| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,241,968:1 | +T | 8.6% | intergenic (+27/+31) | grxD → / ← bfr‑II | monothiol glutaredoxin/bacterioferritin |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,241,968 | 1 | . | T | 8.6% | 552.8 / 47.2 | 139 | intergenic (+27/+31) | grxD/bfr‑II | monothiol glutaredoxin/bacterioferritin |
| Reads supporting (aligned to +/- strand): ref base . (65/62); new base T (5/7); total (70/69) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.62e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 141 total aligned reads displayed.
AACTGTGGGTAGCCGGTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAGGATATCTTCGAG > NC_002947/1241820‑1242115 | aaCTGTGGGTAGCCGGTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCcgc‑g < 1:3519653/150‑1 (MQ=255) gggTAGCCGGTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGc < 2:1839891/150‑1 (MQ=255) gTAGCCGGTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCgg > 2:4568510/1‑150 (MQ=255) gTAGCCGGTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCgg < 2:4640967/150‑1 (MQ=255) gCCGGTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑tt < 2:4931006/150‑1 (MQ=255) ggTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGCTGATC‑GCGGG‑ttttt < 1:1602073/150‑1 (MQ=255) ggTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGCTGATC‑GCGGG‑ttttt < 1:1602108/150‑1 (MQ=255) ggTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGCTGATC‑GCGGG‑ttttt < 1:1602332/150‑1 (MQ=255) tGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGCTGATC‑GCGGG‑ttttttt < 2:2824857/150‑1 (MQ=255) tGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑ttttttt < 1:1021063/150‑1 (MQ=255) gAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTa < 1:2706589/150‑1 (MQ=255) gAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTa > 1:1890857/1‑150 (MQ=255) aGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGCTGATC‑GCGGG‑TTTTTTTAt < 1:3711623/150‑1 (MQ=255) ggTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCAT‑AAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGc > 2:1751695/1‑150 (MQ=255) gTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGCTGATC‑GCGGG‑TTTTTTTATgcttg < 2:3324574/150‑5 (MQ=39) gTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGc > 1:700716/1‑150 (MQ=255) gTTGGCGGCAGCGACATCATGCGGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGc < 2:732715/150‑1 (MQ=255) ttGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCg > 2:2169574/1‑150 (MQ=255) cggcAGCGACATCATGCTGGAAATGTTCGAGGAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATa < 1:5040851/150‑1 (MQ=255) gcAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGt < 2:522584/150‑1 (MQ=255) aGCGACATCATGCTGGAAATGTTCGAGACGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTa < 2:379225/150‑1 (MQ=255) aGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTa < 1:2032632/150‑1 (MQ=255) aGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTa < 2:2980276/150‑1 (MQ=255) gCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTAc < 1:3959349/150‑1 (MQ=255) cGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTAct < 2:1181002/150‑1 (MQ=255) aCATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTActct < 1:4983649/150‑1 (MQ=255) aCATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTActct < 2:1725974/150‑1 (MQ=255) atcatGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTc < 1:3819194/150‑1 (MQ=255) atcatGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTc < 1:1235453/150‑1 (MQ=255) atGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCATCGcc > 1:1383365/1‑150 (MQ=255) cTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCAt < 1:717063/150‑1 (MQ=255) cTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAAGAGTAACTATTCGcccca < 1:974636/150‑3 (MQ=255) ggAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCt > 1:3268672/1‑150 (MQ=255) ttCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTg < 1:894341/150‑1 (MQ=255) tCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGc < 2:2802436/150‑1 (MQ=255) gagaAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAg < 1:4687618/150‑1 (MQ=255) aaGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTa < 2:3829586/150‑1 (MQ=255) ggTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGtt > 2:4725709/1‑150 (MQ=255) ggTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTGTGTGGGGCGAAGAGTTACTCTTCGCCCATCGGCGACGGCAGGGAggg > 2:2884452/1‑148 (MQ=255) cTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGAt > 1:3274642/1‑150 (MQ=255) gCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATAc > 1:541578/1‑150 (MQ=255) ccTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAATCCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCCGGTAGTTCTCGATACCgcgct > 1:2652932/1‑146 (MQ=255) ccTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCGTCGCCCATCTGCGACTGCAGGTAGTTCTCGAAACCGATCt > 2:476047/1‑150 (MQ=255) aTCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGACCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTc > 1:945527/1‑150 (MQ=255) cAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGa > 1:1041193/1‑150 (MQ=255) cAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTCCTCGATACCGATCTTGTCGa < 1:1440448/150‑1 (MQ=255) aaGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGAt > 1:14454/1‑150 (MQ=255) ggACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCa > 2:371283/1‑150 (MQ=255) gACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCTGCAAGCATAAAAAAACCCGC‑GATCAGCGCC‑TTTTTTTATGGGGCGAATAGATACTCTTCGCCCCTCTGCGAAAGCAGGTAGTTCTCGATAACGATCTTGTCGAGCAg > 2:295616/1‑150 (MQ=255) gACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAg > 1:3230543/1‑150 (MQ=255) gACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTGGTCGATCAg > 2:2282159/1‑150 (MQ=255) gACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGGAGTTCTCGATACCGATCTTGTCGATCAg > 1:1554911/1‑150 (MQ=255) gcgGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGcc < 2:3413147/150‑1 (MQ=255) ggCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCa > 1:2501898/1‑150 (MQ=255) gCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGCTCAGCCCCAg > 1:819390/1‑150 (MQ=255) gCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAg > 1:819345/1‑150 (MQ=255) tGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGtt > 2:2195663/1‑150 (MQ=255) gccaaggccaagGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTg < 1:2721334/150‑1 (MQ=255) caaggccaaggcTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCCGCCCCAGTgggg > 2:4509346/1‑150 (MQ=255) caaggccaaggcTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTggg > 1:243254/1‑150 (MQ=255) aaggccaaggcTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGt > 2:3495404/1‑150 (MQ=255) aggccaaggcTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGtt < 1:647297/150‑1 (MQ=255) caaggcTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTcca < 1:1613077/150‑1 (MQ=255) aaggcTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCCGTTGGGTTTccag > 2:790336/1‑150 (MQ=255) gcTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTccagcca < 1:1923334/150‑1 (MQ=255) gcTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTccagcca < 2:2500132/150‑1 (MQ=255) gcTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTccagcca < 2:2500181/150‑1 (MQ=255) gcTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTccagcca < 2:4328291/150‑1 (MQ=255) gcTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGAGACCGATCTTGTCGATCAGCCCCAGGTGGGTTTccagcca < 2:4328370/150‑1 (MQ=255) tGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGa > 1:1953857/1‑150 (MQ=255) gAAGCCTGATCTTCCGGCAATCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATATTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGACGAt < 2:458077/150‑1 (MQ=255) gAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGAt < 1:3819321/150‑1 (MQ=255) gAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GAGCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGAt < 2:3368688/150‑1 (MQ=255) aaGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCCGTTGGGTTTCCAGCCAGTCGAtg > 2:4050584/1‑150 (MQ=255) aaGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGAtg > 2:4050512/1‑150 (MQ=255) aGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGAtgt > 1:5097439/1‑150 (MQ=255) gCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGAtgtg < 1:4321419/150‑1 (MQ=255) tGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGctc < 2:700716/150‑1 (MQ=255) ttCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCt > 2:3508603/1‑150 (MQ=255) gCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGAc < 1:3071170/150‑1 (MQ=255) ccccATAAAAAAACCCGCTGATC‑GCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTc > 2:4221324/4‑150 (MQ=255) aaGCATAACAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTc < 2:3012143/150‑1 (MQ=255) aaGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTc < 1:140768/150‑1 (MQ=255) aaGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTc > 1:3318714/1‑150 (MQ=255) aTAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAgg > 1:4845067/1‑150 (MQ=255) aTAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGAGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAgg > 1:4845018/1‑150 (MQ=255) tAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTgg > 2:1900421/1‑110 (MQ=255) aaaaatCCCGCTGATC‑GCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAGGata > 2:861441/1‑150 (MQ=255) aaaaaaCCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAGGata > 1:4366015/1‑150 (MQ=255) aaaaaaCCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAGGata > 1:1839564/1‑150 (MQ=255) aaaaaCCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTg > 2:1546730/1‑89 (MQ=255) aaaaaCCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCGTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGATCTTCCTCGGACTCGAGGatag > 2:3668596/1‑149 (MQ=255) aaCCCGCTGATC‑GCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAGGATATCtt > 1:95212/1‑150 (MQ=255) aCCCGC‑GATCAGCGTG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGCTCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAGGATATCTTc < 1:1090508/150‑1 (MQ=255) aCCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAGGATATCTTc < 1:2714832/150‑1 (MQ=255) ccGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAGGATATCTTCGa > 1:963152/1‑150 (MQ=255) ccGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAGGATATCTTCGa > 1:963144/1‑150 (MQ=255) ccGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAGGATATCTTCGa > 2:307578/1‑150 (MQ=255) ccGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAGGATATCTTCGa < 1:239002/150‑1 (MQ=255) cgc‑gATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAGGATATCTTCGAg > 2:2699668/1‑150 (MQ=255) | AACTGTGGGTAGCCGGTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGG‑TTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAGGATATCTTCGAG > NC_002947/1241820‑1242115 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |