| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 81061 | 162 (1.060) | 12 (0.080) | 3/256 | NT | 9.8% | intergenic (+118/‑16) | tsaC/PP_5425 | threonylcarbamoyl‑AMP synthase/hypothetical protein |
| ? | NC_002947 | = 2238889 | 71 (0.500) | intergenic (+19/+109) | uvrB/PP_1975 | uvrABC excinuclease protein B/EmrB/QacA family drug resistance transporter | |||||
TCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/80904‑81061‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccACAGGGCCCGCGCCCGGCTTCAGCTGCTGATCAACCGCTCCCGCAGCTGCGCAATCTCGTCACGCAACTGCGCCGCAGCTTCGAACTCCAGGTCGCGGGCGAACTGCATCATTTTCTCTTCCAACTGCTTGATGCGCTTGGTGATCTCG < NC_002947/2238889‑2238741 TCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCACGCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATCCAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGC < 1:4150201/150‑1TCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGC < 2:4859631/150‑1TCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGC < 1:2881895/150‑1 GCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC < 2:3883301/150‑1 GCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC > 2:1986113/1‑150 GCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCC > 1:3266479/1‑150 CTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCC > 2:2571441/1‑150 gggCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCGCCCACAGGGCCCGCGCCCGGCTTCAGCTGCTGATCAACCGCTCCCGCAGCTGCGCAATCTCGTCA > 2:1971478/4‑150 CGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGCCCGCGCCCGGCTTCAGCTGCTGATCAACCGCTCCCGCAGCTGCGCAATCTCGTCACGCAACTGCGCCGC > 1:369541/1‑150 gtGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGCCCGCGCCCGGCTTCAGCTGCTGATCAACCGCTCCCGCAGCTGCGCAATCTCGTCACGCAACTGCGCCGCAGCTT > 1:4970970/3‑150 tGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGCCCGCGCCCGGCTTCAGCTGCTGATCAACCGCTCCCGCAGCTGCGCAATCTCGTCACGCAACTGCGCCGCAGCTTC > 2:4407064/2‑150 CCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCGCCCGGCTTCAGCTGCTGATCAACCGCTCCCGCAGCTGCGCAATCTCGTCACGCAACTGCGCCGCAGCTTCGAA > 1:354769/1‑150 CCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGGGCCCGCGCCCGGCTTCAGCTGCTGATCAACCGCTCCCGCAGCTGCGCAATCTCGTCACGCAACTGCGCCGCAGCTTCGAA > 1:3557572/1‑150 GCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCGCCCGGCTTCAGCTGCTGATCAACCGCTCCCGCAGCTGCGCAATCTCGTCACGCAACTGCGCCGCAGCTTCGAACT > 1:1038628/1‑150 GCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCGCCCGGCTTCAGCTGCTGATCAACCGCTCCCGCAGCTGCGCAATCTCGTCACGCAACTGCGCCGCAGCTTCGAACT > 1:1038627/1‑150 GCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCGCCCGGCTTCAGCTGCTGATCAACCGCTCCCGCAGCTGCGCAATCTCGTCACGCAACTGCGCCGCAGCTTCGAACT > 1:1038741/1‑150 GCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCGCCCGGCTTCAGCTGCTGATCAACCGCTCCCGCAGCTGCGCAATCTCGTCACGCAACTGCGCCGCAGCTTCGAACT > 1:26248/1‑150 ctGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGCCCGCGCCCGGCTTCAGCTGCTGATCAACCGCTCCCGCAGCTGCGCAAACTCGTCACGCAACTGCGCCGCACCTTCGAACTCCAGGTCGCGGGCGAACTGCA > 1:4130126/3‑150 TTCGCGGGCATGCCCGCTCCCACAGGGACCGCGCCCGGCTTCAGCTGCTGATCAACCGCTCCCGCAGCTGCGCAATCTCGTCACGCAACTGCGCCGCAGCTTCGAACTCCAGGTCGCGGGCGAACTGCATCATTTTCTCTTCCAACTGCT < 2:354769/150‑1 GCCCGCTCCCACAGGGCCCGCGCCCGGCTTCAGCTGCTGATCAACCGCTCCCGCAGCTGCGCAATCTCGTCACGCAACTGCGCCGCAGCTTCGAACTCCAGGTCGCGGGCGAACTGCATCATTTTCTCTTCCAACTGCTTGATGCGCTTG > 1:558592/1‑150 CCCGCTCCCACAGGGCCCGCGCCCGGCTTCAGCTGCTGATCAACCGCTCCCGCAGCTGCGCAATCTCGTCACGCAACTGCGCCGCAGCTTCGAACTCCAGGTCGCGGGCGAACTGCATCATTTTCTCTTCCAACTGCTTGATGCGCTTGG < 1:2932228/150‑1 CCCGCTCCCACAGGGCCCGCGCCCGGCTTCAGCTGCTGATCAACCGCTCCCGCAGCTGCGCAATCTCGTCACGCAACTGCGCCGCAGCTTCGAACTCCAGGTCGCGGGCGAACTGCATCATTTTCTCTTCCAACTGCTTGATGCGCTTGG < 1:2932223/150‑1 CCCGCTCCCACAGGGCCCGCGCCCGGCTTCAGCTGCTGATCAACCGCTCCCGCAGCTGCGCAATCTCGTCACGCAACTGCGCCGCAGCTTCGAACTCCAGGTCGCGGGCGAACTGCATCATTTTCTCTTCCAACTGCTTGATGCGCTTGG < 2:2549588/150‑1 CCCGCTCCCACAGGGCCCGCGCCCGGCTTCAGCTGCTGATCAACCGCTCCCGCAGCTGCGCAATCTCGTCACGCAACTGCGCCGCAGCTTCGAACTCCAGGTCGCGGGCGAACTGCATCATTTTCTCTTCCAACTGCTTGATGCGCTTGG < 1:1335695/150‑1 CCGCTCCCAAAGGGCCCGCGCCCGGCTTCAGCTGCTGATCAACCGCTCCCGCAGCTGCGCAATCTCGTCACGCAACTGCGCCGCAGCTTCGAACTCCAGGTCGCGGGCGAACTGCATCATTTTCTCTTCCAACTGCTTGATGCGCTTGGT < 1:851833/150‑1 CTCCCACAGGGCCCGCGCCCGGCTTCAGCTGCTGATCAACCGCTCCCGCAGCTGCGCAATCTCGTCACGCAACTGCGCCGCAGCTTCGAACTCCAGGTCGCGGGCGAACTGCATCATTTTCTCTTCCAACTGCTTGATGCGCTTGGTGAT < 2:2398103/150‑1 TCCCACAGGGCCCGCGCCCGGCTTCAGCTGCTGATCAACCGCTCCCGCAGCTGCGCAATCTCGTCACGCAACTGCGCCGCAGCTTCGAACTCCAGGTCGCGGGCGAACTGCATCATTTTCTCTTCCAACTGCTTGATGCGCTTGGTGATC < 2:3247573/150‑1 CCACAGGGCCCGCGCCCGGCTTCAGCTGCTGATCAACCGCTCCCGCAGCTGCGCAATCTCGTCACGCAACTGCGCCGCAGCTTCGAACTCCAGGTCGCGGGCGAACTGCATCATTTTCTCTTCCAACTGCTTGATGCGCTTGGTGATCTC > 2:3514875/1‑150 CCACAGGGCCCGCGCCCGGCTTCAGCTGCTGATCAACCGCTCCCGCAGCTGCGCAATCTCGTCACGCAACTGCGCCGCAGCTTCGAACTCCAGGTCGCGGGCGAACTGCATCATTTTCTCTTCCAACTGCTTGATGCGCTTGGTGATCTC > 2:3514935/1‑150 CCACAGGGCCCGCGCCCGGCTTCAGCTGCTGATCAACCGCTCCCGCAGCTGCGCAATCTCGTCACGCAACTGCGCCGCAGCTTCGAACTCCAGGTCGCGGGCGAACTGCATCATTTTCTCTTCCAACTGCTTGATGCGC > 2:439106/1‑139 CCACAGGGCCCGCGCCCGGCTTCAGCTGCTGATCAACCGCTCCCGCAGCTGCGCAATCTCGTCACGCAACTGCGCCGCAGCTTCGAACTCCAGGTCGCGGGCGAACTGCATCATTTTCTCTTCCAACTGCTTGATGCGC < 1:439106/139‑1 CACAGGGCCCGCGCCCGGCTTCAGCTGCTGATCAACCGCTCCCGCAGCTGCGCAATCTCGTCACGCAACTGCGCCGCAGCTTCGAACTCCAGGTCGCGGGCGAACTGCATCATTTTCTCTTCCAACTGCTTGATGCGCTTGGTGATCTCG > 2:1418870/1‑150 CACAGGGCCCGCGCCCGGCTTCAGCTGCTGATCAACCGCTCCCGCAGCTGCGCAATCTCGTCACGCAACTGCGCCGCAGCTTCGAACTCCAGGTCGCGGGCGAACTGCATCATTTTCTCTTCCAACTGCTTGATGCGCTTGGTGATCTCG < 2:2184016/150‑1 TCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/80904‑81061‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccACAGGGCCCGCGCCCGGCTTCAGCTGCTGATCAACCGCTCCCGCAGCTGCGCAATCTCGTCACGCAACTGCGCCGCAGCTTCGAACTCCAGGTCGCGGGCGAACTGCATCATTTTCTCTTCCAACTGCTTGATGCGCTTGGTGATCTCG < NC_002947/2238889‑2238741 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |