| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 181533 | 0 (0.000) | 21 (0.140) | 9/268 | NT | 100% | noncoding (2901/2902 nt) | PP_23SB | 23S ribosomal RNA |
| ? | NC_002947 | = 529693 | NA (NA) | intergenic (+26/‑94) | PP_23SC/PP_5SC | 23S ribosomal RNA/5S ribosomal RNA | |||||
GAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACA‑CCCAAGCAATTTGCTGACGCAGATTGCGGTGGTGAAGACGAAAGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTGGCAACAGAATTTCTTGACGACCATAG > NC_002947/181384‑181682 | gAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACA‑CC < 2:524036‑M1/150‑1 (MQ=255)gAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACA‑CC > 2:4921727‑M1/1‑150 (MQ=255)gAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACA‑CC > 1:1605081‑M1/1‑150 (MQ=255)gAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACA‑CC > 2:484908‑M1/1‑150 (MQ=255)gAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACA‑CC > 1:1815949‑M1/1‑150 (MQ=255)gAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACA‑CC > 2:3040321‑M1/1‑150 (MQ=255)gAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACA‑CC > 2:3040103‑M1/1‑150 (MQ=255)gAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACA‑CC > 2:1893556‑M1/1‑150 (MQ=255)gAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACA‑CC > 1:787972‑M1/1‑150 (MQ=255)gAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACA‑CC > 1:5106479‑M1/1‑150 (MQ=255) cTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACA‑CCcaaacaatctgcgtagcagattgctt < 2:3422088‑M1/150‑27 (MQ=255) cTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACA‑CCcaaacaatctgcgtagcagattgctt < 1:241349‑M1/150‑27 (MQ=255) tGGGATCTTGAATCCCCTACAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACA‑CCcaaacaatctgcgtagcagattgcttg < 1:1225282‑M1/150‑28 (MQ=255) tGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATCCTAATTGCCCGTGAGGCTTGACCATATAACA‑CCcaaacaatctgcgtagcagattgcttg < 2:3531827‑M1/150‑28 (MQ=255) gggATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACA‑CCcaagcaatctgcgtagcagattgcttgg < 1:1701276‑M1/150‑29 (MQ=255) gggATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACA‑CCcaagcaatctgcgtagcagattgcttgg < 1:1701416‑M1/150‑29 (MQ=255) gggATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACA‑CCcaagcaatctgcgtagcagattgcttgg < 2:2922873‑M1/150‑29 (MQ=255) gggATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACA‑CCcaaacaatctgcgtagcagattgcttgg < 1:1196505‑M1/150‑29 (MQ=255) gggATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACA‑CCcaaacaatctgcgtagcagattgcttgg < 1:3367795‑M1/150‑29 (MQ=255) ggATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACA‑CCaccgcaatctgcgtcagcaaattgcttgg < 1:3530242‑M1/150‑30 (MQ=255) gATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACA‑CCcaagcaatctgcgtagcagattgcttgggt < 2:4448118‑M1/150‑31 (MQ=255) gATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACA‑CCaccacaatctgcgtagcagattgcttgggt < 1:3853132‑M1/150‑31 (MQ=255) aTCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCaccacaatctgcgtagcagattgcttgggt < 1:4035082‑M1/150‑31 (MQ=255) gAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACA‑CCaccgcaatctgcgtagcagattgcttgggtgttata < 2:1903130‑M1/150‑37 (MQ=255) aTCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACA‑CCaccacaatctgcgtagcagattgcttgggtgttatatg < 1:3028033‑M1/150‑39 (MQ=255) aTCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACA‑CCaccacaatctgcgtagcagattgcttgggtgttatatg < 1:54932‑M1/150‑39 (MQ=255) tCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACA‑CCcaagcaatctgcgtcagcaaattgcttgggtgttatatg < 1:2669346‑M1/150‑40 (MQ=255) ccccTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACA‑CCaccacaatctgcgtagcagattgcttgggtgttatatggt < 2:1345108‑M1/150‑41 (MQ=255) gCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACA‑CCaccacaatctgcgtagcagattgcttgggtgttat > 1:405655‑M1/1‑51 (MQ=255) gCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACA‑CCaccacaatctgcgtagcagattgcttgggtgttat < 2:405655‑M1/86‑36 (MQ=255) gTGAGGCTTGACCATATAACA‑CCcaaacaatctgcgtagcagattgcttgggtgttatatggtcaagcctcacgggcaattagtatttgttagctcaacgcctcacagcgcttacacacccaacctatcaacgtcgtagtcttcgacggc > 2:413669‑M1/1‑23 (MQ=255) ca‑ccaccacaatctgcgtagcagattgcttgggtgttatatggtcaagcctcacgggcaattagtattggttagctcaacgcctcacagcgcttacacacccaacctatcaacgtcgtagtcttcgacggccctttaggggattcaagat < 2:1881141‑M1/150‑147 (MQ=255) ca‑ccaccacaatctgcgtagcagattgcttgggtgttatatggtcaagcctcacgggcaattagtattggttagctcaacgcctcacagcgcttacacacccaacctatcaacgtcgtagtcttcgacggccctttaggggattcaagat < 1:2720623‑M1/150‑147 (MQ=255) ca‑ccaccacaatctgcgtagcagattgcttgggtgttatatggtcaagcctcacgggcaattagtattggttagctcaacgcctcacagcgcttacacacccaacctatcaacgtcgtagtcttcgacggccctttaggggattcaagat > 2:3974641‑M1/1‑4 (MQ=255) ca‑ccaccacaatctgcgtagcagattgcttgggtgttatatggtcaagcctcacgggcaattagtattggttagctcaacgcctcacagcgcttacacacccaacctatcaacgtcgtagtcttcgacggccctttaggggattcaagat < 1:2720421‑M1/150‑147 (MQ=255) ca‑ccaccacaatctgcgtagcagattgcttgggtgttatatggtcaagcctcacgggcaattagtattggttagctcaacgcctcacagcgcttacacacccaacctatcaacgtcgtagtcttcgacggccctttaggggattcaagat > 2:4438444‑M1/1‑4 (MQ=255) a‑ccaccacaatctgcgtagcagattgcttgggtgttatatggtcaagcctcacgggcaattagtattggttagctcaacgcctcacagcgcttacacacccaacctatcaacgtcgtagtcttcgacggccctttaggggattcaagatc > 2:5034642‑M1/1‑3 (MQ=255) a‑ccaccacaatctgcgtagcagattgcttgggtgttatatggtcaagcctcacgggcaattagtattggttagctcaacgcctcacagcgcttacacacccaacctatcaacgtcgtagtcttcgacggccctttaggggattcaagatc > 1:1347228‑M1/1‑3 (MQ=255) a‑ccaccacaatctgcgtagcagattgcttgggtgttatatggtcaagcctcacgggcaattagtattggttagctcaacgcctcacagcgcttacacacccaacctatcaacgtcgtagtcttcgacggccctttaggggattcaagatc > 1:4796584‑M1/1‑3 (MQ=255) a‑ccaccacaatctgcgtagcagattgcttgggtgttatatggtcaagcctcacgggcaattagtattggttagctcaacgcctcacagcgcttacacacccaacctatcaacgtcgtagtcttcgacggccctttaggggattcaagatc > 1:3636265‑M1/1‑3 (MQ=255) a‑ccaccacaatctgcgtagcagattgcttgggtgttatatggtcaagcctcacgggcaattagtattggttagctcaacgcctcacagcgcttacacacccaacctatcaacgtcgtagtcttcgacggccctttaggggattcaagatc > 2:4494302‑M1/1‑3 (MQ=255) ccaccacaatctgcgtagcagattgcttgggtgttatatggtcaagcctcacgggcaattagtattggttagctcaacgcctcacagcgcttacacacccaacctatcaacgtcgtagtcttcgacggccctttaggggattcaagatcc > 1:2858047‑M1/1‑2 (MQ=255) ccaccacaatctgcgtagcagattgcttgggtgttatatggtcaagcctcacgggcaattagtattggttagctcaacgcctcacagcgcttacacacccaacctatcaacgtcgtagtcttcgacggccctttaggggattcaagatcc > 1:2857720‑M1/1‑2 (MQ=255) ccaccacaatctgcgtagcagattgcttgggtgttatatggtcaagcctcacgggcaattagtattggttagctcaacgcctcacagcgcttacacacccaacctatcaacgtcgtagtcttcgacggccctttaggggattcaagatcc > 1:3545051‑M1/1‑2 (MQ=255) ccaccacaatctgcgtagcagattgcttgggtgttatatggtcaagcctcacgggcaattagtattggttagctcaacgcctcacagcgcttacacacccaacctatcaacgtcgtagtcttcgacggccctgtaggggattcaagatcc > 2:4916520‑M1/1‑2 (MQ=255) ccaccacaatctgcgtagcagattgcttgggtgttatatggacaagcctcacgggcaattagtattggttagctcaacgcctcacagcgcttacacacccaacctatcaacgtcgtagtcttcgacggccctttaggggattcaagatcc < 2:1759230‑M1/150‑149 (MQ=255) caccacaatctgcgtagcagattgcttgggtgttatatggtcaagcctcacgggcaattagtattggttagctcaacgcctcacagcgcttacacacccaacctatcaacgtcgtagtcttcgacggccctttaggggattcaagatccc > 1:231993‑M1/1‑1 (MQ=255) caccacaatctgcgtagcagattgcttgggtgttatatggtcaagcctcacgggcaattagtattggttagctcaacgcctcacagcgcttacacacccaacctatcaacgtcgtagtcttcgacggccctttaggggattcaagatccc > 2:279882‑M1/1‑1 (MQ=255) caccacaatctgcgtagcagattgcttgggtgttatatggtcaagcctcacgggcaattagtattggttagctcaacgcctcacagcgcttacacacccaacctatcaacgtcgtagtcttcgacggccctttaggggattcaagatccc > 2:279851‑M1/1‑1 (MQ=255) | GAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACA‑CCCAAGCAATTTGCTGACGCAGATTGCGGTGGTGAAGACGAAAGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTGGCAACAGAATTTCTTGACGACCATAG > NC_002947/181384‑181682 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |