BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3524667 =	96 (0.630)	11 (0.100) +ATGCTCCAGCAGGCGCAACAGGCCTGGCATTGGCTC	3/204	NT	11.7%	intergenic (+489/‑208)	PP_5584/PP_3113	hypothetical protein/transposase
*	?	NC_002947	= 4497669	129 (0.850)	11 (0.100) +ATGCTCCAGCAGGCGCAACAGGCCTGGCATTGGCTC	3/204	NT	11.7%	coding (13/960 nt)	PP_3987	site‑specific recombinase

Only 100 of 185 total aligned reads displayed.

TTCGAAAGTCGACGGGCTTGGGGTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTCGCCTGCTCGGTGACGTCTTCAATCGGTATGAGCGTGATGTCATCCCTGGGAAAATGCCA  >  NC_002947/4497521‑4497818

ttCGAAAGTCGACGGGCTTGGGGTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACa                                                                                                                                                      <  1:963294/150‑1 (MQ=11)

 tCGAAAGTCGACGGGCTTGGGGTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACga                                                                                                                                                     >  2:3771845‑M2/1‑148 (MQ=255)

 tCGAAAGTCGACGGGCTTGGGGTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACga                                                                                                                                                     >  2:4703056‑M2/1‑148 (MQ=255)

 tCGAAAGTCGACGGGCTTGGGGTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACga                                                                                                                                                     >  2:4773373‑M2/1‑148 (MQ=255)

   gAAAGTCGACGGGCTTGGGGTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAgcg                                                                                                                                                   >  1:4411287/1‑150 (MQ=32)

   gAAAGTCGACGGGCTTGGGGTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAgcg                                                                                                                                                   >  2:4620099/1‑150 (MQ=32)

     aaGTCGACGGGCTTGGGGTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCa                                                                                                                                                 >  1:3863562/1‑150 (MQ=34)

          gACGGGCTTGGGGTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTgag                                                                                                                                            >  1:5031248/1‑150 (MQ=38)

           aCGGGCTTGGGGTAGATGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACATCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTgaga                                                                                                                                           <  1:360406/150‑1 (MQ=255)

           aCGGGCTTGGGGTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaatgcca                                                                                                                                           <  2:4718774‑M2/150‑13 (MQ=255)

           aCGGGCTTGGGGTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaatgcca                                                                                                                                           >  1:752906‑M2/1‑138 (MQ=255)

           aCGGGCTTGGGGTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaatgcca                                                                                                                                           >  1:3324883‑M2/1‑138 (MQ=255)

           aCGGGCTTGGGGTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaatgcca                                                                                                                                           >  1:17335‑M2/1‑138 (MQ=255)

            cGGGCTTGGGGTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaatgccag                                                                                                                                          >  2:115588‑M2/1‑137 (MQ=255)

                 ttGGGGTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaatgccaggcctg                                                                                                                                     <  2:2555518‑M2/150‑19 (MQ=255)

                  tGGGGTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCt                                                                                                                                    <  1:2807566/150‑1 (MQ=255)

                   ggggTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaatgccaggcctgtt                                                                                                                                   >  2:774581‑M2/1‑130 (MQ=255)

                   ggggTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaatgccaggcctgtt                                                                                                                                   >  2:1249913‑M2/1‑130 (MQ=255)

                      gTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGt                                                                                                                                >  2:253618/1‑150 (MQ=255)

                      gTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGt                                                                                                                                >  1:2041038/1‑150 (MQ=255)

                       tAGAGGTACACTTTTTAGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaatgacaggcctgttgcgc                                                                                                                               <  1:853862‑M2/150‑25 (MQ=255)

                           ggTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaatgccaggcctgttgcgcctgc                                                                                                                           <  1:2338493‑M2/150‑29 (MQ=255)

                           ggTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaatgccaggcctgttgcgcctgc                                                                                                                           <  2:1915839‑M2/150‑29 (MQ=255)

                           ggTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGa                                                                                                                           <  1:569509/150‑1 (MQ=255)

                            gTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaatgccaggcctgttgcgcctgct                                                                                                                          <  2:3493393‑M2/150‑30 (MQ=255)

                            gTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGAc                                                                                                                          >  2:288940/1‑150 (MQ=255)

                            gTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGAc                                                                                                                          >  2:53212/1‑150 (MQ=255)

                              acacTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACtt                                                                                                                        <  2:3424478/150‑1 (MQ=255)

                              acacTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACtt                                                                                                                        >  1:4720197/1‑150 (MQ=255)

                               cacTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaatgccaggcctgttgcgcctgctgga                                                                                                                       >  1:369360‑M2/1‑118 (MQ=255)

                               cacTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaatgccaggcctgttgcgcctgctgga                                                                                                                       >  2:1425473‑M2/1‑118 (MQ=255)

                                 cTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGa                                                                                                                     <  1:2397789/150‑1 (MQ=255)

                                 cTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGa                                                                                                                     >  1:4465483/1‑150 (MQ=255)

                                  tttttCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaatgccaggcctgttgcgcctgctggagca                                                                                                                    <  2:2767200‑M2/150‑36 (MQ=255)

                                  tttttCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaatgccaggcctgttgcgcctgctggagca                                                                                                                    <  2:1352792‑M2/150‑36 (MQ=255)

                                     ttCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaatgccaggcctgttgcgcctgctggagcatgc                                                                                                                 >  1:3957418‑M2/1‑112 (MQ=255)

                                     ttCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaatgccaggcctgttgcgcctgctggagcatgc                                                                                                                 >  1:1378405‑M2/1‑112 (MQ=255)

                                     ttCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACATCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTa                                                                                                                 <  2:5107266/150‑1 (MQ=255)

                                     ttCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTa                                                                                                                 >  2:4070912/1‑150 (MQ=255)

                                         aCTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaatgccaggcctgttgcgcctgctggagcatgcccag                                                                                                             >  2:704683‑M2/1‑108 (MQ=255)

                                          cTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaatgccaggcctgttgcgcctgctggagcatgcccagg                                                                                                            >  1:509041‑M2/1‑107 (MQ=255)

                                           tttGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaatgccaggcctgttgcgcctgctggagcatgcccaggc                                                                                                           >  1:2928255‑M2/1‑106 (MQ=255)

                                            ttGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGaaaa                                                                                                          <  2:2361195/150‑1 (MQ=255)

                                            ttGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGaaaa                                                                                                          <  1:2826118/150‑1 (MQ=255)

                                              ggCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAAtt                                                                                                        <  2:553892/150‑1 (MQ=255)

                                               gCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaatgccaggcctgttgcgcctgctggagcatgcccaggcccat                                                                                                       >  1:1951843‑M2/1‑102 (MQ=255)

                                                cGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaatgccaggcctgttgcgcctgctggagcatgcccaggcccatg                                                                                                      >  1:4592478‑M2/1‑101 (MQ=255)

                                                cGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGa                                                                                                      <  2:601392/150‑1 (MQ=255)

                                                 gTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGaa                                                                                                     <  2:4031944/150‑1 (MQ=255)

                                                 gTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGaa                                                                                                     <  1:4070912/150‑1 (MQ=255)

                                                 gTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGaa                                                                                                     <  1:907758/150‑1 (MQ=255)

                                                 gTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGaa                                                                                                     <  2:5010168/150‑1 (MQ=255)

                                                   cGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATg                                                                                                   <  1:4083896/150‑1 (MQ=255)

                                                    gggTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATgg                                                                                                  <  2:4541088/150‑1 (MQ=255)

                                                    gggTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATgg                                                                                                  <  2:3619898/150‑1 (MQ=255)

                                                     ggTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATggg                                                                                                 >  2:2964/1‑150 (MQ=255)

                                                         gCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaat                                                                                                                                               <  1:2446021‑M2/100‑9 (MQ=255)

                                                             catGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTc                                                                                         <  2:3689734/150‑1 (MQ=255)

                                                                ggTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGAc                                                                                      <  1:3994109/150‑1 (MQ=255)

                                                                ggTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGAc                                                                                      <  1:1946633/150‑1 (MQ=255)

                                                                  tCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCg                                                                                    >  1:4786933/1‑150 (MQ=255)

                                                                     gCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGaaa                                                                                 <  1:3528299/150‑1 (MQ=255)

                                                                       gAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGt                                                                               >  1:1589743/1‑150 (MQ=255)

                                                                           tCCAGTAAGTAATCGGGATCACTGCTTGGGGGTTCAGGTAAGCGCTTTGAATGTGGGTTTCTTGGAGCGCTTACAGCGCATTGTGATCCCGCTCGGTACCGAATTTGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGt                                                                           <  2:788963/150‑1 (MQ=25)

                                                                           tCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGt                                                                           <  1:1257899/150‑1 (MQ=255)

                                                                           tCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGt                                                                           <  2:2720208/150‑1 (MQ=255)

                                                                           tCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGt                                                                           <  2:1604063/150‑1 (MQ=255)

                                                                           tCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGt                                                                           >  2:622415/1‑150 (MQ=255)

                                                                             cAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGc                                                                         >  2:3945240/1‑150 (MQ=255)

                                                                             cAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGc                                                                         >  1:5050579/1‑150 (MQ=255)

                                                                              agaaagaaATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGcc                                                                        >  1:3279781/1‑150 (MQ=255)

                                                                               gaaagaaaTCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCa                                                                                                                                                 >  1:623232/1‑76 (MQ=39)

                                                                                aaagaaaTCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGa                                                                      >  2:2455633/1‑150 (MQ=255)

                                                                                                  gCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTCGCCTGCTCg                                                    <  2:126349/150‑1 (MQ=255)

                                                                                                    aTCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTCGCCTGCTCGGt                                                  >  1:3142992/1‑150 (MQ=255)

                                                                                                    aTCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTCGCCTGCTCGGt                                                  <  2:4850860/150‑1 (MQ=255)

                                                                                                     tCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTCGCCTGCTCGGTg                                                 >  1:3071765/1‑150 (MQ=255)

                                                                                                     tCGGGGATCAGGTAAGAGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGATCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATTGGCCAAGCTCGAACGAAAGTCAGCGCCGAAAATCACTCGCCTGATCGGTg                                                 >  1:516656/1‑150 (MQ=38)

                                                                                                       ggggATCAGGTAAGCGCTTTGACTGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGACTGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTCGCCTGCTCGGTGAc                                               <  2:3192377/150‑1 (MQ=255)

                                                                                                        gggATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTCGCCTGCTCGGTGACg                                              >  2:1660622/1‑150 (MQ=255)

                                                                                                        gggATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTCGCCTGCTCGGTGACg                                              >  1:3906192/1‑150 (MQ=255)

                                                                                                         ggATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTCGCCTGCTCGGTGACGt                                             <  2:3875846/150‑1 (MQ=255)

                                                                                                            tCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGCCTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTCGCCTGCTCGGTGACGTCtt                                          <  2:2041038/150‑1 (MQ=255)

                                                                                                             cAGGTAAGAGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaatgccaggcctgttgcgcctgctggagcatgcccaggcccatggcgttcagcatgtgctcggcgttcagccgcggtgcgttggtcaccacgcacatgccgatgc                                         >  1:2498652‑M2/1‑40 (MQ=255)

                                                                                                                gTAATCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACAGACTTGGATGTAGCTAAAATTGAATGGGCCAAGCTCGACCGAAAGTAAGATCCGAAAATAACTCGCCTGCTCGGTGACGTCTTCAAt                                      >  1:2758289/1‑150 (MQ=255)

                                                                                                                gTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTCGCCTGCTCGGTGACGTCTTCAAt                                      >  1:2160395/1‑150 (MQ=255)

                                                                                                                 tAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaatgccaggcctgttgcgcctgctggagcatgcccaggcccatggcgttcagcatgtgctcggcgttcagccgcggtgcgttggtcaccacgcacatgccgatgccatg                                     >  1:1062090‑M2/1‑36 (MQ=255)

                                                                                                                    gcgcTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTCGCCTGCTCGGTGACGTCTTCAATCGGt                                  >  2:234710/1‑150 (MQ=255)

                                                                                                                       cTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTCGCCTGCTCGGTGACGTCTTCAATCGGTATg                               >  1:1421825/1‑150 (MQ=255)

                                                                                                                        tttGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTCGCCTGCTCGGTGACGTCTTCAATCGGTATGa                              <  1:4185762/150‑1 (MQ=255)

                                                                                                                        tttGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTCGCCTGCTCGGTGACGTCTTCAATCGGTATGa                              <  1:4185824/150‑1 (MQ=255)

                                                                                                                        tttGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTCGCCTGCTCGGTGACGTCTTCAATCGGTATGa                              <  2:2160395/150‑1 (MQ=255)

                                                                                                                              tgtgGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTCGCCTGCTCGGTGACGTCTTCAATCGGTATGAGCGTGa                        >  2:4106523/1‑150 (MQ=255)

                                                                                                                               gtgGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTCGCCTGCTCGGTGACGTCTTCAATCGGTATGAGCGTGAt                       <  2:127225/150‑1 (MQ=255)

                                                                                                                                tgGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTCGCCTGCTCGGTGACGTCTTCAATCGGTATGAGCGTGATg                      >  1:4309486/1‑150 (MQ=255)

                                                                                                                                    gTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTCGCCTGCTCGGTGACGTCTTCAATCGGTATGAGCGTGATGTCAt                  <  1:3009249/150‑1 (MQ=255)

                                                                                                                                          ggAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTCGCCTGCTCGGTGACGTCTTCAATCGGTATGAGCGTGATGTCATCCCTgg            >  2:4914199/1‑150 (MQ=255)

                                                                                                                                           gAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTCGCCTGCTCGGTGACGTCTTCAATCGGTATGAGCGTGATGTCATCCCTggg           >  1:1226624/1‑150 (MQ=255)

                                                                                                                                                cTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTCGCCTGCTCGGTGACGTCTTCAATCGGTATGAGCGTGATGTCATCCCTGGGAAAAt      >  1:2632457/1‑150 (MQ=255)

                                                                                                                                                    cAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTCGCCTGCTCGGTGACGTCTTCAATCGGTATGAGCGTGATGTCATCCCTGGGAAAATGCCa  <  2:392242/150‑1 (MQ=255)

TTCGAAAGTCGACGGGCTTGGGGTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTCGCCTGCTCGGTGACGTCTTCAATCGGTATGAGCGTGATGTCATCCCTGGGAAAATGCCA  >  NC_002947/4497521‑4497818

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.