New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4854420	22 (0.140)	9 (0.080)	9/194	NT	23.0%	intergenic (‑124/+173)	recR/ybaB	recombination protein RecR/nucleoid‑associated broad specificity regulator
	?	NC_002947	= 4854479	45 (0.420)					intergenic (‑183/+114)	recR/ybaB	recombination protein RecR/nucleoid‑associated broad specificity regulator

ACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGC‑AAAAAAAACCGCCACTGTTGTCAGCGGCGGTTTTGAGTATCGCAATGCCCTTAGAACGGCATCTTGAAGCCCGGCGGC  >  NC_002947/4854333‑4854620                                                                                                                                                   |                                                                                                                                               cccctggggggggggTGGGGTAAAATCACCTCGCCCAACGCCTGCATGTTGTGCTTTTTTGTGGGAGCGGCTTTGTGTCGCGAATGGGCTGCGACCCACCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGcccc                                                                                                                                             <  2:3990416/143‑1 (MQ=255) cccccGCGGGGGGGGGGGCGAAAAACCCCCGCGCCCACCGCCTGCATGGTCTGCTTTTTGGGGGGCGGGGCGTTGGGGCGCGACGGGGGTGCTAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGcccc                                                                                                                                             <  2:3990117/149‑1 (MQ=255) aCCCCGCGGGGGGGGTGGCGAAAAAAAACCCCCCCCAACCCCTGAACGGTCTGATTTTTTGTGGGTGGGGCCTTGTGTCGCTAACGGGCTGGTACGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGcccc                                                                                                                                             <  2:1905084/150‑1 (MQ=255)   cccggggggggggTGGCGTAAAACCACCCCCCCCAACCCCTCCATGGCGTGGTTTTTGGGGGGCGCGGCGTGGTGTCGCTAAGGGGCGGCCAAGCCGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCtt                                                                                                                                           <  2:882073/145‑1 (MQ=255)      gcgggggcggggGCGTCAAATCCCCTCGCCCACCGCCGGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCccctttcg                                                                                                                                        >  2:3800023‑M2/1‑142 (MQ=255)                                                                   gCGGCCTTGTGTCGCGAAAGGGCAGCGAAGCAGCCCCCGCACTCTGTTCTGCGAAGCGGTAATCCCGGGGCCGCTTCGCGCCCCGTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCCACAGGGGGGAAATATCCGC‑aaaaaa                                                                          >  2:2886383/1‑150 (MQ=25)                                                                         ttGTGTCGCGAAAGGGCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGC‑AAAAAAAAcccc                                                                    >  1:3927009/1‑148 (MQ=255)                                                                         ttGTGTCGCGAAAGGGCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGC‑AAAAAAAACCGc                                                                    >  2:4241226/1‑150 (MQ=255)                                                                              tCGCGAAAGGGCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGC‑AAAAAAAACCGCCACtg                                                               >  1:886860/1‑150 (MQ=255)                                                                              tCGCGAAAGGGCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGC‑AAAAAAAACCGCCACtg                                                               >  1:3637009/1‑150 (MQ=255)                                                                                gcgAAAGGGCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCccctttcgcgacacaaggccgctcccacaaaaaagcagaccttgcaggctttgggcgaggtgatttgacgccaccgcccccg                                                              <  1:1271592‑M2/150‑83 (MQ=255)                                                                                gcgAAAGGGCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGC‑AAAAAAAACCGCCACtgtt                                                             >  1:4581941/1‑150 (MQ=255)                                                                                gcgAAAGGGCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGC‑AAAAAAAACCGCCACtgtt                                                             >  1:4581855/1‑150 (MQ=255)                                                                                 cgAAAGGGCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCccctttcgcgacacaaggccgctcccacaaaaaagcagaccttgcaggctttgggcgaggtgatttgacgccaccgcccccgc                                                             <  1:2588013‑M2/150‑84 (MQ=255)                                                                                  gAAAGGGCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCccctttcgcgacacaaggccgctcccacaaaaaagcagaccttgcaggcgttgggcgaggtgatttgacgccaccgcccccgct                                                            <  1:663344‑M2/150‑85 (MQ=255)                                                                                  gAAAGGGCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGC‑AAAAAAAACCGCCACtgttgt                                                           >  1:2654816/1‑150 (MQ=255)                                                                                   aaaGGGCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGC‑AAAAAAAACCGCCACTGTTGTc                                                          >  1:1986145/1‑150 (MQ=255)                                                                                     aGGGCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCccctttcgcgacacaaggccgctcccacaaaaaagcagaccttgcaggctttgggcgaggtgatttgacgccaccgcccccgctggg                                                         <  1:4213232‑M2/150‑88 (MQ=255)                                                                                     aGGGCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGCAAAAAAAAACCGCCCCGGTTGTCa                                                         >  1:679712/1‑150 (MQ=255)                                                                                     aGGGCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGCAAAAAAAAACCGCCACTGTTGTCa                                                         >  1:679856/1‑150 (MQ=255)                                                                                      gggCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGCAAAAAAAAACCGCCACTGTTGTCAg                                                        >  2:272720/1‑150 (MQ=255)                                                                                        gCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCccctttcgcgacacaaggccgctcccacaaaaaagcagaccttgcaggctttgggcgaggtgatttgacgccaccgcccccgctgggtat                                                      <  2:1253447‑M2/150‑91 (MQ=255)                                                                                          tGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGC‑AAAAAAAACCGCCACTGTTGTCAgcggcg                                                   >  2:3170779/1‑150 (MQ=255)                                                                                          tGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGC‑AAAAAAAACCGCCACTGTTGTCAgcggcg                                                   >  1:2878195/1‑150 (MQ=255)                                                                                           gCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGC‑AAAAAAAACCGCCACTGTTGTCAGcggcgg                                                  >  1:3752452/1‑150 (MQ=255)                                                                                             gAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCccctttcgcgacacaaggccgctcccacaaaaaagcagaccttgcaggctttgggcgaggtgatttgacgccaccgcccccgctgggtataaacc                                                 <  1:3745419‑M2/150‑96 (MQ=255)                                                                                             gAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGC‑AAAAAAAACCGCCACTGTTGTCAGCGGCGGtt                                                >  1:3640387/1‑150 (MQ=255)                                                                                                       cGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGC‑AAAAAAAACCGCCACTGTTGTCAGCGGCGGGTTTGAGTATCg                                      >  2:3160361/1‑150 (MQ=255)                                                                                                        ggCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGC‑AAAAAAAACCGCCACTGTTGTCAGCGGCGGTTTTGAGTATCGc                                     >  2:3880167/1‑150 (MQ=255)                                                                                                           aCTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCccctttcgcgacacaaggccgctcccacaaaaaagcagaccttgcaggctttgggcgaggtgatttgacgccaccgcccccgctgggtataaaccgcctcttattgaat                                   <  2:2924415‑M2/150‑110 (MQ=255)                                                                                                            ctctGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGC‑AAAAAAAACCGCCACTGTTGTCAGCGGCGGTTTTGAGTATCGCAATg                                 >  1:330285/1‑150 (MQ=255)                                                                                                             tctGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGC‑AAAAAAAACCGCCACTGTTGTCAGCGGCGGTTTTGAGTATCGCAATGc                                >  1:96027/1‑150 (MQ=255)                                                                                                                gtgCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGC‑AAAAAAAACCGCCACTGTTGTCAGCGGCGGTTTTGAGTATCGCAATGCCCt                             >  2:1936771/1‑150 (MQ=255)                                                                                                                 tgctgcGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGC‑AAAAAAAACCGCCACTGTTGTCAGCGGCGGTTTTGAGTATCGCAATGCCCtt                            >  2:1184605/1‑150 (MQ=255)                                                                                                                 tgctgcGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGC‑AAAAAAAACCGCCACGGTTTTAAGCGGCGGGTTTGTGTATCGCaaatgccgt                            >  1:1327311/1‑143 (MQ=37)                                                                                                                    tgcGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGC‑AAAAAAAACCGCCACTGTTGTCAGCGGCGGTTTTGAGTATCGCAATGCCCTTAGa                         >  1:4601652/1‑150 (MQ=255)                                                                                                                    tgcGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGC‑AAAAAAAACCGCCACTGTTGTCAGCGGCGGTTTTGAGTATCGCAATGCCCTTAGa                         >  2:2776118/1‑150 (MQ=255)                                                                                                                     gcGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGC‑AAAAAAAACCGCCACTGTTGTCAGCGGCGGTTTTGAGTATCGCAATGCCCTTAGaa                        >  1:4679289/1‑150 (MQ=255)                                                                                                                       gAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGC‑AAAAAAAACCGCCACTGTTGTCAGCGGCGGTTTTGTGTATCGCAATGCCCTTAGAACg                      >  1:3424547/1‑150 (MQ=255)                                                                                                                       gAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGC‑AAAAAAAACCGCCACTGTTGTCAGCGGCGGTTTTGAGTATCGCAATGCCCTTAGAACg                      >  1:3424573/1‑150 (MQ=255)                                                                                                                          gcagAAATCCCGGGGCCGCTTAGCTCACCTTTAGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCTGC‑AAAAAAAACAGACAATGTTGTCAGCGGCGGTTTTGAGTATCGCAATGCCCTTAGAACGGCa                   >  2:17031/4‑150 (MQ=38)                                                                                                                          gCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGC‑AAAAAAAACCGCCACTGTTGTCAGCGGCGGTTTTGAGTATCGCAATGCCCTTAGAACGGCa                   >  1:602031/1‑150 (MQ=255)                                                                                                                            tGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGC‑AAAAAAAACCGCCACTGTTGTCAGCGGCGGTTTTGAGTATCGCAATGCCCTTAGACCGGCATc                 >  2:14392/1‑150 (MQ=255)                                                                                                                            tGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGC‑AAAAAAAACCGCCACTGTTGTCAGCGGCGGTTTTGAGTATCGCAATGCCCTTAGAACGGCATc                 >  1:2530379/1‑150 (MQ=255)                                                                                                                             gAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGC‑AAAAAAAACCGCCACtgttgt                                                           <  1:2718183/107‑1 (MQ=255)                                                                                                                             gAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGC‑AAAAAAAACCGCCACtgttgt                                                           >  2:2718183/1‑107 (MQ=255)                                                                                                                              aaaTCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACCAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGC‑AAAAAAAACCGCCACTGTTGTCAGCGGCGGTTTTGAGTATCGCAATGCCCTTAGAACGGCATCtt               >  2:504065/1‑150 (MQ=255)                                                                                                                                aTCCCGGGGCCGCTTCGCGCccctttcgcgacacaaggccgctcccacaaaaaagcagaccttgcaggctttgggcgaggtgatttgacgccaccgcccccgctgggtataaaccgcctcttattgaattgtcaggcctttcccatgagc              <  1:4896063‑M2/150‑131 (MQ=255)                                                                                                                                aTCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGC‑AAAAAAAACCGCCACTGTTGTCAGCGGCGGTTTTGAGTATCGCAATGCCCTTAGAACGGCATCTTGa             >  2:2447463/1‑150 (MQ=255)                                                                                                                                aTCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGC‑AAAAAAAACCGCCACTGTTGTCAGCGGCGGTTTTGAGTATCGCAATGCCCTTAGAACGGCATCTTGa             >  2:239004/1‑150 (MQ=255)                                                                                                                                 tCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGC‑AAAAAAAACCGCCACTGTTGTCAGCGGCGGTTTTGAGTATCGCAATGCCCTTAGAACGGCATCTTGaa            >  2:2362932/1‑150 (MQ=255)                                                                                                                                 tCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGC‑AAAAAAAACCGCCACTGTTGTCAGCGGCGGTTTTGAGTATCGCAATGCCCTTAGAACGGCATCTTGaa            <  1:150963/150‑1 (MQ=255)                                                                                                                                 tCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGC‑AAAAAAAACCGCCACTGTTGTCAGCGGCGGTTTTGAGTATCGCAATGCCCTTAGAACGGCATCTTGaa            >  2:4309685/1‑150 (MQ=255)                                                                                                                                    cGGGGCCGCTTCGCGCccctttcgcgacacaaggccgctcccacaaaaaagcagaccttgcaggctttgggcgaggtgatttgacgccaccgcccccgctgggtataaaccgcctcttattgaattgtcaggcctttcccatgagcttca          >  2:4896063‑M2/1‑16 (MQ=255)                                                                                                                                         ccGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGC‑AAAAAAAACCGCCACTGTTGTCAGCGGCGGTTTTGAGTATCGCAATGCCCTTAGAACGGCATCTTGAAGCCcggcg    >  2:2241659/1‑150 (MQ=255)                                                                                                                                         ccGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGC‑AAAAAAAACCGCCACTGTTGTCAGCGGCGGTTTTGAGTATCGCAATGCCCTTAGAACGGCATCTTGAAGCCcggcg    <  1:1936771/150‑1 (MQ=255)                                                                                                                                          cGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGC‑AAAAAAAACCGCCACTGTTGTCAGCGGCGGTTTTGAGTATCGCAATGCCCTTAGAACGGCATCTTGAAGCCcggcgg   >  2:4465918/1‑150 (MQ=255)                                                                                                                                           gCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGC‑AAAAAAAACCGCCACTGTTGTCAGCGGCGGTTTTGAGTATCGCAATGCCCTTAGAACGGCATCTTGAAGCCCggcggc  >  2:5018954/1‑150 (MQ=255)                                                                                                                                           gCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGC‑AAAAAAAACCGCCACTGTTGTCAGCGGCGGTTTTGAGTATCGCAATGCCCTTAGAACGGCATCTTGAAGCCCggcggc  >  1:3254288/1‑150 (MQ=255)                                                                                                                                                   |                                                                                                                                               ACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGC‑AAAAAAAACCGCCACTGTTGTCAGCGGCGGTTTTGAGTATCGCAATGCCCTTAGAACGGCATCTTGAAGCCCGGCGGC  >  NC_002947/4854333‑4854620

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.