BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2087477 =	83 (0.540)	11 (0.080)	5/260	NT	12.8%	intergenic (+221/‑374)	PP_1864/PP_1865	hypothetical protein/transposase
*	?	NC_002947	2089647 =	72 (0.500)	11 (0.080)	5/260	NT	12.8%	intergenic (+495/+423)	PP_1865/aroH	transposase/3‑deoxy‑7‑phosphoheptulonate synthase

Only 100 of 106 total aligned reads displayed.

CTTTTGCTTCTAAGCGCGCGGTAGTTCAGGCGATGCAGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTG  >  NC_002947/2087329‑2087626

gtaaccaaaaccgtcggctcccatcatccggcccctacgctacgctccggggtcccctcactccgggcttgctcccgggaggaccgcgctgcaggccccatcctggggcccagcgcttgacgggcatccatgcccgtcacctccctccGc                                                                                                                                                      <  2:3698125‑M1/2‑1 (MQ=255)

  aaccaaaaccgtcggctcccatcatccggcccctacgctacgctccggggtcccctcactccgggcttgctcccgggaggaccgcgctgcaggccccatcctggggcccagcgcttgacgggcatccatgcccgtcacctccctccGCaa                                                                                                                                                    >  1:1043066‑M1/147‑150 (MQ=255)

  aaccaaaaccgtcggctcccatcatccggcccctacgctacgctccggggtcccctcactccgggcttgctcccgggaggaccgcgctgcaggccccatcctggggcccagcgcttgacgggcatccatgcccgtcacctccctccGCaa                                                                                                                                                    >  2:2013938‑M1/147‑150 (MQ=255)

  aaccaaaaccgtcggctcccatcatccggcccctacgctacgctccggggtcccctcactccgggcttgctcccgggaggaccgcgctgcaggccccatcctggggcccagcgcttgacgggcatccatgcccgtcacctccctccGCaa                                                                                                                                                    >  1:1700547‑M1/147‑150 (MQ=255)

    ccaaaaccgtcggctcccatcatccggcccctacgctacgctccggggtcccctcactccgggcttgctcccgggaggaccgcgctgcaggccccatcctggggcccagcgcttgacgggcatccatgcccgtcacctccctccGCAAGc                                                                                                                                                  >  1:962739‑M1/145‑150 (MQ=255)

     caaaaccgtcggctcccatcatccggcccctacgctacgctccggggtcccctcactccgggcttgctcccgggaggaccgcgctgcaggccccatcctggggcccagcgcttgacgggcatccatgcccgtcacctccctccGCAAGcc                                                                                                                                                 <  2:3479798‑M1/7‑1 (MQ=255)

      aaaaccgtcggctcccatcatccggcccctacgctacgctccggggtcccctcactccgggcttgctcccgggaggaccgcgctgcaggccccatcctggggcccagcgcttgacgggcatccatgcccgtcacctccctccGCAAGccc                                                                                                                                                >  1:3786642‑M1/143‑150 (MQ=255)

       ttCTAAGCGCGCGGTAGTTCAGGCGATGCAGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCg                                                                                                                                               >  2:3892965/1‑150 (MQ=32)

       ttCTAAGCGCGCGGTAGTTCAGGCGATGCAGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCg                                                                                                                                               >  2:3893095/1‑150 (MQ=32)

       ttCTAAGCGCGCGGTAGTTCAGGCGATGCAGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCg                                                                                                                                               >  1:1666863/1‑150 (MQ=32)

       ttCTAAGCGCGCGGTAGTTCAGGCGATGCAGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCg                                                                                                                                               <  1:4054824/150‑1 (MQ=32)

       ttCTAAGCGCGCGGTAGTTCAGGCGATGCAGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCg                                                                                                                                               >  2:2855423/1‑150 (MQ=32)

       ttCTAAGCGCGCGGTAGTTCAGGCGATGCAGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCg                                                                                                                                               >  1:5058521/1‑150 (MQ=32)

       ttCTAAGCGCGCGGTAGTTCAGGCGATGCAGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCg                                                                                                                                               >  2:1371382/1‑150 (MQ=32)

        tCTAAGCGCGCGGTTGATCAGGCGCTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGcccta                                                                                                                                              <  1:3589303/150‑3 (MQ=11)

        tCTAAGCGCGCGGTAGTTCAGGCGATGCAGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCACGCCCgg                                                                                                                                              >  2:338676/1‑150 (MQ=17)

         cTAAGCGCGCGGTAGTTCAGGCGATGCAGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGa                                                                                                                                             <  2:2288316/150‑1 (MQ=32)

         cTAAGCGCGCGGTAGTTCAGGCGATGCAGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGa                                                                                                                                             <  1:4694165/150‑1 (MQ=32)

         cTAAGCGCGCGGTAGTTCAGGCGATGCAGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGa                                                                                                                                             >  1:1418253/1‑150 (MQ=32)

            gtcggctcccatcatccggcccctacgctacgctccggggtcccctcactccgggcttgcacccgggaggaccgcgctgcaggccccatcctggggcccagcgcttgacgggcatccatgcccgtcacctccctccGCAAgcccggcgcg                                                                                                                                          <  2:928334‑M1/14‑5 (MQ=255)

             gcgcgcGGTAGTTCAGGCGATGCAGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGa                                                                                                                                         <  1:5021637/150‑1 (MQ=32)

              cgcgcgGTAGTTCAGGCGATGCAGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAg                                                                                                                                        <  1:3112152/150‑1 (MQ=32)

                cgcgGTAGTTCAGGCGATGCAGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAggg                                                                                                                                      <  2:966977/150‑1 (MQ=32)

                 gcgGTAGTTCAGGCGATGCAGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAgggg                                                                                                                                     >  1:1065812/1‑150 (MQ=32)

                        ttCAGGCGATGCAGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCgg                                                                                                                              >  2:3708443/1‑150 (MQ=32)

                        ttCAGGCGATGCAGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCgg                                                                                                                              >  2:382156/1‑150 (MQ=32)

                         tctggCGATGCAGATTGCGACTTCCGGAGGCCGAGCGCAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGa                                                                                                                             <  1:4142472/147‑1 (MQ=17)

                         tCAGGCGATGCAGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGGAGGGTGGTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGa                                                                                                                             <  1:3529436/150‑1 (MQ=17)

                                                  ggaggCCGAGCGCAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAggg                                                                                                    <  2:2539586/150‑1 (MQ=32)

                                                      cccccactccgggcttgctcccgggaggaccgcgctgcaggccccatcctggggcccagcgcttgacgggcatccatgcccgtcacctccctccGCAAGCCCTGCGGGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGAGGAGGGGAGc                                                                                                <  2:3783551‑M1/56‑1 (MQ=255)

                                                       cctcactccgggcttgctcccgggaggaccgcgctgcaggccccatcctggggcccagcgcttggcgggcatccatgcccgtcacctccctccGCAAGCCCTGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGcc                                                                                               <  2:4004288‑M1/57‑1 (MQ=255)

                                                       cctcactccgggcttgctcccgggaggaccgcgctgcaggccccatcctggggcccagcgcttgacgggcatccatgcccgtcacctccctccGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGcc                                                                                               <  1:684598‑M1/57‑1 (MQ=255)

                                                         gAGCGCAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCCGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGa                                                                                             <  2:3479158/150‑1 (MQ=17)

                                                         gAGCGCAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGa                                                                                             >  2:5013361/1‑150 (MQ=32)

                                                             tccgggcttgctcccgggaggaccgcgctgcaggccccatcctggggcccagcgcttgacgggcatccatgcccgtcacctcccttcGCAAGCCCTGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGAtaggagccagcgtt                                                                                         <  2:602284‑M1/63‑7 (MQ=255)

                                                             tccgggcttgctcccgggaggaccgcgctgcaggccccatcctggggcccagcgcttgacgggcatccatgcccgtcacctccctccGCAAGCCCTGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGAcggt                                                                                         <  2:798406‑M1/63‑2 (MQ=255)

                                                             tccgggcttgctcccgggaggaccgcgctgcaggccccatcctggggcccagcgcttgacgggcatccatgcccgtcacctccctccGCAAGCCCAGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGc                                                                                         <  1:2822011‑M1/63‑1 (MQ=255)

                                                              cAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCt                                                                                        >  1:550193/1‑150 (MQ=33)

                                                               cgggcttgctcccgggaggaccgcgctgcaggccccatcctggggcccagcgcttgacgggcatccatgcccgtcacctccctccGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCtt                                                                                       <  2:4211732‑M1/65‑1 (MQ=255)

                                                               cgggcttgctcccgggaggaccgcgctgcaggccccatcctggggcccagcgcttgacgggcatccatgcccgtcacctccctccGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCtt                                                                                       <  1:1219614‑M1/65‑1 (MQ=255)

                                                                 ggcttgctcccgggaggaccgcgctgcaggccccatcctggggcccagcgcttgacgggcatccatgcccgtcacctccctccGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGgttttt                                                                                     <  1:1913862‑M1/67‑2 (MQ=255)

                                                                    ttGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGtt                                                                                  >  2:311551/1‑150 (MQ=34)

                                                                    ttGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGtt                                                                                  >  2:311638/1‑150 (MQ=34)

                                                                     tGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTa                                                                                 <  2:307519/150‑1 (MQ=34)

                                                                         gtgggaggTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCTGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACttt                                                                             <  2:2311437/148‑1 (MQ=21)

                                                                         gagggaggTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACttt                                                                             <  2:4541337/150‑1 (MQ=34)

                                                                         gagggaggTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACttt                                                                             <  2:4541164/150‑1 (MQ=34)

                                                                           gggaggTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTgg                                                                           >  2:1433928/1‑150 (MQ=34)

                                                                            ggtggTGACGGGCATGGATGCCCGTAAAGCGCTGGGCCCCTGTATGGGGCCTGCAGCGCGGTCCTCCCGGGTGCAAGCCCGGTGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGc                                                                          <  1:1175007/147‑1 (MQ=11)

                                                                            ggcggTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCTGGTTGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCGGGAGTGAGGGGACCCCGGAGCGTAGCGTTGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGc                                                                          <  1:1175214/147‑1 (MQ=11)

                                                                            ggaggTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGTGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGc                                                                          >  2:1429732/1‑150 (MQ=21)

                                                                                ttGACGGGCATCCATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGCCACg                                                                      >  1:2063461/2‑150 (MQ=21)

                                                                                  taCGGGCATGGATCCCCTTCAAGCGCTGGGCCCCAGCATGGGGCATCCAGCGCGGTCCTCCCGGTAGAAACCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGCCACGAc                                                                    <  1:1540961/149‑1 (MQ=11)

                                                                                  gACGGGCATCCATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGCCACGAc                                                                    >  1:4298928/1‑150 (MQ=21)

                                                                                   aCGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGAGGAGGGGAGCCGACGGCTTTGGTTACTTTGGCCACGAcc                                                                   >  2:1340781/1‑150 (MQ=21)

                                                                                       gCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGCCACGACCAAAg                                                               >  1:303778/1‑150 (MQ=34)

                                                                                       gCATGGAGGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCCGCGCGGTCCTCCCGGGAGCACGCCCGGAGTGTGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGCCACGACCAAAg                                                               <  1:898583/150‑1 (MQ=255)

                                                                                          tGGATGCCCGTCAAGCGCGGGGCCCCTGGTTGGGGCCTGCAGCGCGGTCCTCCCGGTAGCAAGCCCGGTGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGCCACGACCAAAGTaa                                                            <  1:4459949/150‑1 (MQ=11)

                                                                                           ggATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGCCACGACCAAAGTAAc                                                           <  2:493512/150‑1 (MQ=34)

                                                                                           ggATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGCCACGACCAAAGTAAc                                                           >  1:3854867/1‑150 (MQ=34)

                                                                                           ggATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGCCACGACCAAAGTAAc                                                           >  2:437735/1‑150 (MQ=34)

                                                                                              tGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGCCACGACCAAAGTAACccg                                                        >  1:4896732/1‑150 (MQ=34)

                                                                                               gCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGCCACGACCAAAGTAACccgc                                                       >  1:3187334/1‑150 (MQ=34)

                                                                                                cccGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGCCACGACCAAAGTAACccgcc                                                      >  1:1085333/1‑150 (MQ=34)

                                                                                                 ccGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGCCACGACCAAAGTAACccgccg                                                     >  1:381838/1‑150 (MQ=34)

                                                                                                 ccGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGCCACGACCAAAGTAACccgccg                                                     >  1:4212259/1‑150 (MQ=34)

                                                                                                 ccGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGCCACGACCAAAGTAACccgccg                                                     >  1:4838609/1‑150 (MQ=34)

                                                                                                 ccGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGCCACGACCAAAGTAACccgccg                                                     >  1:1602557/1‑150 (MQ=34)

                                                                                                 ccGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGCCACGACCAAAGTAACccgccg                                                     >  2:1953489/1‑150 (MQ=34)

                                                                                                  cGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCgg                                                    >  2:792004/1‑150 (MQ=34)

                                                                                                   gTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGa                                                   >  2:1917090/1‑150 (MQ=34)

                                                                                                       aGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAggg                                               >  1:2558627/1‑150 (MQ=34)

                                                                                                          gcTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCgg                                            >  2:2964177/1‑150 (MQ=34)

                                                                                                           cTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGa                                           >  1:1772899/1‑150 (MQ=34)

                                                                                                            cccagcgcttgacgggcatccatgcccgtcacctccctccGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGaa                                          <  2:431594‑M1/110‑1 (MQ=255)

                                                                                                             gggCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGaaa                                         >  2:2150454/1‑150 (MQ=34)

                                                                                                              ggCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAg                                        >  2:4272999/1‑150 (MQ=34)

                                                                                                               agcgcttgacgggcatccatgcccgtcacctccctccGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGACGGGCGGACAgg                                       <  2:4486056‑M1/113‑1 (MQ=255)

                                                                                                                  ccAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGa                                    >  2:1873809/1‑150 (MQ=34)

                                                                                                                   cAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGaa                                   >  1:1965535/1‑150 (MQ=34)

                                                                                                                    tggttGGGGCCTGCAGCGGGGTCCTCCGGGTTGCACGCCCGGTGTGAGGGGACCCCGTTGCGTCGCTTAGGGGCCGGATGAGGGGCGCCGACGGCTTTGTTTACTTTGGCCACGACAAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAAt                                  <  2:5058521/146‑1 (MQ=11)

                                                                                                                      gATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAg                                >  2:3839194/1‑150 (MQ=34)

                                                                                                                      gATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAg                                >  2:1765102/1‑150 (MQ=34)

                                                                                                                       aTGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAgg                               >  2:485417/1‑150 (MQ=34)

                                                                                                                          gggCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGgcgc                            >  2:2581124/1‑150 (MQ=34)

                                                                                                                            gCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGGAAGGTGAATAGGCGccg                          >  2:2932396/1‑149 (MQ=21)

                                                                                                                            gCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCt                          >  2:2932407/1‑150 (MQ=34)

                                                                                                                            gCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCt                          >  1:1682164/1‑150 (MQ=34)

                                                                                                                             ccTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGccgg                         >  2:2196069/1‑148 (MQ=21)

                                                                                                                              cTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGCAAGGTGAATAGGCGCCTGc                        >  2:236328/1‑150 (MQ=25)

                                                                                                                              cTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGACAGGTGAATAGGCGCCGGc                        >  2:236040/1‑150 (MQ=21)

                                                                                                                                     gcgGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGtga                 >  2:3410455/1‑150 (MQ=37)

                                                                                                                                      cgGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGtgaa                >  2:1245265/1‑150 (MQ=37)

                                                                                                                                       ggTCCCCCGGGTAGCATGCCGGGTTTGGGGGGACCCGGGCGGTTAGCGTTGGGGCGGTATGTGGGGAGCCGAGGGTTTTGGTTACTTTGGCCACGACAAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGtgaat               <  1:4266415/150‑1 (MQ=11)

                                                                                                                                       ggTCCCCCGGGTAGCACGCGGGGTGTGTGGGGACCCGGGCGGTTTGGGTGGGGGCGGGTTGTGGGGCGCCGCGGGTTTTGGTTACTTTGGCCACGACAAATTAAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGtgaat               <  1:1686716/150‑1 (MQ=2)

                                                                                                                                            tccCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCCTCGTGaatgaatg          >  1:815239/1‑150 (MQ=37)

                                                                                                                                            tccCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGaatgaatg          >  1:283017/1‑150 (MQ=37)

                                                                                                                                              cgggtaGCACGCCGGGTGGGCGGGGACCCCGGAGCGTAGCTTAGGGGCCGGTTGCGGGGAGCCGACGGCTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTc        <  2:1567498/145‑1 (MQ=11)

                                                                                                                                                   aGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACtt   >  2:212567/1‑150 (MQ=37)

                                                                                                                                                    GCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTg  <  2:3610743‑M1/150‑1 (MQ=255)

CTTTTGCTTCTAAGCGCGCGGTAGTTCAGGCGATGCAGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGAGGGGAGCCGACGGCTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTGCATCGTGAATGAATGTCTACTTG  >  NC_002947/2087329‑2087626

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.