| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 86750 = | 71 (0.470) | 13 (0.100) | 9/244 | NT | 16.5% | intergenic (‑33/+112) | PP_0075/PP_0076 | choline sulfate transporter/choline betaine‑binding protein |
| ? | NC_002947 | 86841 = | 69 (0.510) | intergenic (‑124/+21) | PP_0075/PP_0076 | choline sulfate transporter/choline betaine‑binding protein | |||||
CCACCAAGGCCGATGGGGATGCCCTGGAGGCCGTCAAAGCCAAACTGTAATCTCACAAAGCAACACACCAACCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/86911‑86750‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccacaggg‑TTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCAGGATGCGCTTTCACCCAGGCCTTGGCCGCTTCATCGAAGCTGATCT > NC_002947/86841‑86989 CCACCAAGGCCGATGGGGATGCCCTGGAGGCCGTCAAAGCCAAACTGTAATCTCACAAAGCAACACACCAACCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCC > 2:3219281/1‑150CCACCAAGGCCGATGGGGATGCCCTGGAGGCCGTCAAAGCCAAACTGTAATCTCACAAAGCAACACACCAACCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCC > 1:3960150/1‑150CCACCAAGGCCGATGGGGATGCCCTGGAGGCCGTCAAAGCCAAACTGTAATCTCACAAAGCAACACACCAACCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCGTTTTCGCGGGCATGCCC > 2:1833301/1‑150 CAAGGCCGATGGGGATGCCCTGGAGGCCGTCAAAGCCAAACTGTAATCTCACAAAGCAACACACCAACCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTC > 1:2045612/1‑150 GGCCGATGGGGATGCCCTGGAGGCCGTCAACGCCAAAATGTAATCTCACAAAGCAACCCACCAACCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCgaaaa < 2:4598351/150‑6 tATGGGGATGCCCTGGAGGCCGTCAAAGCCAAACTGTAATCTCACAAAGCAACACACCAACCCTGTGGGATCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGG > 2:3464820/2‑150 GATGGGGATGCCCTGGAGGCCGTCAAAGCCAAACTGTAATCTCACAAAGCAACACACCACCCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGG < 2:700265/150‑1 ACACCAACCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGG‑CTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCA > 2:351221/1‑150 GGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGG‑TTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCT > 2:612513/1‑150 GGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGG‑TTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTG < 1:2542583/148‑1 GGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGG‑TTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTG > 2:2542660/1‑148 GGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGG‑TTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTG > 2:2542583/1‑148 GGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGG‑TTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTG < 1:2542660/148‑1 GCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGG‑TTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTA > 2:1738620/1‑150 CCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCGCGCCCGCTCCCACAGGG‑TTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCAACGGCCTTGGTGGTAACTCCG > 1:1463680/1‑150 CCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGGCTTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCC > 1:5110429/1‑150 CCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGGCTTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCC > 1:5110426/1‑150 AACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCGCGCCCGCTCCCACAGGG‑TTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAA > 2:2083070/1‑150 GCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGG‑TTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCA > 1:1635997/1‑150 TTTTCGCGGGCATGCCCGCTCCCACAGGG‑TTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCAGGATGCGCTTTCACCCAG < 1:612513/150‑1 GCCCGCTCCCACAGGG‑TTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCAGGATGCGCTTTCACCCAGGCCTTGGCCGCTT > 2:3353873/1‑150 CGCTCCCACAGGG‑TTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCAGGATGCGCTTTCACCCAGGCCTTGGCCGCTTCAT < 2:190694/150‑1 CGCTCCCACAGGG‑TTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCAGGATGCGCTTTCACCCAGGCCTTGGCCGCTTCAT < 1:1738620/150‑1 CACAGGG‑TTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCAGGATGCGCTTTCACCCAGGCCTTGGCCGCTTCATCGAAGC > 1:4853426/1‑150 ACAGGG‑TTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCAGGATGCGCTTTCACCCAGGCCTTGGCCGCTTCATCGAAGCT > 2:1868046/1‑150 ACAGGG‑TTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCAGGATGCGCTTTCACCCAGGCCTTG > 1:4915339/1‑133 ACAGGG‑TTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCAGGATGCGCTTTCACCCAGGCCTTG < 2:4915339/133‑1 AGGG‑TTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCAGGATGCGCTTTCACCCAGGCCTTGGCCGCTTCATCGAAGCTGA < 1:4178072/150‑1 G‑TTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCAGGATGCGCTTTCACCCAGGCCTTGGCCGCTTCATCGAAGCTGATCT > 2:2723964/1‑150 CCACCAAGGCCGATGGGGATGCCCTGGAGGCCGTCAAAGCCAAACTGTAATCTCACAAAGCAACACACCAACCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/86911‑86750‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccacaggg‑TTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCAGGATGCGCTTTCACCCAGGCCTTGGCCGCTTCATCGAAGCTGATCT > NC_002947/86841‑86989 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |