BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	3,058,923:1	+A	7.6%	coding (390/990 nt)	PP_2669 ←	outer membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	3,058,923	1	.	A	7.6%	482.4 / 34.3	119	coding (390/990 nt)	PP_2669	outer membrane protein
Reads supporting (aligned to +/- strand): ref base . (54/56); new base A (5/4); total (59/60)
Fisher's exact test for biased strand distribution p-value = 7.43e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.16e-01

Only 100 of 123 total aligned reads displayed.

TCGGCCAGGGTCTGGGTGCTGGTGTCGATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCTTGCGGGTGGCCACGTCCATCACCTGCACCCGGTC  >  NC_002947/3058774‑3059069

tCGGCCAGGGTCTGGGTGCTGGTGTCGATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGgtg                                                                                                                                                     >  2:3608072/1‑150 (MQ=255)

 cGGCCAGGGTCTGGGTGCTGGTGTCGATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGgtg‑t                                                                                                                                                   <  1:318566/150‑1 (MQ=255)

 cGGCCAGGGTCTGGGTGCTGGTGTCGATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGgtg‑t                                                                                                                                                   <  1:2788075/150‑1 (MQ=255)

 cGGCCAGGGTCGGGGTGCTGGTGTCGATCCAGTGCAGCATGTTGGTGGTTGCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGgtg‑t                                                                                                                                                   <  2:1881582/150‑1 (MQ=255)

     cAGGGTCTGGGTGCTGGTGTCGATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGAt                                                                                                                                               >  1:834983/1‑150 (MQ=255)

     cAGGGTCTGGGTGCTGGTGTCGATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTAGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGAt                                                                                                                                               >  2:4414723/1‑150 (MQ=255)

          tCTGGGTGCTGGTGTCGATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCg                                                                                                                                          >  2:2975169/1‑150 (MQ=255)

          tCTGGGTGCTGGTGTCGATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCg                                                                                                                                          <  2:1010943/150‑1 (MQ=255)

              ggTGCTGGTGTCGATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCAc                                                                                                                                      <  2:1491893/150‑1 (MQ=255)

               gTGCTGGTGTCGATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTTGGTGACGGTGATCGA‑CACCGTCAcc                                                                                                                                     <  2:480798/150‑1 (MQ=255)

               gTGCTGGTGTCGATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTGATCGA‑CACCGTCAcc                                                                                                                                     <  1:3762198/150‑1 (MQ=255)

               gTGCTGGTGTCGATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTGATCGA‑CACCGTCAcc                                                                                                                                     <  1:1701033/150‑1 (MQ=255)

                 gCTGGTGTCGATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTGATCGA‑CACCGTCAccga                                                                                                                                   <  2:3431301/150‑3 (MQ=255)

                  cTGGTGTCGATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAgc                                                                                                                                  <  2:974832/150‑1 (MQ=255)

                   tGGTGTCGATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAgcg                                                                                                                                 >  2:2593135/1‑150 (MQ=255)

                   tGGTGTCGATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAgcg                                                                                                                                 >  1:4203652/1‑150 (MQ=255)

                   tGGTGTCGATCCAGTGCAGCATGTTGGTGGATTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑GCGATCACCGTCACCcgcg                                                                                                                                 >  2:4541650/1‑150 (MQ=255)

                     gtgtCGATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCa                                                                                                                               >  2:3122961/1‑150 (MQ=255)

                     gtgtCGATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCa                                                                                                                               >  2:479229/1‑150 (MQ=255)

                       gtCGATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATc                                                                                                                             <  2:834983/150‑1 (MQ=255)

                       gtCGATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATc                                                                                                                             >  2:1862843/1‑150 (MQ=255)

                       gtCGATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATc                                                                                                                             >  1:3310566/1‑150 (MQ=255)

                       gtCGATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATc                                                                                                                             >  1:1774705/1‑150 (MQ=255)

                          gATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTc                                                                                                                          <  2:2685581/150‑1 (MQ=255)

                          gATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTc                                                                                                                          <  2:2901263/150‑1 (MQ=255)

                          gATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TAGAAAACCCTCACCAGCCCAACGTc                                                                                                                          >  1:1295454/1‑150 (MQ=255)

                          gATCCAGAGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCTCCCACTTGCCGACGGGGCTGACCGCCATGCCTTCCGGTTCGATGCCGACTTCGATCTGCCCGAGCACCATGTCGCTGACGGTG‑ACGAACACCGTCACCAGCGCATCCTc                                                                                                                          <  2:3313548/150‑1 (MQ=255)

                           aTCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGCCCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTGGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTcc                                                                                                                         <  2:3299624/150‑1 (MQ=255)

                           aTCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTcc                                                                                                                         <  2:74194/150‑1 (MQ=255)

                            tCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCt                                                                                                                        <  1:1859273/150‑1 (MQ=255)

                              cAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCg                                                                                                                      <  2:4497685/150‑1 (MQ=255)

                                 tGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGttt                                                                                                                   <  2:1866448/150‑1 (MQ=255)

                                 tGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGttt                                                                                                                   <  2:5049719/150‑1 (MQ=255)

                                 tGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGttt                                                                                                                   <  1:2019058/150‑1 (MQ=255)

                                         gTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCAACGTCCTCGTTTTatacata                                                                                                           >  1:129668/1‑150 (MQ=255)

                                          ttGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGatacatac                                                                                                          >  2:2003934/1‑150 (MQ=255)

                                           tggtggTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGAtacataca                                                                                                         <  2:1443629/150‑1 (MQ=255)

                                           tggtggTTTCGATGGTGTTGACCGCCCACTTGCCGTCCGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGAtacataca                                                                                                         >  2:3188634/1‑150 (MQ=255)

                                               ggtTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGGTACATAcagcca                                                                                                     <  1:4528744/150‑1 (MQ=255)

                                                        ggTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGtt                                                                                            <  2:119265/150‑1 (MQ=255)

                                                         gtgtTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCGCCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTg                                                                                           <  1:3402448/150‑1 (MQ=255)

                                                          tgtTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTgg                                                                                          >  2:3776609/1‑150 (MQ=255)

                                                            ttGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑GCGATCAACCTCACCAGCGCAAAGTACACCTTTGATACAAAAATCCACCGGTCGTTtggg                                                                                        >  1:456399/1‑150 (MQ=255)

                                                              gACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTg                                                                                      >  2:5084082/1‑150 (MQ=255)

                                                               aCCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGc                                                                                     <  2:3579344/150‑1 (MQ=255)

                                                                 cGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCGTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAg                                                                                   >  2:3191708/1‑150 (MQ=255)

                                                                       cTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGaa                                                                             <  1:3193997/150‑1 (MQ=255)

                                                                        ttGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCTGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAAc                                                                            <  1:75015/150‑1 (MQ=255)

                                                                        ttGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAAc                                                                            <  1:1780498/150‑1 (MQ=255)

                                                                             gTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCGTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCCGGGCGAACTGCTc                                                                       >  1:2945531/1‑150 (MQ=255)

                                                                              tCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCg                                                                      >  2:4119337/1‑150 (MQ=255)

                                                                                ggggCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCggg                                                                    <  2:4287245/150‑1 (MQ=255)

                                                                                 gggCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTTGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCgggg                                                                   <  2:286535/150‑1 (MQ=255)

                                                                                 gggCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCgggg                                                                   <  1:2135336/150‑1 (MQ=255)

                                                                                   gCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTc                                                                 >  1:2806684/1‑150 (MQ=255)

                                                                                     tGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCt                                                               >  2:1947206/1‑150 (MQ=255)

                                                                                     tGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCGCGGGTGATACATACAGCCAGCGGTCGGTGGGGTGCAGGGCGAACGGCTCGGGGTccg                                                               >  1:971180/1‑149 (MQ=255)

                                                                                     tGACCGCCATGCCTTCGGGTTCGATGCCGACTCCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCt                                                               >  2:1947205/1‑150 (MQ=255)

                                                                                         cGCCATGCCTTCGGGTTCGATACCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGcc                                                           <  1:4963940/150‑1 (MQ=255)

                                                                                          gCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCg                                                          >  1:3776195/1‑150 (MQ=255)

                                                                                          gCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATAAATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGGCCTTGCCg                                                          >  1:299111/1‑150 (MQ=255)

                                                                                            cATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCCGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGa                                                        >  1:3170053/1‑150 (MQ=255)

                                                                                             aTGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGaa                                                       <  2:1575831/150‑1 (MQ=255)

                                                                                             aTGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGaa                                                       <  2:2750401/150‑1 (MQ=255)

                                                                                                 ctgcGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCAAGCGGACGTTGGGGTGCAGCGCGAACTGCTCGGGGTCCTTGCCGGAGGGCa                                                   >  1:398980/4‑150 (MQ=255)

                                                                                                  ttCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCaa                                                  >  2:3919899/1‑150 (MQ=255)

                                                                                                  ttCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCaa                                                  >  2:1896488/1‑150 (MQ=255)

                                                                                                   tCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAAc                                                 <  1:4027561/150‑1 (MQ=255)

                                                                                                    cGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACt                                                >  2:764879/1‑150 (MQ=255)

                                                                                                       gTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCt                                             <  2:58665/150‑1 (MQ=255)

                                                                                                          cGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTtga                                          <  1:1555504/150‑1 (MQ=255)

                                                                                                               ccGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATc                                     <  2:4981579/150‑1 (MQ=255)

                                                                                                               ccGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATc                                     <  2:1295454/150‑1 (MQ=255)

                                                                                                                cGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCCACTCCGTGATGATCt                                    >  2:1786023/1‑150 (MQ=255)

                                                                                                                  aCTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCTTg                                  <  2:3028386/150‑1 (MQ=255)

                                                                                                                    ttCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCTTGCg                                >  1:697507/1‑150 (MQ=255)

                                                                                                                    ttCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCTTGCg                                >  2:171443/1‑150 (MQ=255)

                                                                                                                     tCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCTTGCgg                               <  1:4497592/150‑1 (MQ=255)

                                                                                                                      cGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCTTGCggg                              <  1:3853660/150‑1 (MQ=255)

                                                                                                                       gATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCTTGCGGGt                             <  2:2347449/150‑1 (MQ=255)

                                                                                                                        aTCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCTTGCGGGTg                            <  1:1208889/150‑1 (MQ=255)

                                                                                                                         tCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCTTGCGGGTgg                           <  2:2363646/150‑1 (MQ=255)

                                                                                                                         tCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCTTGCGGGTgg                           <  2:4791058/150‑1 (MQ=255)

                                                                                                                            gCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTACTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCTTGCGGGTGGCCa                        <  1:3261326/150‑1 (MQ=255)

                                                                                                                            gCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGGTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCTTGCGGGTGGCCa                        >  2:123725/1‑150 (MQ=255)

                                                                                                                             cccGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCTTGCGGGTGGCCAc                       >  1:410738/1‑150 (MQ=255)

                                                                                                                              ccGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCACCGCAGCGTCCGCGGTTGATAAATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACGGCTCGGGGTCCTTGCCGGAAGGCAACACCATGATGATCTTGCGGGTGGCCCCg                      >  1:209205/1‑150 (MQ=255)

                                                                                                                                gAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCTTGCGGGTGGCCACGTc                    <  1:4857009/150‑1 (MQ=255)

                                                                                                                                      cTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCTTGCGGGTGGCCACGTCCATCAc              >  1:3648831/1‑150 (MQ=255)

                                                                                                                                       ttGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCTTGCGGGTGGCCACGTCCATCAcc             >  2:1649692/1‑150 (MQ=255)

                                                                                                                                       ttGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCTTGCGGGTGGCCACGTCCATCAcc             <  1:832289/150‑1 (MQ=255)

                                                                                                                                       ttGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCTTGCGGGTGGCCACGTCCATCAcc             >  1:3567669/1‑150 (MQ=255)

                                                                                                                                           tggTGACGGTGATCGA‑CACCGTCACCGGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCTTGCGGGTGGCCACGTCCATCACCTGCa         >  2:2771074/2‑150 (MQ=255)

                                                                                                                                           tggTGACGGTGATCGA‑CACCGTCACCGGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACAGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCTTGCGGGTGGCCACGTCCATCACCTGCa         >  1:1073389/2‑150 (MQ=255)

                                                                                                                                           tggTGACGGTGATCGA‑CACCGTCACCGGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACAGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCTTGCGGGTGGCCACGTCCATCACCTGCa         >  1:1073408/2‑150 (MQ=255)

                                                                                                                                             gTGACGGTGATCGA‑CACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCTTGCGGGTGGCCACGTCCATCACCTGCAcc       >  1:4348861/1‑150 (MQ=255)

                                                                                                                                              tGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCTTGCGGGTGGCCACGTCCATCACCTGCAccc      >  1:3607483/1‑150 (MQ=255)

                                                                                                                                              tGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCTTGCGGGTGGCCACGTCCATCACCTGCAccc      >  1:2189038/1‑150 (MQ=255)

                                                                                                                                               gACGGTGATCGA‑CACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCTTGCGGGTGGCCACGTCCATCACCTGCACCCg     >  1:2773002/1‑150 (MQ=255)

                                                                                                                                                  ggTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCTTGCGGGTGGCCACGTCCATCACCTGCACCCGGTc  <  1:4676873/150‑1 (MQ=255)

TCGGCCAGGGTCTGGGTGCTGGTGTCGATCCAGTGCAGCATGTTGGTGGTTTCGCTGGTGTTGACCGCCCACTTGCCGTCGGGGCTGACCGCCATGCCTTCGGGTTCGATGCCGACTTCGATCTGCCCGAGCACCTTGTCGGTGACGGTG‑TCGATCACCGTCACCAGCGCATCGTCCTCGTTTGATACATACAGCCAGCGGTCGTTGGGGTGCAGGGCGAACTGCTCGGGGTCCTTGCCGGAAGGCAACTCCTTGATGATCTTGCGGGTGGCCACGTCCATCACCTGCACCCGGTC  >  NC_002947/3058774‑3059069

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`