=255) tCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCCGCGCGCTCCTCATTGCTTCGTTCAGTCGGGc > 2:1381152/1‑150 (MQ=255) tCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGc < 1:1159650/150‑1 (MQ=255) tCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGc > 2:1298742/1‑150 (MQ=255) aGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGt < 1:133333/150‑1 (MQ=255) gCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCg > 1:2324402/1‑150 (MQ=255) gCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCg > 1:1938368/1‑150 (MQ=255) cTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGaa < 2:2641633/150‑1 (MQ=255) gaggagGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAaca > 2:2129266/1‑150 (MQ=255) gaggCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCt < 2:774777/150‑1 (MQ=255) gCCTGTTGAAAACCACTTTTTTTACACTGA‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTAACAACGAAGCTACGACACGCGCCCTGGCCACACCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGGCGGGCGTCGAACACCTAt > 2:163744/1‑150 (MQ=38) ccTGTTGTAAACCACTTTTTAT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTAtgc < 2:5038024/150‑1 (MQ=255) cTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTAtgct > 2:302254/1‑150 (MQ=255) cTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTAtgct > 1:621591/1‑150 (MQ=255) tgttgtAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTAtgctg > 1:1606987/1‑150 (MQ=255) tgttgtAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTAtgctg > 2:1288013/1‑150 (MQ=255) tAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTATGCTGCTCgg > 1:3355438/1‑150 (MQ=255) aaCCACTTTTTTT‑CACTGT‑ACCCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACACCGTAGCTACGACACGCGCCCTGGCCACGCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTATGCTGCTCgggg > 1:1421129/1‑150 (MQ=255) aaCCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTATGCTGCTCgggg < 1:3770276/150‑1 (MQ=255) aCCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTATGCTGCTCGGGGc > 1:4240191/1‑150 (MQ=255) cACTTTTTTT‑CACTGTAAACCACTGTGG‑TTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTATGCTGCTCGGGGCCt > 1:694554/1‑150 (MQ=255) cACTTTTTTT‑CACTGTAAACCACTGTGG‑TTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTATGCTGCTCGGGGCCt > 1:1085363/1‑150 (MQ=255) cACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTATGCTGCTCggg > 2:2188071/1‑146 (MQ=255) cACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTATGCTGCTCggg < 1:2188071/146‑1 (MQ=255) cACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTATGCTGCTCGGGGCCt > 1:4740304/1‑150 (MQ=255) ttttttt‑CACTGTAAACCACTGTGG‑TTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTATGCTGCTCGGGGCCTTGc > 1:3423387/1‑150 (MQ=255) ttttttt‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCTTTGATTCGTTCAGTCGGGCGTCGAACACCTATGCTGCTCGGGGCCTTGc > 2:3061171/1‑150 (MQ=255) ttttttt‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCa < 2:4978674/113‑1 (MQ=255) ttttttt‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTATGCTGCTCGGGGCCTTGc > 2:2017292/1‑150 (MQ=255) ttgtt‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTATGCTGCTCGGGGCCTTGCCa < 2:3135995/147‑1 (MQ=255) tttt‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTATGCTGCTCGGGGCCTTGCCAc > 1:4843349/1‑150 (MQ=255) tt‑CACTGTAAACCACTGTGG‑TTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTATGCTGCTCGGGGCCTTGCCAcgc > 2:4516272/1‑150 (MQ=255) tt‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCCGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTATGCTGCTCGGGGCCTTGCCAcgc > 1:3173903/1‑150 (MQ=255) tt‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTATGCTGCTCGGGGCCTTGCCAcgc > 2:4434641/1‑150 (MQ=255) t‑CACTGTAAACCACTGTGG‑TTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTATGCTGCTCGGGGCCTTGCCAcgcc > 1:2684588/1‑150 (MQ=255) t‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTATGCTGCTCGGGGCCTTGCCAcgcc > 1:4444713/1‑150 (MQ=255) aCTGTAAACCACTGTGG‑TTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTATGCTGCTCGGGGCCTTGCCAcgccgc > 2:1113608/1‑150 (MQ=255) cTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTATGCTGCTCGGGGCCTTGCCACGCcgcg > 1:3643164/1‑150 (MQ=255) cTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTATGCTGCTCGGGGCCTTGCCACGCcgcg > 1:3643340/1‑150 (MQ=255) tGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTATGCTGCTCGGGGCCTTGCCACGCCGCgg > 1:2276931/1‑150 (MQ=255) gT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTATGCTGCTCGGGGCCTTGCCACGCCGCGgt > 1:253868/1‑150 (MQ=255) | GGCTTGGTTCGAATCCCTTATCCGGATGCCGGTTGATCATCCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTT‑CACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTATGCTGCTCGGGGCCTTGCCACGCCGCGGT > NC_002947/26690‑26985 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |