New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1838113 =	146 (0.960)	12 (0.080)	8/256	NT	8.5%	intergenic (+18/+86)	PP_1642/PP_1643	hypothetical protein/membrane protein
	?	NC_002947	1838195 =	123 (0.870)					intergenic (+100/+4)	PP_1642/PP_1643	hypothetical protein/membrane protein

GTTCATTGCCGGGCTACTGTACGTGCGCTGGAAGTTCCAGCATGAGCGGCGCATGGCGGGCGAAGGCAGTTAGATTTTTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1838271‑1838113 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccgcgaaAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCC  >  NC_002947/1838195‑1838342                                                                                                                                                                                                                                                                                                                     GTTCATTGCCGGGCTACTGTACGTGCGCTGGAAGTTCCAGCATGAGCGGCGCATGGCGGGCGAAGGCAGTTAGATTTTTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCAT                                                                                                                                                               <  1:2821963/150‑1  TTCATTGCCGGGCTACTGTACGTGCGCTGGAAGTTCCAGCATGAGCGGCGCATGGCGGGCGAAGGCAGTTAGATTTTTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATG                                                                                                                                                              >  1:3074027/1‑150  TTCATTGCCGGGCTACTGTACGTGCGCTGGAAGTTCCAGCATGAGCGGCGCATGGCGGGCGAAGGCAGTTAGATTTTTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATG                                                                                                                                                              >  1:4525349/1‑150     ATTGCCGGGCTACTGTACGTGCGCTGGAAGTTCCAGCATGAGCGGCGCATGGCGGGCGAAGGCAGTTAGATTTTTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATGCCC                                                                                                                                                           >  2:1133990/1‑150     ATTGCCGGGCTACTGTACGTGCGCTGGAAGTTCCAGCATGAGCGGCGCATGGCGGGCGAAGGCAGTTAGATTTTTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATGCCC                                                                                                                                                           >  2:232590/1‑150       TGCCGGGCTACTGTACGTGCGCTGGAAGTTCCAGCATGAGCGGCGCATGGCGGGCGAAGGCAGTTAGATTTTTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATGCCCGC                                                                                                                                                         <  2:4055122/150‑1         CCGGGCTACTGTACGTGCGCTGGAAGTTCCAGCATGAGCGGCGCATGGCGGGCGAAGGCAGTTAGATTTTTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATGCCCGCGA                                                                                                                                                       >  2:802350/1‑150          CGGGCTACTGTACGTGCGCTGGAAGTTCCAGCATGAGCGGCGCATGGCGGGCGAAGGCAGTTAGATTTTTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGGGCGGGCCTGCCCGCGAA                                                                                                                                                      >  1:678803/1‑150          CGGGCTACTGTACGTGCGCTGGAAGTTCCAGCATGAGCGGCGCATGGCGGGCGAAGGCAGTTAGATTTTTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATGCCCGCGAA                                                                                                                                                      <  1:2596062/150‑1          CGGGCTACTGTACGTGCGCTGGAAGTTCCAGCATGAGCGGCGCATGGCGGGCGAAGGCAGTTAGATTTTTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATGCCCGCGAA                                                                                                                                                      <  1:2596068/150‑1          CGGGCTACTGTACGTGCGCTGGAAGTTCCAGCATGAGCGGCGCATGGCGGGCGAAGGCAGTTAGATTTTTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATGCCCGCGAA                                                                                                                                                      <  1:3367418/150‑1                                                              GAAGGCAGTTAGATTTTTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATGCCCGCGAATAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCG                                                                                                  >  2:5040275/1‑150                                                                                          CCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGC                                                                      >  2:1274686/1‑150                                                                                           CCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCC                                                                     >  2:2071611/1‑150                                                                                           CCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCC                                                                     >  2:1864261/1‑150                                                                                                 CCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGC                                                               >  2:2249340/1‑150                                                                                                  CACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCT                                                              >  2:4806669/1‑150                                                                                                  CACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCT                                                                                                               >  2:1788760/1‑101                                                                                                  CACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCT                                                                                                               <  1:1788760/101‑1                                                                                                   ACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTC                                                             >  1:909823/1‑150                                                                                                   ACAGGTACTGCACAGGCCTTAAGTGCGGTGC‑‑‑‑‑CTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAG                                                        >  2:3511247/1‑150                                                                                                                              GTGCGATTACTGTGGGAGCGGGCATGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACC                                  >  2:1761542/1‑150                                                                                                                                            ttcGCGGGCACGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTC                    >  1:4706005/4‑150                                                                                                                                                       GCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCA         <  2:955879/150‑1                                                                                                                                                       GCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCA         <  1:3632790/150‑1                                                                                                                                                       GCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCA         <  1:3632842/150‑1                                                                                                                                                        CCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAG        >  2:3556061/1‑150                                                                                                                                                         CCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGC       >  1:4404958/1‑150                                                                                                                                                         CCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGC       >  1:4154112/1‑150                                                                                                                                                          CGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCA      >  1:828548/1‑150                                                                                                                                                          CGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCA      <  1:4807745/150‑1                                                                                                                                                          CGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCA      >  2:2272474/1‑150                                                                                                                                                           GCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCTCCCGCGCCGGGTCGAACGCCGCCAGCAC     <  1:1925241/150‑1                                                                                                                                                           GCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCAC     >  2:2200580/1‑150                                                                                                                                                           GCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCAC     <  1:1925352/150‑1                                                                                                                                                           GCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCAC     >  2:161403/1‑150                                                                                                                                                           GCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGA                                                                           <  2:2177462/80‑1                                                                                                                                                           GCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGA                                                                           >  1:2177462/1‑80                                                                                                                                                              AAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCC  >  1:3862471/1‑150                                                                                                                                                              AAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCC  >  2:1137002/1‑150                                                                                                                                                              AAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCC  <  1:2645625/150‑1                                                                                                                                                                                                                                                                                                                     GTTCATTGCCGGGCTACTGTACGTGCGCTGGAAGTTCCAGCATGAGCGGCGCATGGCGGGCGAAGGCAGTTAGATTTTTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1838271‑1838113 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccgcgaaAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCC  >  NC_002947/1838195‑1838342

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.