New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 336235	41 (0.270)	8 (0.070)	6/222	NT	16.5%	intergenic (+80/+313)	PP_0278/PP_0279	hypothetical protein/hypothetical protein
	?	NC_002947	= 336301	48 (0.390)					intergenic (+146/+247)	PP_0278/PP_0279	hypothetical protein/hypothetical protein

TGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCAAACGCCTGTTTTTACTGGGCTGCA  >  NC_002947/336153‑336450                                                                                                                                                       |                                                                                                                                                      ttatgaacTATATCGAGATCGCCAAGGTTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCTATTGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCTt                                                                                                                                                      >  1:2730944‑M2/3‑149 (MQ=255)  gatgaACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCTtt                                                                                                                                                     >  2:1402794‑M2/1‑148 (MQ=255)   atgaACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCTttc                                                                                                                                                    >  1:326001‑M2/1‑147 (MQ=255)       aCGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCTttcgcga                                                                                                                                                >  1:1468885‑M2/1‑143 (MQ=255)          atatCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCTttcgcgacgc                                                                                                                                             >  1:4352191‑M2/1‑140 (MQ=255)          atatCGAGATCGCCAAGGGTAAGGCGCATTAGGAATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCTttcgcgacgc                                                                                                                                             >  1:4352557‑M2/1‑140 (MQ=255)                agaTCGCCAAGGGTAAGGCGCATTAGGCTTTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCATttcgcgacgcaaggcc                                                                                                                                       >  2:1778144‑M2/1‑134 (MQ=255)                                                                   cGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGt                                                                                    >  2:4504932/1‑150 (MQ=255)                                                                   cGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACG‑‑GGGGCCGCGTTGCGGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGt                                                                                    >  1:4608360/1‑150 (MQ=255)                                                                       cTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCTttcgcgacgcaaggccgctcccacaaatgaccgcgtcaatgcctaatgcgccttacccttggcgatctcga                                                                                <  1:1177706‑M2/150‑72 (MQ=255)                                                                            gTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCTTTTgg                                                                           >  1:4781712/1‑150 (MQ=255)                                                                            gTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTgg                                                                           >  1:1541508/1‑150 (MQ=255)                                                                            gTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTgg                                                                           >  1:1541368/1‑150 (MQ=255)                                                                            gTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTgg                                                                           >  1:4781913/1‑150 (MQ=255)                                                                             tCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTggg                                                                          >  2:1492914/1‑150 (MQ=255)                                                                             tCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTggg                                                                          >  2:1492697/1‑150 (MQ=255)                                                                                     gggCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGc                                                                  >  1:908466/1‑150 (MQ=255)                                                                                      ggCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCg                                                                 >  1:1524292/1‑150 (MQ=255)                                                                                       gCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCTttcgcgacgcaaggccgctcccacaaatgaccgcgtcaatgcctaatgcgccttacccttggcgatctcgatatcgttcatcagcgc                                                                <  1:209989‑M2/150‑88 (MQ=255)                                                                                       gCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCTttcgcgacgcaaggccgctcccacaaatgaccgcgtcaatgcctaatgcgccttacccttggcgatctcgatatcgttcatcagcgc                                                                <  2:2710516‑M2/150‑88 (MQ=255)                                                                                       gCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCAttcgcgacgcaaggccgctcccacaaatgaccgcgtcaatgcctaatgcgccttacccttggcgatctcgatatcgttcatcagcgc                                                                <  2:2632313‑M2/150‑88 (MQ=255)                                                                                        cTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCTttcgcgacgcaaggccgctcccacaaatgaccgcgtcaatgcctaatgcgccttacccttggcgatctcgatatcgttcatcagcgcc                                                               <  1:4990223‑M2/150‑89 (MQ=255)                                                                                         tGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGaaa                                                              >  1:2283876/1‑150 (MQ=255)                                                                                            aaaGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCTttcgcgacgcaaggccgctcccacaaatgaccgcgtcaatgcctaatgcgccttacccttggcgatctcggtatcgttcatcagcgccttgg                                                           <  1:3843930‑M2/150‑93 (MQ=255)                                                                                            aaaGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACACGAAATGTTTATGCACCAGTGGCAGGTGGGACCTGAGCGAAAGGc                                                           >  2:705023/1‑150 (MQ=255)                                                                                            aaaGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAAAG‑‑GGGGCCGCTTTGCGGCACTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGc                                                           >  2:2749918/1‑150 (MQ=255)                                                                                              agcagcCCCGGCGATTTCAGAGATTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCAt                                                         >  2:2733051/1‑150 (MQ=255)                                                                                               gcagcCCCGGCGATTTCAGAGATTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATg                                                        >  1:4285269/1‑150 (MQ=255)                                                                                               gcagcCCCGGCGATTTCAGAGATTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATg                                                        >  1:1948529/1‑150 (MQ=255)                                                                                               gcagcCCCGGCGATTTCAGAGATTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATg                                                        >  1:1948641/1‑150 (MQ=255)                                                                                                   ccccGGCGATTTCAGAGATTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCgg                                                    >  2:4092154/1‑150 (MQ=255)                                                                                                   ccccGGCGATTTCAGAGATTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCgg                                                    >  2:3423140/1‑150 (MQ=255)                                                                                                   ccccGGCGATTTCAGAGATTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCgg                                                    >  2:1574587/1‑150 (MQ=255)                                                                                                      cGGCGATTTCAGAGATTGCGCTGAAAACGCCGGGGCTGCTTTGCAGCCCAttcgcgacgcaaggccgctcccacaaatgaccgcgtcaatgcctaatgcgccttacccttggcgatctcgatatcgttaatcagcgccttggccatgtcg                                                   <  1:4848717‑M2/150‑101 (MQ=255)                                                                                                      cGGCGATTTCAGAGATTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGaaa                                                              <  2:3639396/137‑1 (MQ=255)                                                                                                      cGGCGATTTCAGAGATTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGaaa                                                              >  1:3639396/1‑137 (MQ=255)                                                                                                      cGGCGATTTCAGAGATTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGaaa                                                              >  1:3639391/1‑137 (MQ=255)                                                                                                      cGGCGATTTCAGAGATTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGaaa                                                              <  2:3639391/137‑1 (MQ=255)                                                                                                       ggCGATTTCAGAGATTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCg                                                >  1:4006426/1‑150 (MQ=255)                                                                                                               cAGAGATTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTAcgccg                                        >  2:4458436/1‑150 (MQ=255)                                                                                                               cAGAGATTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTAcgccg                                        >  2:4458479/1‑150 (MQ=255)                                                                                                               cAGAGATTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCAGTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTAcgccg                                        >  2:4458491/1‑150 (MQ=255)                                                                                                                agagATTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTAcgccgc                                       >  1:2656460/1‑150 (MQ=255)                                                                                                                agagATTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTAcgccgc                                       >  1:3345607/1‑150 (MQ=255)                                                                                                                agagATTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTAcgccgc                                       >  1:1415473/1‑150 (MQ=255)                                                                                                                agagATTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTAcgccgc                                       >  2:107146/1‑150 (MQ=255)                                                                                                                agagATTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCAttcgcgacgcaaggccgctcccacaaatgaccgcgtcaatgcctaatgcgccttacccttggcgatctcgatatcgttcatcagcgccttggccatgtcgcacaggtaatcg                                       <  2:2148912‑M2/150‑113 (MQ=255)                                                                                                                 gagaTTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCAttt                                                                             >  2:3359791/1‑111 (MQ=255)                                                                                                                 gagaTTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCAttt                                                                             <  1:3359791/111‑1 (MQ=255)                                                                                                                 gagaTTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCt                                      >  2:2511475/1‑150 (MQ=255)                                                                                                                             aaaaCG‑‑GGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCTGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCa                          >  2:1592446/1‑150 (MQ=255)                                                                                                                              aaaCG‑‑GGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCaa                         >  1:3175653/1‑150 (MQ=255)                                                                                                                                gcgaaagggCCGCAAAGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCaa                         >  2:1086732/7‑150 (MQ=39)                                                                                                                                aCG‑‑GGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCAAAc                       >  2:2513926/1‑150 (MQ=255)                                                                                                                                  gaaagggCCGCAAAGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCAAAc                       >  1:1562156/5‑150 (MQ=255)                                                                                                                                  gaaagggCCGCAAAGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTGATGCACAAGTGGCATTTGGGACCTGAGCGACAGGCATGCCGGATCGCTCCGCCGCTGGTCTTTGCGCAAAc                       >  1:1371456/5‑150 (MQ=38)                                                                                                                                     ggggCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCAAACGcc                    >  2:1725075/1‑150 (MQ=255)                                                                                                                                     ggggCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCAAACGcc                    >  2:1725026/1‑150 (MQ=255)                                                                                                                                        gCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTCGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCAAACGCCTGt                 >  1:2375691/1‑150 (MQ=255)                                                                                                                                          tgCTTTGCAGCCCATTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCAAACGCCTGttt               >  2:2389297/2‑150 (MQ=255)                                                                                                                                          cGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGAc                                                                        >  2:378350/1‑93 (MQ=255)                                                                                                                                          cGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGAc                                                                        <  1:378350/93‑1 (MQ=255)                                                                                                                                                 cGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCAAACGCCTGTTTTTACTgg        >  2:2431740/1‑150 (MQ=255)                                                                                                                                                   gCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTTCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCAAACGCCTGTTTTTACTGGGc      >  1:3765267/1‑150 (MQ=255)                                                                                                                                                     ccTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCAAACGCCTGTTTTTACTGGGCTg    >  1:3013335/1‑150 (MQ=255)                                                                                                                                                       tttCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCAAACGCCTGTTTTTACTGGGCTGCa  >  2:3925237/1‑150 (MQ=255)                                                                                                                                                       tttCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCAAACGCCTGTTTTTACTGGGCTGCa  >  1:940986/1‑150 (MQ=255)                                                                                                                                                       tttCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCAAACGCCTGTTTTTACTGGGCTGCa  >  1:118780/1‑150 (MQ=255)                                                                                                                                                       |                                                                                                                                                      TGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACG‑‑GGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCAAACGCCTGTTTTTACTGGGCTGCA  >  NC_002947/336153‑336450

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.