New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2416702 =90 (0.590)15 (0.100) 5/260 NT 16.8% intergenic (+279/‑66) PP_2114/PP_2115 transposase/hypothetical protein
?NC_002947 2532754 = 64 (0.450)coding (28/369 nt) PP_2219 hypothetical protein

Only 100 of 123 total aligned reads displayed.

AGCGAACAGTCCATTCGCGATGGCGACACTGACTCACCTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAG  >  NC_002947/2416553‑2416851
                                                                                                                                                     |                                                                                                                                                     
tctgtgcccatccacctgctgttgccgttgccgttgccgttgccgttgccgttgccgttgccgttgccgttgatcttgatcttgatcttgatcttgatcttgatcttgatcttgatcttgatcttcgcgacttcaggaggccgaacgcag                                                                                                                                                       >  2:4057092‑M1/150‑150 (MQ=255)
aGCGAACAGTCCATTCGCGATGGCGACACTGACTCACCTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCg                                                                                                                                                       <  2:2704590/150‑1 (MQ=255)
aGCGAACAGTCCATTCGCGATGGCGACACTGACTCACATTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCg                                                                                                                                                       <  1:4731952/150‑1 (MQ=255)
 gCGAACAGTCCATTCGCGATGGCGACACTGACTCACCTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCgg                                                                                                                                                      <  2:1225082/150‑1 (MQ=255)
 gCGAACAGTCCATTCGCGATGGCGACACTGACTCACCTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCgg                                                                                                                                                      >  2:4150967/1‑150 (MQ=255)
 ctgtgcccatccacctgctgttgccgttgccgttgccgttgccgttgccgttgccgttgccgttgccgttgatcttgatcttgatcttgatcttgatcttgatcttgatcttgatcttgatcttcgcgacttcaggaggccgaacgcagg                                                                                                                                                      >  2:269881‑M1/149‑150 (MQ=255)
  cGAACAGTCCATGCGCGATGGCGACACTTACTCACCTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGc                                                                                                                                                     <  1:84404/150‑1 (MQ=255)
   gAACAGTCCATTCGCGATGGCGACACTGACTCACCTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGcc                                                                                                                                                    >  1:407563/1‑150 (MQ=255)
     gcccatccacctgctgttgccgttgccgttgccgttgccgttgccgttgccgttgccgttgccgttgatcttgatcttgatcttgatcttgatcttgatcttgatcttgatcttgatcttcgcgacttcaggaggccgaacgcaGGCCtt                                                                                                                                                  <  2:4672093‑M1/6‑1 (MQ=255)
     aCAGTCCATTCGCGTGGGCGACACTGACTCACCTTTTCGCCGTTACGGCGAGTCAATTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCATCACTCCGGCCtt                                                                                                                                                  <  2:3845534/150‑1 (MQ=14)
     aCAGTCCATTCGCGATGGCGACACTGACTCACCTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCtt                                                                                                                                                  <  2:4065242/150‑1 (MQ=255)
      cccatccacctgctgttgccgttgccgttgccgttgccgttgccgttgccgttgccgttgccgttgatcttgatcttgatcttgatcttgatcttgatcttgatcttgatcttgatcttcgcgacttcaggaggccgaacgcaGGCCTTg                                                                                                                                                 >  1:2958967‑M1/144‑150 (MQ=255)
      cccatccacctgctgttgccgttgccgttgccgttgccgttgccgttgccgttgccgttgccgttgatcttgatcttgatcttgatcttgatcttgatcttgatcttgatcttgatcttcgcgacttcaggaggccgaacgcaGGCCTTg                                                                                                                                                 >  2:912601‑M1/144‑150 (MQ=255)
      cAGTCCATTCGCGATGGCGACACTGACTCACCTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTg                                                                                                                                                 <  1:2529356/150‑1 (MQ=40)
      cAGTCCATTCGCGATGGCGACACTGACTCACCTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTg                                                                                                                                                 <  1:3076121/150‑1 (MQ=40)
       ccatccacctgctgttgccgttgccgttgccgttgccgttgccgttgccgttgccgttgccgttgatcttgatcttgatcttgatcttgatcttgatcttgatcttgatcttgatcttcgcgacttcaggaggccgaacgcaGGCCTTGc                                                                                                                                                <  2:3808914‑M1/8‑1 (MQ=255)
         tCCATTCGCGATGGCGACACTGACTCACCTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCAGGCCTTGcga                                                                                                                                              <  2:16782/150‑3 (MQ=255)
            aTTCGCGATGGCGACACTGACTCACCTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCGCACACCGGGCGTGGTCCCg                                                                                                                                           >  1:965404/1‑150 (MQ=11)
             ttCGCGATGGCGACACTGACTCACCTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCgg                                                                                                                                          <  2:407563/150‑1 (MQ=37)
             ttCGCGATGGCGACACTGACTCACCTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCGCACGCCCGCCATGCTccccg                                                                                                                                          >  1:2476580/1‑148 (MQ=255)
                gcgATGGCGACACTGACTCACCTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAg                                                                                                                                       <  1:4708114/150‑1 (MQ=34)
                      gCGACACTGACTCACCTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACcgc                                                                                                                                 <  2:2931066/150‑1 (MQ=34)
                      gCGACACTGACTCACCTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCCGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACcgc                                                                                                                                 <  2:3727643/150‑1 (MQ=21)
                        gACACTGACTCACCTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCgcgc                                                                                                                               <  1:2803747/150‑1 (MQ=34)
                        gACACTGACTCACCTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACACCCGCCAAGCTCCCCGCACGACcgccc                                                                                                                               >  1:3931843/1‑148 (MQ=11)
                         acacTGACTCACCTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGcc                                                                                                                              <  1:5112685/150‑1 (MQ=34)
                            cTGACTCACCTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGaa                                                                                                                           <  1:1682912/150‑1 (MQ=32)
                             tGACTCACCTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAg                                                                                                                          <  2:4197170/150‑1 (MQ=32)
                             tGACTCACCTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCAGCGCTGCGCTCCGGGGTCCCCTCACTCCCGCCATGCTCCCGGCAGGACCCCGCCGAAg                                                                                                                          >  2:4439082/1‑150 (MQ=255)
                                   aCCTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCa                                                                                                                    >  2:5100763/1‑150 (MQ=32)
                                   aCCTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCGCACACCGGCCGTGCTCCCCGCAGGACCCCCCCCAACGccccc                                                                                                                    >  1:3609475/1‑149 (MQ=11)
                                    ccTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCAt                                                                                                                   >  2:317728/1‑150 (MQ=32)
                                      ttttCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCCTcc                                                                                                                 >  2:4186332/1‑150 (MQ=17)
                                      ttttCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATcc                                                                                                                 >  1:2513819/1‑150 (MQ=32)
                                      ttttCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCGCCCAACCGCCATTCTCCCCGCAGGACCGCGCCCAAGGcccccacc                                                                                                                 >  1:984225/1‑146 (MQ=11)
                                        ttCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCATGACCGCGCCGAAGGCCCCATCCTg                                                                                                               <  2:1501481/150‑1 (MQ=17)
                                        tgccgttgccgttgccgttgccgttgccgttgatcttgatcttgatcttgatcttgatcttgatcttgatcttgatcttgatcttcgcgacttcaggaggccgaacgcaGGCCTTGCGGAGGCAGGACCGCGCCGAAGGCCCCATCCTgg                                                                                                              >  2:1936683‑M1/110‑150 (MQ=255)
                                         tCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCaggatgg                                                                                                              <  2:175394/150‑7 (MQ=14)
                                         tCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTgg                                                                                                              <  1:2834668/150‑1 (MQ=31)
                                         tCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTgg                                                                                                              <  2:1766835/150‑1 (MQ=31)
                                          cGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTggg                                                                                                             <  1:1518238/150‑1 (MQ=11)
                                          cGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTggg                                                                                                             <  1:1397639/150‑1 (MQ=11)
                                          cGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTggg                                                                                                             <  2:1512657/150‑1 (MQ=11)
                                                             tattgctgttgctgttgctgttgatcttgatcttgatcttgatcttgatcttgatcttgatcttcgcgacttcaggaggccgaacgcaGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGc                                                                                          >  1:2765006‑M1/89‑150 (MQ=255)
                                                                 gccgttgatcttgatcttgatcttgatcttgatcttgatcttgatcttgatcttgatcttcgcgacttcaggaggccgaacgcaGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATcc                                                                                      >  1:405272‑M1/85‑150 (MQ=255)
                                                                 gatcttgatcttgatcttgatcttgatcttgatcttgatcttgatcttgatcttgatcttcgcgacttcaggaggccgaacgcaGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATcc                                                                                      >  2:1403640‑M1/85‑150 (MQ=255)
                                                                        ctcttgatcttgctcttgatcttgctcttgatcttgatcttgatcttgatcgtcgcgacttcaggaggccgaacgcaGGCCTTGCGGAGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGt                                                                              >  2:2054100‑M1/78‑150 (MQ=255)
                                                                           ttgctgttgatcttgatcttgatcttgatcttgatcttgatcttgatcttcgcgacttcaggaggccgaacgcaGGCCTTGCGGAGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCAc                                                                           >  1:1644988‑M1/75‑150 (MQ=255)
                                                                             gatctggcttttgatctggcttttgatcttgatcttgatcttgatcttcgcgacttcaggaggccgaacgcaGGCCTTGCGGAGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCt                                                                         >  2:3564305‑M1/73‑150 (MQ=255)
                                                                              atcttgatcttgatcttgatcttgatcttgatcttgatcttgatcttcgcgacttcaggaggccgaacgcaGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCt                                                                         >  1:2736069‑M1/72‑150 (MQ=255)
                                                                                   gatcttgatcttgatcttgatcttgatcttgatcttgatcttcgcgacttcaggaggccgaacgcaGGCCTTGCGAAGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTc                                                                   >  2:840113‑M1/67‑150 (MQ=255)
                                                                                    tAACCAAAAAACGCTGCGCTCTCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTc                                                                   <  2:1437057/150‑1 (MQ=14)
                                                                                    tAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTc                                                                   <  1:2211458/150‑1 (MQ=31)
                                                                                    tAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTc                                                                   <  2:2753834/150‑1 (MQ=31)
                                                                                        tgatcttgatcttgatcttgatcttgatcttgatcttcgcgacttcaggaggccgaacgcaGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCaa                                                               >  2:763623‑M1/62‑150 (MQ=255)
                                                                                        cAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCGTCGCaa                                                               >  2:1991230/1‑150 (MQ=17)
                                                                                         aaaaaaCGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAg                                                              <  2:4221388/150‑1 (MQ=32)
                                                                                         aaaaaaCGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAg                                                              <  2:4501082/150‑1 (MQ=32)
                                                                                          aaaaaCGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTTCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAgg                                                             >  2:306967/1‑150 (MQ=17)
                                                                                          aaaaaCGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAgg                                                             <  1:1852102/150‑1 (MQ=32)
                                                                                           aaaaCGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGc                                                            <  2:4504954/150‑1 (MQ=32)
                                                                                            aaaCGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTc                                                                   >  2:5017891/1‑142 (MQ=31)
                                                                                            aaaCGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTc                                                                   <  1:5017891/142‑1 (MQ=31)
                                                                                             ttgatcttgatcttgatcttgatcttgatcttcgcgacttcaggaggccgaacgcaGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCt                                                          >  1:3609298‑M1/57‑150 (MQ=255)
                                                                                             ttgatcttgatcttgatcttgatcttgatcttcgcgacttcaggaggccgaacgcaGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCAAGGCCt                                                          >  1:35327‑M1/57‑150 (MQ=255)
                                                                                             aaCGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGGCGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCt                                                          <  2:2513819/150‑1 (MQ=17)
                                                                                               cGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGc                                                        <  1:2546902/150‑1 (MQ=32)
                                                                                               cGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGc                                                        <  2:1858047/150‑1 (MQ=32)
                                                                                                  tGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCGCACGCCGGCCGTGCTCCCCGCAGGACCGCGCCGAAGGCCCCAACCTGGGGCCTCAGCGCGTTACGGGCAACCATGCCCGGCCCCTGCCGTCGCAAGGCCGGCGtt                                                     >  2:517607/1‑150 (MQ=11)
                                                                                                   gcgcTCCCCTCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTc                                                    <  1:3646622/150‑1 (MQ=17)
                                                                                                   gcgcTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTc                                                    <  1:34307/150‑1 (MQ=32)
                                                                                                   gcgcTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTc                                                    <  1:34313/150‑1 (MQ=32)
                                                                                                      cTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGc                                                 <  1:635406/150‑1 (MQ=32)
                                                                                                      cTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGc                                                 <  1:635489/150‑1 (MQ=32)
                                                                                                        cccATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGTTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGTCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGcct                                               <  1:723258/150‑1 (MQ=17)
                                                                                                          catcatCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCACGGCCCGCGTTCGGcctcc                                             >  2:4739252/1‑150 (MQ=17)
                                                                                                          catcatCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGcctcc                                             <  2:658447/150‑1 (MQ=32)
                                                                                                           ctcatcCGGCGCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCAGAAGGCCCCATCCTGGGGCCTCTGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGAGTTCGGcctcct                                            <  1:911411/149‑1 (MQ=255)
                                                                                                                ccGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGt                                       <  1:4531354/150‑1 (MQ=32)
                                                                                                                  ggCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTcg                                     <  1:3664884/150‑1 (MQ=32)
                                                                                                                   gCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTcgc                                    <  1:5100763/150‑1 (MQ=32)
                                                                                                                      ccTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaa                                 <  2:3958279/150‑1 (MQ=32)
                                                                                                                      ccTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaa                                 <  2:1966042/150‑1 (MQ=32)
                                                                                                                      ccTGCGCGGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaa                                 <  2:3958322/150‑1 (MQ=17)
                                                                                                                        tgcgctgcgcTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaaga                               <  1:4512425/150‑1 (MQ=32)
                                                                                                                        tgcgctgcgcTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaaga                               <  2:3993036/150‑1 (MQ=32)
                                                                                                                            ctgcgctCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaa                           <  1:1196400/150‑1 (MQ=32)
                                                                                                                                  tCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTTCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaa                     <  1:218354/150‑1 (MQ=17)
                                                                                                                                  tCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCGCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaa                     >  2:3618996/1‑150 (MQ=17)
                                                                                                                                  tCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCGCAGCGCTTGACGGGCATCCATGCCCGTCACCAGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaa                     >  2:3619005/1‑150 (MQ=17)
                                                                                                                                         tCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaag              <  2:3609475/150‑1 (MQ=32)
                                                                                                                                            ccTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAGGTCGCGaagatcaagatcaagatcaagatc           >  1:399621/1‑150 (MQ=17)
                                                                                                                                            ccTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatc           <  1:2293378/150‑1 (MQ=32)
                                                                                                                                            ccTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCAAACAAGCCCGTCACCTGCCATCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaatatcaagatcaagatc           >  1:885434/1‑150 (MQ=11)
                                                                                                                                             cTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatca          >  1:4645163/1‑150 (MQ=32)
                                                                                                                                             cTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatca          >  2:973214/1‑150 (MQ=32)
                                                                                                                                               cACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaag        <  1:1627788/150‑1 (MQ=32)
                                                                                                                                                aCTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaaga       <  2:2476580/150‑1 (MQ=32)
                                                                                                                                                   ccGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatca    <  2:965404/150‑1 (MQ=32)
                                                                                                                                                     GGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaatatcaagatcaagatcaagatcaag  >  1:4439082‑M1/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
AGCGAACAGTCCATTCGCGATGGCGACACTGACTCACCTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAG  >  NC_002947/2416553‑2416851

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.