| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 796828 = | 85 (0.560) | 8 (0.060) | 6/244 | NT | 9.4% | intergenic (+27/‑163) | PP_0681/PP_0682 | hypothetical protein/inner membrane protein |
| ? | NC_002947 | 796898 = | 80 (0.590) | intergenic (+97/‑93) | PP_0681/PP_0682 | hypothetical protein/inner membrane protein | |||||
ATGAAGTTCAGGACTCATCAGGTGACTAAAAAAGCGACGGCGAGTATAGCCAGCCACCTGTTACAGCAAAAGCCCGGGGGCTGCTCCGCAGCCTGATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCGGCCTTGTGTCGCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/796992‑796828‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccttgtgtcgcgatCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCTGATGAGTCCTGAACTTCATGGAACGTATCCTCGAAAACGCGATGTATGCCTCGCGCTGGCTGCTCGCACCGAT > NC_002947/796898‑797046 ATGAAGTTCAGGACTCATCAGGTGACTAAAAAAGCGACGGCGAGTATAGCCAGCCACCTGTTACAGCAAAAGCCCGGGGGCTGCTCCGCAGCCTGATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCG > 1:1192596/1‑150ATGAAGTTCAGGACTCATCAGGTGACTAAAAAAGCGACGGCGAGTATAGCCAGCCACCTGTTACAGCAAAAGCCCGGGGGCTGCTCCGCAGCCTGATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCG > 1:2695782/1‑150ATGAAGTTCAGGACTCATCAGGTGACTAAAAAAGCGACGGCGAGTATAGCCAGCCACCTGTTACAGCAAAAGCCCGGGGGCTGCTCCGCAGCCTGATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCG > 1:2336049/1‑150 GAAGTTCAGGACCCATCAGGTGACTAAAAAAGCGACGGCGAGTATAGCCAGCCACCTGTTACAGCAAAAGCCCGGGGGCTGCTCCGCAGCCTGATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCGGC < 2:825274/150‑1 AGTTCAGGACTCATCAGGTGACTAAAAAAGCGACGGCGAGTATAGCCAGCCACCTGTTACAGCAAAAGCCCGGGGGCTGCTCCGCAGCCTGATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCGGCCT < 1:4886271/150‑1 AGTTCAGGACTCATCAGGTGACTAAAAAAGCGACGGCGAGTATAGCCAGCCACCTGTTACAGCAAAAGCCCGGGGGCTGCTCCGCAGCCTGATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCGGCCT < 1:234124/150‑1 AGTTCAGGACTCATCAGGTGACTAAAAAAGCGACGGCGAGTATAGCCAGCCACCTGTTACAGCAAAAGCCCGGGGGCTGCTCCGCAGCCTGATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCGGCCT < 2:3486687/150‑1 CAGGACTCATCAGGTGACTAAAAAAGCGACGGCGAGTATAGCCAGCCACCTGTTACAGCAAAAGCCCGGGGGCTGCTCCGCAGCCTGATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCGGCCTTGTG > 1:1376582/1‑150 AGGACTCATCAGGTGACTAAAAAAGCGACGGCGAGTATAGCCAGCCACCTGTTACAGCAAAAGCCCGGGGGCTGCTCCGCAGCCTGATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCGGCCTTGTGT > 1:3296543/1‑150 AGGACTCATCAGGTGACTAAAAAAGCGACGGCGAGTATAGCCAGCCACCTGTTACAGCAAAAGCCCGGGGGCTGCTCCGCAGCCTGATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCGGCCTTGTGT < 2:1988634/150‑1 GACGCATCAGGTGACTATAAAAGCGACGGCGAGTATAGCCAGCCACATGTTACAGCAAAAGCCCGGGGGCTGCTCCGCAGCCTGATCGCGGGACAAGGCCACACTCCCACAGCGTGCCGATGCTGTGCCTGGGGGAGCGGCCTTGTGTCG > 2:2938108/1‑150 TCATCAGGTGACTAAAAAAGCGACGGCGAGTATAGCCAGCCACCTGTTACAGCAAAAGCCCGGGGGCTGCTCCGCAGCCTGATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCGGCCTTGTGTCGCGA > 2:4222550/1‑150 GATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCGGCCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCTGAT > 1:2436847/1‑150 GATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCGGCCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCTGAT > 1:2436863/1‑150 AAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCGGCCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCGTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCTGATGAGTCCTGAAC > 2:1693331/1‑150 CCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCGGCCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCTGATGAGTCCTGAACTTCA > 2:3139882/1‑150 CCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCGGCCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCTGATGAGTCCTGAACTTCA > 1:3658476/1‑150 CTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCGGCCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCTGATGAGTCCTGAACTTCATGGAA < 1:3139882/150‑1 CCACAGCAAGCCGATGCTGTACCTGTGGGAGTGGCCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCT > 2:1263839/1‑73 CCACAGCAAGCCGATGCTGTACCTGTGGGAGTGGCCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCT < 1:1263839/73‑1 GGCCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTATTCACCTGATGAGTCCTGAACTTAATGGAACGTATCCTAGAAAACGCGATGTATGCCACGCGCTG > 1:2190214/1‑150 CTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCTGATGAGTCCTGAACTTCATGGAACGTATCCTCGAAAACGCGATGTATGCCTCGCGCTGGCT > 1:3857796/1‑150 TTGAGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCTGATGAGTCCTGAACTTCATGGAACGTATCCTCGAAAAAGCGATGTATGCCTCGCGCTGGCTG > 1:2191268/1‑150 TGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCTGATTAGTCCTGAACTTCATTGAACGTATCCTCGAAAACGCGATGTATGCCTCGCGCTGGCTGCTC > 1:2652855/1‑150 GTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCTGATGAGTCCTGAACTTCATGGAACGTATCCTCGAAAACGCGATGTATGCCTCGCGCTGGCTGCTCG > 2:3021073/1‑150 TCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCTGATGAGTCCTGAACTTCATGGAACGTATCCTCGAAAACGCGATGTATGCCTCGCGCTGGCTGCTCGC > 1:3593554/1‑150 TCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCTGATGAGTCCTGAACTTCATGGAACGTATCCTCGAAAACGCGATGTATGCCTCGCGCTGGCTGCTCGC > 1:3593480/1‑150 TCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCTGATGAGTCCTGAACTTCATGGAACGTATCCTCGAAAACGCGATGTATGCCTCGCGCTGGCTGCTCGC > 2:4835246/1‑150 TCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCTGATGAGTCCTGAACTTCATGGAACGTATCCTCGAAAACGCGATGTATGCCTCGCGCTGGCTGCTCGC < 2:769411/150‑1 TCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCTGATGAGTCCTGAACTTCATGGAACGTATCCTCGAAAACGCGATGTATGCCTCGCGCTGGCTGCTCGCACCGAT < 2:5084188/150‑1 ATGAAGTTCAGGACTCATCAGGTGACTAAAAAAGCGACGGCGAGTATAGCCAGCCACCTGTTACAGCAAAAGCCCGGGGGCTGCTCCGCAGCCTGATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCGGCCTTGTGTCGCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/796992‑796828‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccttgtgtcgcgatCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCTGATGAGTCCTGAACTTCATGGAACGTATCCTCGAAAACGCGATGTATGCCTCGCGCTGGCTGCTCGCACCGAT > NC_002947/796898‑797046 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |