| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 507013 = | 138 (0.910) | 10 (0.070) | 6/248 | NT | 7.4% | intergenic (+22/+111) | trpE/estP | anthranilate synthase component 1/esterase EstP |
| ? | NC_002947 | 507103 = | 126 (0.920) | intergenic (+112/+21) | trpE/estP | anthranilate synthase component 1/esterase EstP | |||||
GATGAGTTGACGCAACAGGGTATTAGCGTGGGGGTTAGCGTGGACTTCTGAATTGCTGGGGGCCGCTTTGCGGCCCATTCGCGGGTGAACCCGCTCCTACGACGGCCTCGTATGCCTGAGGCTTGCGCAACCTTGTAGGAGCGGGTTTACCCGCGAATGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/507174‑507013‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acccgcgaatgggcCGCAAAGCGGCCCCCAGCAATTCAGAAGTCCACGCTAACCCCC‑ACGCTAATACCCTGTTGCGTCAACTCATCACTCTTGCGCCAGTTGTAGTTCCCGCGCAAATGCACCCCTGCCACCAGTTCATGGCTCACACCCAGGCTCGCCCGGG > NC_002947/507103‑507251 GATGAGTTGACGCAACAGGGTATTAGCGTGGGGGTTAGCGTGGACTTCTGAATTGCTGGGGGCCGCTTTGCGGCCCATTCGCGGGTGAACCCGCTCCTACGACGGCCTCGTATGCCTGAGGCTTGCGCAACCTTGTAGGAGCGGGTTTAC > 1:2105543/1‑150GATGAGTTGACGCAACAGGGTATTAGCGTGGGGGTTAGCGTGGACTTCTGAATTGCTGGGGGCCGCTTTGCGGCCCATTCGCGGGTGAACCCGCTCCTACGACGGCCTCGTATGCCTGAGGCTTGCGCAACCTTGTAGGAGCGGGTTTAC > 2:1942190/1‑150GATGAGTTGACGCAACAGGGTATTAGCGTGCGGGTTAGCGTGGACTTCTGAATTGCTGGGGGCCGCTTTGCGGCCCATTCGCGGGTGAACCCGCTCCTACGACGGCCTCGTATGCCTGAGGCTTGCGCAACCTTGTAGGAGCGGGTTTAC > 2:2012311/1‑150 ATGAGTTGACGCAACAGGGTATTAGCGTGGGGGTTAGCGTGGACTTCTGAATTGCTGGGGGCCGCTTTGCGGCCCATTCGCGGGTGAACCCGCTCCTACGACGGCCTCGTATGCCTGAGGCTTGCGCAACCTTGTAGGAGCGGGTTTACC > 1:2667644/1‑150 TGAGTTGACGCAACAGGGTATTAGCGTGGGGGTTAGCGTGGACTTCTGAATTGCTGGGGGCCGCTTTGCGGCCCATTCGCGGGTGAACCCGCTCCTACGACGGCCTCGTATGCCTGAGGCTTGCGCAACCTTGTAGGAGCGGGTTTACCC > 2:3117210/1‑150 TGAGTTGACGCAACAGGGTATTAGCGTGGGGGTTAGCGTGGACTTCTGAATTGCTGGGGGCCGCTTTGCGGCCCATTCGCGGGTGAACCCGCTCCTACGACGGCCTCGTATGCCTGAGGCTTGCGCAACCTTGTAGGAGCGGGTTTACCC < 2:1455027/150‑1 TGAGTTGACGCAACAGGGTATTAGCGTGGGGGTTAGCGTGGACGTCTGAATTGCTGGGGGCCGCTTTGCGGCCCATTCGCGGGTGAACCCGCTCCTACGACGGCCTCGTATGCCTGAGGCTTGCGCAACCTTGTAGGAGCGGGTTTACCC > 2:3117207/1‑150 AGTTGACGCAACAGGGTATTAGCGTGGGGGTTAGCGTGGACTTCTGAATTGCTGGGGGCCGCTTTGCGGCCCATTCGCGGGTGAACCCGCTCCTACGACGGCCTCGTATGCCTGAGGCTTGCGCAACCTTGTAGGAGCGGGTTTACCCGC < 2:2205769/150‑1 AGTTGACGCAACAGGGTATTAGCGTGGGGGTTAGCGTGGACTTCTGAATTGCTGGGGGCCGCTTTGCGGCCCATTCGCGGGTGAACCCGCTCCTACGACGGCCTCGTATGCCTGAGGCTTGCGCAACCTTGTAGGAGCGGGTTTACCCGC < 2:217673/150‑1 AGTTGACGCAACAGGGTATTAGCGTGGGGGTTAGCGTGGACTTCTGAATTGCTGGGGGCCGCTTTGCGGCCCATTCGCGGGTGAACCCGCTCCTACGACGGCCTCGTATGCCTGAGGCTTGCGCAACCTTGTAGGAGCGGGTTTACCCGC < 2:217602/150‑1 GTTGACGCAACAGGGTATTAGCGTGGGGGTTAGCGTGGACTTCTGAATTGCTGGGGGCCGCTTTGCGGCCCATTCGCGGGTGAACCCGCTCCTACGACGGCCTCGTATGCCTGAGGCTTGCGCAACCTTGTAGGAGCGGGTTTACCCGCG > 2:792638/1‑150 TTGACGCAACAGGGTATTAGCGTGGGGGTTAGCGTGGACTTCTGAATTGCTGGGGGCCGCTTTGCGGCCCATTCGCGGGTGAACCCGCTCCTACGACGGCCTCGTATGCCTGAGGCTTGCGCAACCTTGTAGGAGCGGGTTTACCCGCGA > 2:223019/1‑150 TTGACGCAACAGGGTATTAGCGTGGGGGTTAGCGTGGACTTCTGAATTGCTGGGGGCCGCTTTGCGGCCCATTCGCGGGTGAACCCGCTCCTACGACGGCCTCGTATGCCTGAGGCTTGCGCAACCTTGTAGGAGCGGGTTTACCCGCGA > 2:222968/1‑150 ACGCAACAGGGTATTAGCGTGGGGGTTAGCGTGGACTTCTGAATTGCTGGGGGCCGCTTTGCGGCCCATTCGCGGGTGAACCCGCTCCTACGACGGCCTCGTATGCCTGAGGCTTGCGCAACCTTGTAGGAGCGGGTTTACCCGCGAATG < 2:4386377/150‑1 ACGCAACAGGGTATTAGCGTGGGGGTTAGCGTGGACTTCTGAATTGCTGGGGGCCGCTTTGCGGCCCATTCGCGGGTGAACCCGCTCCTACGACGGCCTCGTATGCCTGAGGCTTGCGCAACCTTGTAGGAGCGGGTTTACCCGCGAATG < 1:3117206/150‑1 GCAACAGGGTATTAGCGTGGGGGTTAGCGTGGACTTCTGAATTGCTGGGAGCCGCTTTGCGGCCCATTCGCGGGTGAACCCGCTCCTACGACGGCCTCGTATGCCTGAGGCTTGCGCAACCTTGTAGGAGCGGGTTTACCCGCGAATGGG > 1:2153327/1‑150 GCAACAGGGTATTAGCGTGGGGGTTAGCGTGGACTTCTGAATTGCTGGGAGCCGCTTTGCGGCCCATTCGCGGGTGAACCCGCTCCTACGACGGCCTCGTATGCCTGAGGCTTGCGCAACCTTGTAGGAGCGGGTTTAACCCCGAATGGG > 1:2153361/1‑150 TTCGCGGGTGAACCCGCTCCTACGACGGCCTCGTATGCCTGAGGCTTGCGCAACCTTGTAGGAGCGGGTTTACCCGCGAATGGGCCGCAAAGCGGCCCCCAGCAATTCAGAAGTCCACGCTAACCCCC‑ACGCTAATACCCTGTTGCGTCA > 2:4058757/1‑150 CCCGCTCCTACGACGGCCTCGTATGCCTGAGGCTTGCGCAACCTTGTAGGAGCGGGTTTACCCGCGAATGGGCCGCAAAGCGGCCCCCAGCAATTCAGAAGTCCACGCTAACCCCC‑ACGCTAATACCCTGTTGCGTC < 2:3256220/137‑1 CCCGCTCCTACGACGGCCTCGTATGCCTGAGGCTTGCGCAACCTTGTAGGAGCGGGTTTACCCGCGAATGGGCCGCAAAGCGGCCCCCAGCAATTCAGAAGTCCACGCTAACCCCC‑ACGCTAATACCCTGTTGCGTC > 1:3256220/1‑137 CCGCTCCTACGACGGCCTCGTATGCCTGAGGCTTGCGCAACCTTGTAGGAGCGGGTTTACCCGCGAATGGGCTGCAAAGCGGCCCCCAGCAATTCAGAAGTCCACGCTAACCCCC‑ACGCTAATACCCTGTTGCGTCAACTCAACACTCTT > 1:4541627/1‑150 CCGCTCCTACGACGGCCTCGTATGCCTGAGGCTTGCGCAACCTTGTAGGAGCGGGTTTACCCGCGAATGGGCCGCAAAGCGGCCCCCAGCAATTCAGAAGTCCACGCTAACCCCC‑ACGCTAATACCCTGTTGCGTCAACTCATCACTCTT > 1:3745565/1‑150 GCTCCTACGACGGCCTCGTATGCCTGAGGCTTGCGCAACCTTGTAGGAGCGGGTTTACCC > 1:3710729/1‑60 GCTCCTACGACGGCCTCGTATGCCTGAGGCTTGCGCAACCTTGTAGGAGCGGGTTTACCC < 2:3710729/60‑1 TACGACGGCCTCGTATGCCTGAGGCTTGCGCAACCTTGTAGGAGCGGGTTTACCCGCGAATGGGCCGCAAAGCGGCCCCCAGCAATTCAGAAGTCCACGCTAACCCCC‑ACGCTAATACCCTGTTGCGTCAACTCATCACTCTTGCGCCAG > 1:1897396/1‑150 CTGAGGCTTGCGCAACCTTGTAGGAGCGGGTTCACCCGCGAATGGGCCGCAAAGCGGCCCCCAGCAATTCAGAAGTCCACGCTAACCCCC‑ACGCTAATACCCTGTTGCGTCAACTCATCACTCTTGCGCCAGTTGTAGTTCCCGCGCAAA > 2:3463589/1‑150 attcGCGGGTGAACCCGCGAATGGGCCGCAAAGCGGCCCCCAGCAATTCAGAAGTCCACGCTAACCCCC‑ACGCTAATACCCTGTTGCGTCAACTCATCACTCTTGCGCCAGTTGTAGTTCCCGCGCAAATGCACCCCTGCCACCAGTTCA > 1:3562930/5‑150 ttcGCGGGTGAACCCGCGAATGGGCCGCAAAGCGGCCCCCAGCAATTCAGAAGTCCACGCTAACCCCC‑ACGCTAATACCCTGTTGCGTCAACTCATCACTCTTGCGCCAGTTGTAGTTCCCGCGCAAATGCACCCCTGCCACCAGTTCAT > 1:3905606/4‑150 tcGCGGGTGAACCCGCGAATGGGCCGCAAAGCGGCCCCCAGCAATTCAGAAGTCCACGCTAACCCCC‑ACGCTAATACCCTGTCGCGTCAACTCATCACTCTTGCGCCAGTTGTAGTTCCCGCGCAAATGCACCCCTGCCACCAGTTCATG > 1:639673/3‑150 CCGCGAATGGGCCGCAAAGCGGCCCCCAGCAATTCAGAAGTCCACGCTAACCCCC‑CCGCTAATACCCTGTTGCGTCAACTCATCTCTCTTGCGCCAGTTGTAGTTCCCGCGCAAATGCACCCCTGCCACCAGTTCATGGCTCACACCCAG < 2:1980844/150‑1 CCGCGAATGGGCCGCAAAGCGGCCCCCAGCAATTCAGAAGTCCACGCTAACCCCC‑ACGCTAATACCCTGTTGCGTCAACTCATCACTCTTGCGCCAGTTGTAGTTCCCGCGCAAATGCACCCCTGCCACCAGTTCATGGCTCACACCCAG < 1:2132919/150‑1 CCGCGAATGGGCCGCAAAGCGGCCCCCAGCAATTCAGAAGTCCACGCTAACCCCC‑ACGCTAATACCCTGTTGCGTCAACTCATCACTCTTGCGCCAGTTGTAGTTCCCGCGCAAATGCACCCCTGCCACCAGTTCATGGCTCACACCCAG > 2:3867186/1‑150 CCGCGAATGGGCCGCAAAGCGGCCCCCAGCAAGTCAGAAGTCCACGCTAACCCCC‑ACGCTAATACCCTGTTGCGTCAACTCATCACTCTTGCGCCAGTGGTAGTTCCCGCGCACATGCACCCCTGCCACCAGTTCATGGCTCACACCCAG > 2:3693903/1‑150 CGCGAATGGGCCGCAAAGCGGCCCCCAGCAATTCAGAAGTCCACGCTAACCCCC‑ACGCTAATACCCTGTTGCGTCAACTCATCACTCTTGCGCCAGTTGTAGTTCCCGCGCAAATGCACCCCTGCCACCAGTTCATGGCTCACACCCAGG > 2:623148/1‑150 GCGAATGGGCCGCAAAGCGGCCCCCAGCAATTCAGAAGTCCACGCTAACCCCC‑ACGCTAATACCCTGTTGCGTCAACTCATCACTCTTGCGCCAGTTGTAGTTCCCGCGCAAATGCACCCCTGCCACCAGTTCATGGCTCACACCCAGGC < 1:4515644/150‑1 GCGAATGGGCCGCAAAGCGGCCCCCAGCAATTCAGAAGTCCACGCTAACCCCC‑ACGCTAATACCCTGTTGCGTCAACTCATCACTCTTGCGCCAGTTGTAGTTCCCGCGCAAATGCACCCCTGCCACCAGTTCATGGCTCACACCCAGGC < 1:4515426/150‑1 GCGAATGGGCCGCAAAGCGGCCCCCAGCAATTCAGAAGTCCACGCTAACCCCC‑ACGCTAATACCCTGTTGCGTCAACTCATCACTCTTGCGCCAGTTGTAGTTCCCGCGCAAATGCACCCCTGCCACCAGTTCATGGCTCACACCCAGGC < 2:1606357/150‑1 ctggGGGCCGCTTTGCGGCCCCCAGCAATTCAGAAGTCCACGCTAACCCCC‑ACGCTAATACCCTGTTGCGTCAACTCATCACTCTTGCGCCAGTTGTAGTTCCCGCGCAAATGCACCCCTGCCACCAGTTCATGGCTCACGCCCAGGCTC > 2:2669816/5‑150 GGGCCGCAAAGCGGCCCCCAGCAATTCAGAAGTCCACGCTAACCCCC‑ACGCTAATACCCTGTTGCGTCAACTCATCACTCTTGCGCCAGTTGTAGTTCCCGCGCAAATGCACCCCTGCCACCAGTTCATGGCTCCCACCCAGGCTCGCCC < 1:930069/150‑1 GGCCGCAAAGCGGCCCCCAGCAATTCAGAAGTCCACGCTAACCCCCAACGCTAATACCCTGTTGCGTCAACTCATCACTCTTGCGCCAGTTGTAGTTCCCGCGCAAATGCACCCCTGCCACCAGTTCATGGCTCACACCCAGGCTCGCCC < 2:1715699/150‑1 GGCCGCAAAGCGGCCCCCAGCAATTCAGAAGTCCACGCTAACCCCC‑ACGCTAATACCCTGTTGCGTCAACTCATCACTCTTGCGCCAGTTGTAGTTCCCGCGCAAATGCACCCCTGCCACCAGTTCATGGCTCACACCCAGGCTCGCCCG > 2:3588417/1‑150 GCCGCAAAGCGGCCCCCAGCATTTCAGAAGTCCACTCTAACCCCC‑ACGCTAAGACCCTGTTGCGTCAACTCATCACTCTTGCGCCAGTTTTAGTTCACGCGCAAATGCACCCCTGCCACCAGTTCATGGCTCACACCCAGGCTCGCCCGG < 2:3198801/150‑1 GCCGCAAAGCGGCCCCCAGCAATTCAGAAGTCCACGCTAACCCCC‑ACGCTAATACCCTGTTGCGTCAACTCATCACTCTTGCGCCAGTTGTAGTTCCCGCGCAAATGCACCCCTGCCACCAGTTCATGGCTCACACCCAGGCTCGCCCGG < 1:3664557/150‑1 GCCGCAAAGCGGCCCCCAGCAATTCAGAAGTCCACGCTAACCCCC‑ACGCTAATACCCTGTTGCGTCAACTCATCACTCTTGCGCCAGTTGTAGTTCCCGCGCAAATGCACCCCTGCCACCAGTTCATGGCTCACACCCAGGCTCGCCCGG > 1:1477757/1‑150 CCGCAAAGCGGCCCCCAGCAATTCAGAAGTCCACGCTAACCCCC‑ACGCTAATACCCTGTTGCGTCAACTCATCACTCTAGCGCCAGTTGTAGTTCCCGCGCAAATGCACCCCTGCCACCAGTTCATGGCTCACACCCAGGCTCGCCCGGG > 2:2563082/1‑150 GATGAGTTGACGCAACAGGGTATTAGCGTGGGGGTTAGCGTGGACTTCTGAATTGCTGGGGGCCGCTTTGCGGCCCATTCGCGGGTGAACCCGCTCCTACGACGGCCTCGTATGCCTGAGGCTTGCGCAACCTTGTAGGAGCGGGTTTACCCGCGAATGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/507174‑507013‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acccgcgaatgggcCGCAAAGCGGCCCCCAGCAATTCAGAAGTCCACGCTAACCCCC‑ACGCTAATACCCTGTTGCGTCAACTCATCACTCTTGCGCCAGTTGTAGTTCCCGCGCAAATGCACCCCTGCCACCAGTTCATGGCTCACACCCAGGCTCGCCCGGG > NC_002947/507103‑507251 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |