| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,569,050:1 | +C | 5.5% | coding (843/879 nt) | PP_2250 ← | LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,569,050 | 1 | . | C | 5.5% | 566.3 / 24.6 | 128 | coding (843/879 nt) | PP_2250 | LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base . (63/58); new base C (2/5); total (65/63) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.70e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.44e-01 | |||||||||||
Only 100 of 129 total aligned reads displayed.
GGCGCAGCGCGCTCATGA‑CGCGGTGCGGGGCCTATCGACCGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCGGGGCGACCCGCGACAACGGCAGATCTCCCCAGCCCAAGC > NC_002947/2568901‑2569198 | cccgcACCGCG‑TCATGAGCGCGCTGCGGGGCCTATCGACCGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCa > 1:3188330/3‑150 (MQ=255) gcgcTCATGA‑CGCGGTGCGGGGCCTATCGACCGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGGCAGCTGCTCGATCAGCAGGCGTGCA‑GCctgctg < 2:2541700/150‑1 (MQ=255) gcgcTCATGA‑CGCGGTGCGGGGCCTATCGACCGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGGCAGCTGCTCGATCAGCAGGCGTGCA‑GCctgctg < 2:2541600/150‑1 (MQ=255) gcTCATGA‑CGCGGTGCGGGGCCTATCGACCGAGGTATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGC‑TGCACGCctgctgat < 1:1570867/150‑3 (MQ=255) gcTCATGA‑CGCGGTGCGGGGCCTATCGACCGAGGTATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGC‑TGCACGCctgctgat < 1:1571134/150‑3 (MQ=255) gcTCATGA‑CGCGGTGCGGGGCCTATCGACCGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGC‑TGCACGCctgctgat < 1:2647407/150‑3 (MQ=255) tCATGA‑CGCGGTGCGGGGCCTATCGACCGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGc < 1:2374626/150‑1 (MQ=255) aTGA‑CGCGGTGCGGGGCCTATCGACCGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCgg > 2:127862/1‑150 (MQ=255) tGA‑CGCGGTGCGGGGCCTATCGACCGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGc < 2:299622/150‑1 (MQ=255) tGA‑CGCGGTGCGGGGCCTATCGACCGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGc < 2:299626/150‑1 (MQ=255) gA‑CGCGGTGCGGGGCCTATCGACCGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCt < 2:2826550/150‑1 (MQ=255) gA‑CGCGGTGCGGGGCCTATCGACCGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCt < 1:1350037/150‑1 (MQ=255) gggTGCGGGGCCTATCGTCCGAGATATCGGCTTGATGGTTAAAAGATTGAAGTGCTTAGGGTAAATTCTTACAGACTTTTCGAAGGACGTCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCTGCtgttg < 2:3017094/149‑1 (MQ=255) ggTGCGTGGCCTATCGACCGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCT‑GCCTGCTGCAGCGGCtgttgt < 2:2843455/150‑1 (MQ=255) ggTGCGGGGCCTATCGACCGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCtgttgt < 2:5018192/150‑1 (MQ=255) ggTGCGGGGCCTATCGACCGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCtgttgt < 1:3889676/150‑1 (MQ=255) cGGGGCCTATCGACCGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTgc < 1:3114680/150‑1 (MQ=255) gggCCTATCGACCGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTgcgc > 1:1876390/1‑150 (MQ=255) gggCCTATCGACCGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTgcgc > 1:1589153/1‑150 (MQ=255) gCCTATCGACAGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCca < 2:5085381/150‑1 (MQ=255) ccTATCGACCGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCcac > 2:814136/1‑150 (MQ=255) ccTATCGACCGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCcac > 2:1022295/1‑150 (MQ=255) cTATCGACCGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCcaca < 1:3262211/150‑1 (MQ=255) cTATCGACCGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCcaca < 1:696534/150‑1 (MQ=255) cTATCGACCGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCcaca < 1:367759/150‑1 (MQ=255) cTATCGACCGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCcaca < 1:2859652/150‑1 (MQ=255) cTATCGACCGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCcaca < 1:2034584/150‑1 (MQ=255) cTATCGACCGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCcaca < 1:201631/150‑1 (MQ=255) cTATCGACCGAGATATCGGCGTGAGGGGTCAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCcaca > 2:3142006/1‑150 (MQ=255) tATCGACCGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAg > 2:5077742/1‑150 (MQ=255) tCGACCGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGa > 2:3137022/1‑150 (MQ=255) tCGACCGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGa < 2:1621158/150‑1 (MQ=255) tCGACCGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGa < 1:4073782/150‑1 (MQ=255) aCCGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGatat > 2:578737/1‑150 (MQ=255) aCCGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCAGCTGCAGCGGCTGTTGTTTGCGCCACAGGatat > 2:435372/1‑150 (MQ=255) gagaTATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCa > 1:2037505/1‑150 (MQ=255) gaTATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACg < 1:2909082/150‑1 (MQ=255) tatCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACggg > 1:666766/1‑150 (MQ=255) tCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCa < 2:4335475/150‑1 (MQ=255) ggCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGt > 1:402456/1‑150 (MQ=255) gCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGtt > 1:2562669/1‑150 (MQ=255) ttGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGc < 1:4273460/150‑1 (MQ=255) gggTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTc > 2:1705110/1‑150 (MQ=255) ggTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCg > 2:285837/1‑150 (MQ=255) tAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGtt > 2:4639113/1‑150 (MQ=255) tAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGtt > 2:2682687/1‑150 (MQ=255) tAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGtt < 2:5006505/150‑1 (MQ=255) aGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCgt < 1:1022295/150‑1 (MQ=255) aGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCgt < 2:4623653/150‑1 (MQ=255) ttGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTa < 1:255407/150‑1 (MQ=255) aaGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTa > 1:1703370/1‑150 (MQ=255) aaGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTa > 2:2259192/1‑150 (MQ=255) aaGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTa > 2:185036/1‑150 (MQ=255) gTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGAGATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACg > 2:4556228/1‑150 (MQ=255) tGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACgg < 1:1873685/150‑1 (MQ=255) tGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACgg < 1:4451691/150‑1 (MQ=255) ggAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCa > 1:5041091/1‑150 (MQ=255) aaaaTTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAgg > 1:3552505/1‑150 (MQ=255) aaaTTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGgc < 2:1022176/150‑1 (MQ=255) aaTTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGgcg > 1:1116839/1‑150 (MQ=255) aTTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCtgttgt < 1:604810/87‑1 (MQ=255) tACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAg > 2:3710398/1‑150 (MQ=255) tACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGGTGTTTGCGCCACAGGATCTGCACGGGCAGTTGCCATTCGTTGCGTGTATTACGGAATTCCAGGCGCAcccg > 2:3710678/1‑148 (MQ=255) aGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACg > 2:2554524/1‑150 (MQ=255) aGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACg > 1:1158173/1‑150 (MQ=255) aGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCACACCAGACg > 1:4748228/1‑150 (MQ=255) gacggacgGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGc < 2:431872/150‑1 (MQ=255) gacggCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCcagc < 1:957541/150‑1 (MQ=255) aGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCggg < 1:2284624/150‑1 (MQ=255) aGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCggg < 1:4954286/150‑1 (MQ=255) aGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCggg < 1:3109689/150‑1 (MQ=255) gTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCgggg < 1:1034672/150‑1 (MQ=255) tCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGGTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCGGGGc > 2:2579828/1‑150 (MQ=255) aCGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTCTTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCGGGGCGa > 1:2917474/1‑150 (MQ=255) aCGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCGGGGCGa > 2:1895089/1‑150 (MQ=255) aCGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCGGGGCGa > 2:3510319/1‑150 (MQ=255) aCGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCGGGGCGa > 2:3510322/1‑150 (MQ=255) aCGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCGGGGCGa > 2:4782538/1‑150 (MQ=255) cGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCGGGGCGAc < 1:3137022/150‑1 (MQ=255) acgccagcTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCGGGGCGACCcgcg > 2:1719769/3‑150 (MQ=255) agccagcTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCGGGGCGACCCGCGa < 2:757785/150‑1 (MQ=255) gccagcTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCGGGGCGACCCGCGAc > 2:1460094/1‑150 (MQ=255) agcTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCGGGGCGACCCGCGACAAc < 2:1113667/150‑1 (MQ=255) gctgctCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCGGGGCGACCCGCGACAACg > 2:942127/1‑150 (MQ=255) gctgctCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCGGGGCGACCCGCGACAACg < 1:3203137/150‑1 (MQ=255) tgctCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCGGGGCGACCCGCGACAACGGc > 2:1080638/1‑150 (MQ=255) gctCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCGGGGCGACCCGCGACAACGGCa < 1:4288574/150‑1 (MQ=255) gctCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCGGGGCGACCCGCGACAACGGCa < 1:4288564/150‑1 (MQ=255) gctCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCGGGGCGACCCGCGACAACGGCa < 1:578737/150‑1 (MQ=255) ctCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCGCCAGACGCCCGCTGGCCAGCAGCGGGGCGACCCGCGACAACGGCAg < 2:3690521/150‑1 (MQ=255) ctCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCGGGGCGACCCGCGACAACGGCAg < 1:2524946/150‑1 (MQ=255) cGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCGGGGCGACCCGCGACAACGGCAGAt > 2:2838681/1‑150 (MQ=255) tgcagcagGC‑TGCACGCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCGGGGCGACCCGCGACAACGGCAGAtct > 1:1411924/3‑150 (MQ=255) tgcagcagGC‑TGCACGCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCGGGGCGACCCGCGACAACGGCAGAtct > 1:1411830/3‑150 (MQ=255) tCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCGGGGCGACCCGCGACAACGGCAGAtctc > 1:3059661/1‑150 (MQ=255) cagGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCGGGGCGACCCGCGACAACGGCAGATCTCCCCa > 1:4475382/1‑150 (MQ=255) cagGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCGGGGCGACCCGCGACAACGGCAGATCTCCCCa > 2:4065919/1‑150 (MQ=255) gCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCGGGGCGACCCGCGACAACGGCAGATCTCCCCAGcc > 1:976856/1‑150 (MQ=255) gCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCGGGGCGACCCGCGACAACGGCAGATCTCCCCAGCCCAAg > 1:4842044/1‑150 (MQ=255) cA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCGGGGCGACCCGCGACAACGGCAGATCTCCCCAGCCCAAGc < 2:509323/150‑1 (MQ=255) | GGCGCAGCGCGCTCATGA‑CGCGGTGCGGGGCCTATCGACCGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCGGGGCGACCCGCGACAACGGCAGATCTCCCCAGCCCAAGC > NC_002947/2568901‑2569198 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |