| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5562719 | 106 (0.700) | 14 (0.100) | 6/250 | NT | 12.2% | intergenic (‑250/+52) | hisZ/hflC | ATP phosphoribosyltransferase regulatory subunit/integral membrane ATP‑dependent zinc metallopeptidase |
| ? | NC_002947 | = 5562730 | 106 (0.770) | intergenic (‑261/+41) | hisZ/hflC | ATP phosphoribosyltransferase regulatory subunit/integral membrane ATP‑dependent zinc metallopeptidase | |||||
TCCCAGCGCAGCCACCGTACCCGACACCCTCAAATTGCCTTGCGAGCTGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCACCCCGCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5562558‑5562719‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaccccgcctggCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCAATTTGAGGGTG < NC_002947/5562730‑5562582 TCCCAGCGCAGCCACCGTACCCGACACCCTCAAATTGCCTTGCGAGCTGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATG > 2:3189936/1‑150TCCCAGCGCAGCCACCGTACCCGACACCCTCAAATTGCCTTGCGAGCTGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATG > 2:2593156/1‑150 CCCAGCGCAGCCACCGTACCCGACACCCTCAAATTGCCTTGCGAGCTGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGC > 1:168258/1‑150 CCCAGCGCAGCCACCGTACCCGACACCCTCAAATTGCCTTGCGAGCTGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGC < 1:5117802/150‑1 CCCAGCGCAGCCACCGTACCCGACACCCTCAAATTGCCTTGCGAGCTAACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCACATCATACACCCCTTTTCATTCAGGATGC > 1:1584687/1‑150 CCCAGCGCAGCCACCGTACCCGACACCCTCAAATTGCCGTGCGAGCTAACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGC > 1:1584690/1‑150 CCAGCGCAGCCACCGTACCCGACACCCTCAAATTGCCTTGCGAGCTGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCA > 2:4065109/1‑150 CAGCGCAGCCACCGTACCCGACACCCTCAAATTGCCTTGCGAGCTGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCAC > 2:2794349/1‑150 CGCAGCCACCGTACCCGACACCCTCAAATTGCCTTGCGAGCTGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGAAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCACCCC < 1:3282244/150‑1 AGCCACCGTACCCGACACCCTCAAATTGCCTTGCGAGCTGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCACCCCGCC > 2:4613160/1‑150 CAAATTGCCTTGCGAGCCGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATGCA‑GCGGCACCCCGCCTGGCAGCTAATGCACCAGGCGG < 1:3512115/150‑1 aactgGCCGTGCGAGCTGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCACCCCGCCTGGCAGCTAATGCACCAGGCGG < 1:4538595/145‑1 acTTGCCTTGCGAGCTGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCACCCCGCCTGGCAGCTAATGCACCAGGCGGG < 1:1323095/148‑1 AATTGCCTTGCGAGCTGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCACCCCGCCTGGCAGCTAATGCACCAGGCGGG < 2:1348225/150‑1 ATTGCCTTGCGAGCTGACCAACCCGACACCCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGG < 1:3216470/150‑1 AGCTGACCAAACCGTCAACCGGCGCTGAGCAAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAA < 1:4956966/150‑1 AGCTGACAAAACCGTCAACCGGCGCTGAGCCAATAAACCTTGAACACGCAAAAAACCCGGTAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAA < 1:4956994/150‑1 AAACCGTCAACCGGCGCTGAGCAAAACAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATGCA‑GCGGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGG < 1:494185/150‑1 CCGACAACCGGCGCTCACCCAATCAACCTACCACACCAAAAAAAGCCGCTAAATTTCCCGCCTGCCTCATCATACACCCCTTTTCATTCAGGATGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGT < 1:3760821/150‑1 CCCTTTTCATTCAGGATGCACCCCGCCTGGTGCATTAGCTGCCAGGCGGGGTGC‑CGCTGCATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCGAGGTTGATTGGCTCAGCGCCGGTTGACGGTTT > 2:532852/1‑150 CCCTTTTCATTCAGGATGCACCCCGCCTGGTGCATTAGCTGCCAGGCGGGGTGC‑CGCTGCATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTT > 2:3297181/1‑150 TTTTCATTCAGGATGCACCCCGCCTGGTGCATTAGCTGCCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGAGGGTTTGG > 1:4476751/1‑150 TTTTCATTCAGGATGCACCCCGCCTGGTGCATTAGCTGCCAGGCGGGGTGC‑CGCTGCATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGT > 1:1224009/1‑150 TTTCATTCAGGATGCACCCCGCCTGGTGCATTAGCTGCCAGGCGGGGTGC‑CGCTGCATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTC > 1:4959027/1‑150 CACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAGGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCA > 2:4330007/1‑150 ACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGACTGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCACGGTTGATTGGCTCCGCGCCGGTTGTCGGTTTGGTCAGCTCGCAAGGCAc > 1:3690284/1‑149 CCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCAAT < 1:3125742/150‑1 CCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCAAT > 2:4120553/1‑150 CCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCAAT < 1:3125411/150‑1 CCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCAATT > 2:3827143/1‑150 CCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTAACGGCTTTTTTGAGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCAATT > 1:2729751/1‑150 CCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCAATTT < 1:1564946/150‑1 CCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCAATTT > 2:3193126/1‑150 CGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCAATTTG > 1:2992361/1‑150 GCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCAATTTGA < 1:1478629/150‑1 CCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCAATTTGAG < 1:1331950/150‑1 CCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCAATTTGAG < 1:4975175/150‑1 CCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCAATTTGAG < 1:403066/150‑1 CTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCAATTTGAGG < 1:2524363/150‑1 GCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCAATTTGAGGGTG > 2:2973368/1‑150 GCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCAATTTGAGGGTG > 1:2740477/1‑150 GCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAAATTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCACTTTGAGGGTG > 1:4294891/1‑150 TCCCAGCGCAGCCACCGTACCCGACACCCTCAAATTGCCTTGCGAGCTGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCACCCCGCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5562558‑5562719‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaccccgcctggCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCAATTTGAGGGTG < NC_002947/5562730‑5562582 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |