New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4161047	93 (0.610)	13 (0.090)	5/250	NT	14.4%	intergenic (+29/‑180)	PP_3661/PP_3662	membrane protein/hypothetical protein
	?	NC_002947	= 4161109	71 (0.510)					intergenic (+91/‑118)	PP_3661/PP_3662	membrane protein/hypothetical protein

ATGGAGACCCGCTTCAGCCAGATTCGCCAGGCTGGGCCACGGGCGCTGGCCACCGGTGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4160890‑4161047 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcttcgcgggtGAACCCGCTCCTAC‑‑‑AGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTTACCCGCGAAGCAGCCGACTCGGTCTCCAGTCAGCCCAACAGCTTCTGCACCCCCAGGGTAATCGCCAGCCCCCCGCCAACCAGC  <  NC_002947/4161109‑4160964                                                                                                                                                                                                                                                                                                                     ATGGAGACCCGCTTCAGCCAGATTCGCCAGGCTGGGCCACGGGCGCTGACCACCGGTGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCT                                                                                                                                                               <  2:2740451/150‑1  TGGAGACCCGCTTCAGCCAGATTCGCCAGGCTGGGCCACGGGCGCTGGCCACCGGTGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCat                                                                                                                                                              >  2:2663631/1‑148   GGAGACCCGCTTCAGCCAGATTCGCCAGGCTGGGCCACGGGCGCTGGCCACCGGTGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCGGCgtg                                                                                                                                                             >  2:587765/1‑147     AGACCCGCTTCAGCCAGATTCGCCAGGCTGGGCCACGGGCGCTGGCCACCGGTGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGC                                                                                                                                                           <  1:852329/150‑1     AGACCCGCTTCAGCCAGATTCGCCAGGCTGGGCCACGGGCGCTGGCCACCGGTGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGC                                                                                                                                                           <  2:235187/150‑1       ACCCGCTTCAGCCAGATTCGCCAGGCTGGGCCACGGGCGCTGGCCACCGGTGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGG                                                                                                                                                         <  1:4339399/150‑1       ACCCGCTTCAGCCAGATTCGCCAGGCTGGGCCACGGGCGCTGGCCACCGGTGCGATCCTCAACCTGTGGCTGGTGGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGG                                                                                                                                                         <  1:4036917/150‑1        CCCGCTTCAGCCAGATTCGCCAGGCTGGGCCACGGGCGCTGGCCACCGGTGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGG                                                                                                                                                        <  1:4712537/150‑1         CCGCTTCAGCCAGATTCGCCAGGCTGGGCCACGGGCGCTGGCCACCGGTGCGATCCTCCCCCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGTTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGT                                                                                                                                                       <  2:3446748/150‑1                                                    ACCGGTGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACCGGTGGGGCCTTGCCGTCTTCAGGGCAGC                                                                                                            <  2:4232453/150‑1                                                        GTGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGCCTGCTTCGCGGGTGAACCCGCACCTAC‑‑‑AGGGGCCTTGCCGTCTTCAGGGCAGCACCCACC                                                                                                     >  2:2647147/1‑150                                                         TGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTGAACCCGCTCCTAC‑‑‑AGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCT                                                                                                    <  2:2059141/150‑1                                                         TGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTAC‑‑‑AGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCT                                                                                                    <  1:3623316/150‑1                                                           CGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTGAACCCGCTCCTAC‑‑‑AGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGT                                                                                                  <  2:3637428/150‑1                                                           CGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTGAACCCGCTCCTAC‑‑‑AGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGT                                                                                                  <  2:1640475/150‑1                                                            GATCCTCAACCTGTTGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGTCTGGAGACCGAGTCGGCTGCTTCGCGGGTGAACCCGCTCCTAC‑‑‑AGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTA                                                                                                 <  2:872159/150‑1                                                            GATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTGAACCCGCTCCTAC‑‑‑AGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTA                                                                                                 <  2:3510142/150‑1                                                            GATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTGAACCCGCTCCTAC‑‑‑AGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTA                                                                                                 <  1:1529548/150‑1                                                            GATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTAC‑‑‑AGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTA                                                                                                 <  1:811488/150‑1                                                            GATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGCTGCCTGCTTCGCGGGTGAACCCGCTCCTAC‑‑‑AGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTA                                                                                                 <  1:140716/150‑1                                                                 TCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTGAACCCGCTCCTAC‑‑‑AGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGC                                                                                            <  2:928518/150‑1                                                                   AACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTAC‑‑‑AGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGG                                                                                          <  1:2629367/150‑1                                                                                                                                                   TGCTTCGCGGGTGAACCCGCTCCTAC‑‑‑AGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTTACCCGCGAAGCAGGCGACTCGGTCTCCAGTCAGCCCAACAGTTTCTGCACCCCCAGGGTAATCGCCAGCCCCCCGC          >  1:842673/1‑150                                                                                                                                                      ggcggGGGTGAACCCGCACCTCC‑‑‑GGGGGCCTTGCCTTCTTCTGGGCAGCACCCACCTGTTGGAGCGGGTTTACCCGCGATGCCGCCGACTCGGTCTCCAGTCAGCCCAACAGCTTCTGCACCCCCAGGGTAATCGCCAGCCCCCCGCCAA       <  2:4613425/145‑1                                                                                                                                                      TTCGCGGGTGAACCCGCTCCTAC‑‑‑AGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTTACCCGCGAAGCAGCCGACTCGGTCTCCAGTCAGCCCAACAGCTTCTGCACCCCCAGGGTAATCGCCAGCCCCCCGCCAA       >  2:3269525/1‑150                                                                                                                                                       TCGCGGGTGAACCCGCTCCTAC‑‑‑AGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTTACCCGCGAAGCAGCCGACTCGGTCTCCAGTCAGCCCAACAGCTTCTGCACCCCCAGGGTAATCGCCAGCCCCCCGCCAAC      >  1:4152962/1‑150                                                                                                                                                           GGGTGAACCCGCACCTCC‑‑‑GGGGGCCTTGCGGTCTTCCGGGCACCACCCACGTGTAGGCGGGGGTTTACCCGCGAAGCACCCGACTCGGTCTCCAGTCAGCCCAACAGCTTCTGCACCCCCAGGGTAATCGCCAGCCCCCCGCCAACCAGC  <  2:4514081/150‑1                                                                                                                                                                                                                                                                                                                     ATGGAGACCCGCTTCAGCCAGATTCGCCAGGCTGGGCCACGGGCGCTGGCCACCGGTGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4160890‑4161047 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcttcgcgggtGAACCCGCTCCTAC‑‑‑AGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTTACCCGCGAAGCAGCCGACTCGGTCTCCAGTCAGCCCAACAGCTTCTGCACCCCCAGGGTAATCGCCAGCCCCCCGCCAACCAGC  <  NC_002947/4161109‑4160964

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.