| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5829793 = | 172 (1.130) | 11 (0.080) | 7/254 | NT | 6.4% | intergenic (+17/+182) | mtgA/rpoH | monofunctional biosynthetic peptidoglycan transglycosylase/RNA polymerase factor sigma‑32 |
| ? | NC_002947 | 5829901 = | 166 (1.180) | intergenic (+125/+74) | mtgA/rpoH | monofunctional biosynthetic peptidoglycan transglycosylase/RNA polymerase factor sigma‑32 | |||||
GCCGCTGGCCCTATGGGGTGAGCGGCTTTTTTGTTTGGCTTTGCCGGCCTCTTCGCGGGTAAGCCCGCTCCTACAGGGGATGCGGTTGCCTGTAGGCGCGGGTTTGCCCGCGAGGAGGCCGGGGATGCGGTTGCCCGTAGGAGCGGGTTTACCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5829951‑5829793‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttacccgcgaaGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCT > NC_002947/5829901‑5830049 GCCGCTGGCCCTATGGGGTGAGCGGCTTTTTTGTTTGGCTTTGCCGGCCTCTTCGCGGGTAAGCCCGCTCCTACAGGGGATGCGGTTGCCTGTAGGCGCGGGTTTGCCCGCGAGGAGGCCGGGGATGCGGTTGCCCGTAGGAGCGGGTTT > 1:1488900/1‑150GCCGCTGGCCCTATGGGGTGAGCGGCTTTTTTGTTTGGCTTTGCCGGCCTCTTCGCGGGTAAGCCCGCTCCTACAGGGGATGCGGTTGCCTGTAGGCGCGGGTTTGCCCGCGAGGAGGCCGGGGATGCGGTTGCCCGTAGGAGCGGGTTT > 1:3433596/1‑150 CCGCTGGCCCTATGGGGTGAGCGGCTTTTTTGTTTGGCTTTGCCGGCCTCTTCGCGGGTAAGCCCGCTCCTACAGGGGATGCGGTTGCCTGTAGGCGCGGGTTTGCCCGCGAGGAGGCCGGGGATGCGGTTGCCCGTAGGAGCGGGTTTA < 2:3953999/150‑1 CCGCGGGCCCTATGGGGTGAGCGGCTTATTTGTTTGGCTTTGCCGGCCTCTTCGCGGGTAAGCCCGCTCCTACAGGGGATGCGGTTGCCTGTAGGCGCGGGTTTGCCCGCGAGGAGGCCGGGGATGCGGTTGCCCGTAGGAGCGGGTTTA < 2:3953950/150‑1 GCTGGCCCTATGGGGTGAGCGGCTTTTTTGTTTGGCTTTGCCGGCCTCTTCGCGGGTAAGCCCGCTCCTACAGGGGATGCGGTTGCCTGTAGGCGCGGGTTTGCCCGCGAGGAGGCCGGGGATGCGGTTGCCCGTAGGAGCGGGTTTACC > 1:2934882/1‑150 GCTGGCCCTATGGGGTGAGCGGCTTTTTTGTTTGGCTTTGCCGGCCTCTTCGCGGGTAAGCCCGCTCCTACAGGGGATGCGGTTGCCTGTAGGCGCGGGTTTGCCCGCGAGGAGGCCGGGGATGCGGTTGCCCGTAGGAGCGGGTTTACC > 1:322422/1‑150 CCCTATGGGGTGAGCGGCTTTTTTGTTTGGCTTTGCCGGCCTCTTCGCTGGTAAGCCCGCTCCTACAGGGGATGCGGTTGCCTGTAGGCGCGGGTTTGCCCGCGAGGAGGCCGGGGATGCGGTTGCCCGTAGGAGCGGGTTTACCCGCGA < 2:1836691/150‑1 CCTATGGGGTGAGCGGCTTTTTTGTGAGGCTTTGCCGGCCACTTCGCGGGTAAGCCCGCTCCTACAGGGGATGCGGTTGCCTGTAGGCGCGGGTTTGCCCGCGAGGAGGCCGGGGATGCGGTAGCCCGTAGGAGCGGGTTTACCCGCGAA > 2:790359/1‑150 TTTGGCTTTGCCGGCCTCTTCGCGGGTAAGCCCGCTCCTACAGGGGATGCGGTTGCCTGTAGGCGCGGGTTTGCCCGCGAGGAGGCCGGGGCTGCGGTTGCCCGTAGGAGCGGGTTTACCCGCCAAAGGGCCGGCCAAGCCAAACAAAAA > 2:3940108/1‑150 TTCGCGGGTAAGCCCGCTCCTACAGGGGATGCGGTTGCCTGTAGGCGCGGGTTTGCCCGCGAGGAGGCCGGGGATGCGGTTGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGG > 2:3927313/1‑150 GGTAAGCCCGCTCCTACAGGGGATGCGGTTGCCTGTAGGCGCGGGTTTGCCCGCGAGGAGGCCGGGGATGCGGTTGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGC > 1:4174467/1‑150 CCCGCTCCTACAGGGGATGCGGTTGCCTGTAGGCGCGGGTTTGCCCGCGAGGAGGCCGGGGATGCGGTTGCCCGTAGGAGCGGGTTTACCCGCGACGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTT > 2:791970/1‑150 CCCGCTCCTACAGGGGATGCGGTTGCCTGTAGGCGCGGGTTTGCCCGCGAGGAGGCCGGGGATGCGGTTGCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTT > 1:4576621/1‑150 CTACAGGGGATGCGGTTGCCTGTAGGCGCGGGTTTGCCCGCGAGGAGGCCGGGGATGCGGTTGCCCGTAGGAGCGGGCTTATCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTAC > 2:621361/1‑150 CTACAGGGGATGCGGTTGCCTGTAGGCGCGGGTTTGCCCGCGAGGAGGCCGGGGATGCGGTTGCCCGTAGGAGCGGGCTTATCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTAC > 2:621353/1‑150 GCGGGTTTGCCCGCGAGGAGGCCGGGGATGCGGTTGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCA > 1:1984544/1‑150 acaGGGGATGCGGTTGCCTGTAGGCGCGGGTTTGCCCGCGAGGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATC > 2:2192895/4‑150 acaGGGGATGCGGTTGCCTGTAGGCGCGGGTTTGCCCGCGAGGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATC > 2:3139645/4‑150 CGTAGGCGGGGGTTTACCCGCTAACGGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGG < 1:3940108/150‑1 TACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGC < 2:4817975/150‑1 CCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGA > 1:2471763/1‑150 CCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGA > 1:4172185/1‑150 CGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACACCCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGAT < 2:1900153/150‑1 CGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGAT < 1:3055805/150‑1 CGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGAT < 2:5069477/150‑1 CGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGAT < 1:3055850/150‑1 GCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATA < 1:2546490/150‑1 CGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATAC < 1:575891/150‑1 AAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGC < 2:4533719/150‑1 AGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCT < 2:1107378/150‑1 GCCGCTGGCCCTATGGGGTGAGCGGCTTTTTTGTTTGGCTTTGCCGGCCTCTTCGCGGGTAAGCCCGCTCCTACAGGGGATGCGGTTGCCTGTAGGCGCGGGTTTGCCCGCGAGGAGGCCGGGGATGCGGTTGCCCGTAGGAGCGGGTTTACCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5829951‑5829793‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttacccgcgaaGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTCAATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCT > NC_002947/5829901‑5830049 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |