BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3949906	48 (0.320)	15 (0.120)	8/220	NT	28.8%	coding (109/1797 nt)	PP_3483	type II secretion system protein
*	?	NC_002947	= 3949935	36 (0.300)	15 (0.120)	8/220	NT	28.8%	coding (80/1797 nt)	PP_3483	type II secretion system protein

Only 100 of 111 total aligned reads displayed.

GCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAGGCTGGCTCGGCCAGGGGTGCGGGCGCCGCTATTCCCCT  >  NC_002947/3949787‑3950084

gCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACCTCACAGGTCTGTGGGCTGCATACATc                                                                                                                                                      <  2:285543‑M2/150‑2 (MQ=255)

cgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATc                                                                                                                                                      >  1:4150693‑M1/93‑150 (MQ=255)

  gTTCCAGGCAGTCGAGCAGGTGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGTATACATcct                                                                                                                                                    >  2:2647201‑M2/1‑147 (MQ=255)

   ttCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCGCCCACAGGTCCATCACCGGGGGGTGGGGTGCATGCATccgg                                                                                                                                                   <  1:3049511‑M2/150‑5 (MQ=255)

    tCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgt                                                                                                                                                  >  2:286132‑M2/1‑145 (MQ=255)

    tCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgt                                                                                                                                                  >  1:3837925‑M2/1‑145 (MQ=255)

    tCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgt                                                                                                                                                  >  2:4593609‑M2/1‑145 (MQ=255)

    tCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgt                                                                                                                                                  >  2:2095292‑M2/1‑145 (MQ=255)

    tCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgt                                                                                                                                                  >  1:4892326‑M2/1‑145 (MQ=255)

     ccAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtg                                                                                                                                                 >  1:2779307‑M2/1‑144 (MQ=255)

     ccAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtg                                                                                                                                                 >  1:2779013‑M2/1‑144 (MQ=255)

     cagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCtgtg                                                                                                                                                 >  2:4035790‑M1/88‑150 (MQ=255)

     cagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCtgtg                                                                                                                                                 >  1:675517‑M1/88‑150 (MQ=255)

      cAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACCGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgg                                                                                                                                                <  2:4719455‑M2/150‑8 (MQ=255)

      cAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgg                                                                                                                                                >  1:3693241‑M2/1‑143 (MQ=255)

      cAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgggg                                                                                                                                                <  2:2209016‑M2/150‑8 (MQ=255)

      agcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTgg                                                                                                                                                >  2:2577055‑M1/87‑150 (MQ=255)

        ggCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCGCCCCCAGGGGCATCACAGGTCGGTGGGCGGCATACATccggtggga                                                                                                                                              <  1:4698781‑M2/150‑10 (MQ=255)

        cctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGa                                                                                                                                              >  1:4647036‑M1/85‑150 (MQ=255)

         gCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggag                                                                                                                                             <  2:1419796‑M2/150‑11 (MQ=255)

          tgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGc                                                                                                                                            >  2:3937506‑M1/83‑150 (MQ=255)

           aGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTGTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACCGGTACAGCACAGGTCGGTGGGCTGCATACAAcctgtgggagcg                                                                                                                                           <  2:1379749‑M2/150‑13 (MQ=255)

            cgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCgg                                                                                                                                          >  1:1061500‑M1/81‑150 (MQ=255)

             tCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcggg                                                                                                                                         >  1:2225284‑M2/1‑136 (MQ=255)

              cGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggc                                                                                                                                        >  1:2440866‑M2/1‑135 (MQ=255)

                gcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCAt                                                                                                                                      >  2:2438198‑M1/77‑150 (MQ=255)

                aGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcat                                                                                                                                      >  1:3316323‑M2/1‑133 (MQ=255)

                       gcTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgggggagcgggcatgcccgcg                                                                                                                               <  2:1848207‑M2/150‑25 (MQ=255)

                           gTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCGCCCACAGGGACATCACAGGTCGGTGGGCTGCATACAGccggtgggagcgggccggcccgcgaagc                                                                                                                           <  1:346340‑M2/150‑29 (MQ=255)

                                  gCTTGCAGCGGGGCCTGGGCCAGGCGGTCGGGGGGGTCGGGGTAAATTTTTGGGGGTTTCTGCGCGGGCCTGCCCGCTCCCACCGGTACACCACAGGTCTGTGGGCTGCATACATCGTGTGGGAGCGGGCTTGCCCGCGAAGACGTCGGt                                                                                                                    <  2:1523008/150‑1 (MQ=255)

                                        aGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACCGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGc                                                                                                              >  2:432803/1‑150 (MQ=255)

                                           ggggcctgggcctGGTGGCGGGGGGGGTTGGCGGAATTTTTGGCTGGGTTCTTGGGGGGCATGCCGGCTCCAACTGGTACTTCAGCGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCttt                                                                                                           <  2:1733965/149‑1 (MQ=255)

                                             ggCGTGGGCCGGGTGGTCGCGGGGGTCGGCGTAATTTTTGGCTGGTTGCGGCGGGGGCTGGCCCGCGCCCCCCGGTACAGCCCCGGTCGGGGGGCTGAACCCATCCGGGGGGCGGGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGc                                                                                                         <  2:3839386/150‑1 (MQ=255)

                                             ggCCGGGGCCCGGTGGGGGGGGGGGTAGGCGTAAATTTTGGCGGGGTGGTCCGCGGGACGGCCCGCTCCCACTGGTACATCACCGGTCGGTGGGCTGAATACATCCGGGGGGTGGGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGc                                                                                                         <  2:3839369/150‑1 (MQ=255)

                                              gCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACCGGTACCTCACAGGTCTGTGGGCTGCATACATCCGGTGGGAGCGGGCCTGCCCGCGAAGACGTCGGTGCAGGCTTTGCa                                                                                                        >  2:4002893/1‑150 (MQ=255)

                                                     cctggaggTGGGGGGGGTTGGCGTAATTTTGTGCTGGGTTATGCGGGGGCCGCCCCGCCCCCACCGTTACACCACCGGCCTGTGGGCTGAATACATCCTGTGGGCGGGGGATTGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCg                                                                                                 <  2:1717786/147‑1 (MQ=255)

                                                         gaggTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACCGGTACATCACAGGTCTGTGGGCTGCCTACATCCTGTGGGAGCGGGCATGCCCCCGACGACGTCGGTGCAGGCTTTGCAGATTCCGGGGt                                                                                             >  2:3414825/1‑150 (MQ=255)

                                                         gaggTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCGGTGGGCTGCATACATCCGGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCGGTGCCGATTCCGGGGt                                                                                             >  2:2866455/1‑150 (MQ=39)

                                                          cggTCGCGGGGGTAGGCGTAAATTTTTGGTGGGTTCGTCGCGGGCAGGCCCGCTCCCACTGGTACATCCCCGGGCTGTGGGCTGCATACATCCTGGGGGCGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGtt                                                                                            <  2:3097295/149‑1 (MQ=255)

                                                                         gggtaattttttGCTGGGTTCTTCGGGTGCTTGCCCGCTCCCACGGGTACATCACCGGTCTGTGGGCTGCTTACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCt                                                                             <  2:4798054/143‑1 (MQ=255)

                                                                          cGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATAAATCCGGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCCGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTg                                                                            >  2:2124195/1‑150 (MQ=255)

                                                                               aTTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACCGGTACATCACAGGTCTGTGGGCTGCATACATCCGGTGGGAGCGGGCCTGCCCGCGCAGACGTCGGTGCGGGCGTTGCAGATTGCGGGGGTGCATCGAATGCGTGTGGCATg                                                                       >  1:4074127/1‑150 (MQ=255)

                                                                                         ggTTCTTCGCGGGCATGCCCGCTCCCACCGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCGTTGCAGCTTACGGGGGTGCATCGACTGCTTCTGGCATGGCCTGCGAcg                                                             >  2:2296157/1‑149 (MQ=39)

                                                                                         ggTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCCCAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACt                                                             >  2:4233973/1‑150 (MQ=255)

                                                                                         ggTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCCGAGTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACt                                                             >  2:4233900/1‑150 (MQ=255)

                                                                                              TTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGCCGACGTCGGTGCAGGCGTTGCAGATTCCGGGGTTGCATCGACTGCGTCTTGCATGGCCTGCGCCTCCgcg                                                        <  2:1558974‑M1/150‑2 (MQ=255)

                                                                                                   gggccggCCCGCGCCCCCCGGTCCAGCCCCGGTGTGTGGGCTGCATCCCTCCTGGGGGCGGGGGCAGGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAggg                                                   <  1:3727346/144‑1 (MQ=255)

                                                                                                     gcttGCCCGCTCCCACAGGTACATCACCGGTCTGTGGGCTGCTTACATCCTGTGGGCGGGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGgc                                                 <  2:849909/147‑1 (MQ=255)

                                                                                                     gccgGCCCGCGCCCACCGGTACATCCCCGGGCTGGGGGCGGCATACACCCGGTGGGCGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGgc                                                 >  2:849916‑M1/5‑150 (MQ=255)

                                                                                                     gCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgcccgcgaagaacccagcacaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctg                                                 <  1:3635103‑M2/150‑103 (MQ=255)

                                                                                                     gCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctg                                                 <  1:4403254‑M2/150‑103 (MQ=255)

                                                                                                     gCATGCCCGCTCCCACAGGTACATCACAGGTCTGAGGGCTGCATACATacggtgggagcgggcatgcccgcgacgaaccccgcacaaatttccccctacccccgcgaccaccaggcccaggcccctctgcaagccacagaccagcgcctg                                                 <  1:4403382‑M2/150‑103 (MQ=255)

                                                                                                       aTGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgct                                               <  1:2523782‑M2/150‑105 (MQ=255)

                                                                                                       aTGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgct                                               <  1:2523852‑M2/150‑105 (MQ=255)

                                                                                                       aTGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgct                                               <  1:2523818‑M2/150‑105 (MQ=255)

                                                                                                       aTGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgct                                               <  1:5095849‑M2/150‑105 (MQ=255)

                                                                                                       aTGCCCGCTCCCACAGGTACATCACAGGTATGTGGGCTGCATACATcctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctccaggcccaggcccgtctgcaagccactgacgagcgcctgct                                               <  2:4309101‑M2/150‑105 (MQ=255)

                                                                                                       ATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGgcgc                                               <  1:4090957‑M1/150‑1 (MQ=255)

                                                                                                         GCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGt                                             <  1:4182118‑M1/150‑1 (MQ=255)

                                                                                                          CCCGCGCCCACCGGTCCAGCCCAGGTCTGGGGGCTGCATACAGCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTc                                            >  2:5051081‑M1/1‑150 (MQ=255)

                                                                                                           ccGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgac                                           <  1:3361677‑M2/150‑109 (MQ=255)

                                                                                                           CCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCg                                           <  1:2581037‑M1/150‑1 (MQ=255)

                                                                                                           CCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCg                                           <  2:592792‑M1/150‑1 (MQ=255)

                                                                                                           CCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCg                                           <  2:1335186‑M1/150‑1 (MQ=255)

                                                                                                             GCTCCCACTGGTACCTCACTGGTCTGTGGGCTGAATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCa                                         >  2:3689883‑M1/1‑150 (MQ=255)

                                                                                                             GCTCCCACTGGTACATCACTGGTCTGTGGGCTGATTACATCCTGTGGGTGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCa                                         >  2:3689960‑M1/1‑150 (MQ=255)

                                                                                                             GCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCa                                         <  1:3265606‑M1/150‑1 (MQ=255)

                                                                                                              CTCCCACTGGTACATCACTGGTATGTGGTCTGCATACCTCCTTTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAg                                        >  2:2890995‑M1/1‑150 (MQ=255)

                                                                                                              CTCCCACAGGTACATCACTGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAg                                        >  2:774515‑M1/1‑150 (MQ=255)

                                                                                                                 ccACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgactgcctg                                     <  1:2408460‑M2/150‑115 (MQ=255)

                                                                                                                 ccACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgactgcctg                                     <  1:4979020‑M2/150‑115 (MQ=255)

                                                                                                                 CCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAggct                                     <  1:4061101‑M1/150‑1 (MQ=255)

                                                                                                                 CCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAggct                                     <  1:2832525‑M1/150‑1 (MQ=255)

                                                                                                                 CCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAggct                                     <  1:2832586‑M1/150‑1 (MQ=255)

                                                                                                                   acaGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgactgcctgga                                   <  2:4105532‑M2/150‑117 (MQ=255)

                                                                                                                   ACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAggctgg                                   <  2:3719260‑M1/150‑1 (MQ=255)

                                                                                                                   ACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAggctgg                                   <  1:586791‑M1/150‑1 (MQ=255)

                                                                                                                   ACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAggctgg                                   <  2:5064104‑M1/150‑1 (MQ=255)

                                                                                                                     AGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAggctggct                                 <  1:1532679‑M1/150‑1 (MQ=255)

                                                                                                                      GGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAGGCTGGCTc                                <  1:2020543‑M1/150‑1 (MQ=255)

                                                                                                                       gTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgactgcctggaacgc                               <  1:3382950‑M2/150‑121 (MQ=255)

                                                                                                                       GTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAGGCTGGCTCg                               <  1:4324870‑M1/150‑1 (MQ=255)

                                                                                                                            tCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAGGCTGGCTCGGCCAg                          >  2:2207858/1‑150 (MQ=255)

                                                                                                                             cccaGGTCGGTGGGCTGCATACATCGTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAGGCTGGCTCGGCCAgg                         <  2:1966813/148‑1 (MQ=255)

                                                                                                                             cacaGGTCGGGGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAGGCTGGCTCGGCCAgg                         <  2:1966914/150‑1 (MQ=255)

                                                                                                                              acaGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAGGCTGGCTCGGCCAggg                        >  1:1746880/1‑150 (MQ=255)

                                                                                                                              acaGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAGGCTGGCTCGGCCAggg                        >  1:1447389/1‑150 (MQ=255)

                                                                                                                              acaGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAGGCTGGCTCGGCCAggg                        >  2:1623284/1‑150 (MQ=255)

                                                                                                                                cggTCTGTGGGCTGCATACCTCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAGGCTGGCTCGGCCAGGGGt                      <  1:285543/149‑1 (MQ=255)

                                                                                                                                aGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAGGCTGGCTCGGCCAGGGGt                      >  2:3567437/1‑150 (MQ=255)

                                                                                                                                     tgtgGGCTGCATACATcctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaa                                                                   >  1:2290703‑M2/1‑16 (MQ=255)

                                                                                                                                     tgtgGGCTGCATACATcctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaa                                                                   <  2:2290703‑M2/100‑85 (MQ=255)

                                                                                                                                         ggCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAGGCTGGCTCGGCCAGGGGTGCGGGcgcc             >  2:3275096/1‑150 (MQ=255)

                                                                                                                                               aTACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAGGCTGGCTCGGCCAGGGGTGCGGGCGCCGCTAtt       >  2:2029685/1‑150 (MQ=255)

                                                                                                                                                tACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAGGCTGGCTCGGCCAGGGGTGCGGGCGCCGCTATTc      >  1:4997965/1‑150 (MQ=255)

                                                                                                                                                   aTCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAGGCTGGCTCGGCCAGGGGTGCGGGCGCCGCTATTcccc   >  1:2060378/1‑150 (MQ=255)

                                                                                                                                                   aTCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAGGCTGGCTCGGCCAGGGGTGCGGGCGCCGCTATTcccc   >  2:5017480/1‑150 (MQ=255)

                                                                                                                                                   aTCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAGGCTGGCTCGGCCAGGGGTGCGGGCGCCGCTATTcccc   >  2:2378725/1‑150 (MQ=255)

                                                                                                                                                    tCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAGGCTGGCTCGGCCAGGGGTGCGGGCGCCGCTATTCCCCt  >  2:4358371/1‑150 (MQ=255)

                                                                                                                                                    tCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAGGCTGGCTCGGCCAGGGGTGCGGGCGCCGCTATTCCCCt  >  1:5055286/1‑150 (MQ=255)

GCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAGGCTGGCTCGGCCAGGGGTGCGGGCGCCGCTATTCCCCT  >  NC_002947/3949787‑3950084

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.