BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5335165 =	119 (0.780)	15 (0.110)	9/246	NT	13.9%	intergenic (+27/‑216)	gluQ/PP_5704	glutamyl‑Q tRNA(Asp) synthetase/hypothetical protein
*	?	NC_002947	5335225 =	80 (0.590)	15 (0.110)	9/246	NT	13.9%	intergenic (+87/‑156)	gluQ/PP_5704	glutamyl‑Q tRNA(Asp) synthetase/hypothetical protein

Only 100 of 145 total aligned reads displayed.

CGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCAAGCCCGTAGCGCCCAACCATCGA  >  NC_002947/5335077‑5335373

cgcAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCGGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCAGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCAt                                                                                                                                                      <  2:793230/150‑1 (MQ=255)

 gcAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATg                                                                                                                                                     <  1:4002453/150‑1 (MQ=255)

 gcAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCATCAAGGCCGGTGGGCTACCTGTGGGCGCGGGCCTg                                                                                                                                                     >  1:3570982/1‑150 (MQ=255)

   aaTGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGcc                                                                                                                                                   >  2:4117502/1‑150 (MQ=255)

    ctGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGccc                                                                                                                                                  <  2:3846112/149‑1 (MQ=255)

    aTGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCGTCGCGGGCGCGCCCGCTCCCCCAGGAACCACGCCGCCTTCTAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGccc                                                                                                                                                  <  2:3845692/150‑1 (MQ=255)

         ggcCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTTATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCCCGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGaa                                                                                                                                             <  1:3605521/150‑1 (MQ=255)

            cGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTGTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACCGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCGGTGGGAGCGGGCATGCCCGCGAAAgg                                                                                                                                          <  2:1583815/150‑1 (MQ=255)

             ggAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAggg                                                                                                                                         >  2:162799/1‑150 (MQ=255)

             ggAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCCCTCCCACCGGAACCACGCCGCCTTAAAGGCCTGTGGGCTACCGGTGGGAGCGGGCAAGCCCGCGAAAggg                                                                                                                                         >  2:162896/1‑150 (MQ=39)

              gAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGc                                                                                                                                        <  2:1222312/150‑1 (MQ=255)

                aGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCCTGCCCGCGAAAGGGCCg                                                                                                                                      >  1:3397334/1‑150 (MQ=255)

                aGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTGCCCGGCCTCGTCGCGGGCGCGCCCGCTCCCACCGGAACCCCGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCg                                                                                                                                      <  2:2969620/150‑1 (MQ=38)

                 gCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCgg                                                                                                                                     <  1:1165236/150‑1 (MQ=255)

                    aTCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGGGGGAGCGGGCATGCCCGCGAAAGGGCCGGcac                                                                                                                                  >  2:1756346/1‑150 (MQ=255)

                     tCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGcaca                                                                                                                                 >  2:2264294/1‑150 (MQ=255)

                     tCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCCCCGTCAAGGCCTGTGGGCTACCGGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGcaca                                                                                                                                 >  1:1559593/1‑150 (MQ=255)

                      cgcgCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTGACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAg                                                                                                                                <  2:354052/150‑1 (MQ=255)

                       gcgcAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACCGGAACCCCGCCGCCGGCCAGGCCGGGGGGCTCCCGGTGGGCGCGGGCCTGCCCGCGCAAGGGCCGGCACCgg                                                                                                                               >  2:1962958/1‑150 (MQ=255)

                               gACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTAcccccc                                                                                                                       <  2:3496342/150‑1 (MQ=255)

                                aCCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCGGGGGGAGCGGGCCTGCCCGCGAAAGGGCCGGCCCAGGTAccccccc                                                                                                                      >  2:1909048/1‑150 (MQ=255)

                                     ggTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑Taaaa                                                                                                                <  1:1174687/150‑1 (MQ=255)

                                     ggTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑Taaaa                                                                                                                >  2:3790676/1‑150 (MQ=255)

                                           agagGTTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACaaaa                                                                                                          <  1:2790527/150‑1 (MQ=255)

                                           agagGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGGGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCGTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACaaaa                                                                                                          <  1:1909048/150‑1 (MQ=255)

                                           agagGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACaaaa                                                                                                          <  1:4867324/150‑1 (MQ=255)

                                           agagGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACaaaa                                                                                                          <  1:4595300/150‑1 (MQ=255)

                                                 tGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAg                                                                                                    >  2:4453095/1‑150 (MQ=255)

                                                         gcTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTAACCCCCC‑TAAAAACAAAATCCCAGTAAATTCa                                                                                            >  2:4627500/1‑150 (MQ=255)

                                                         gcTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCGTCCAGGCCTGTGGGCTACCGGTGGGGGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑GAAAAACAAAAGCCCCGTAAAATCa                                                                                            >  2:59020/1‑150 (MQ=37)

                                                          cTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCaa                                                                                           <  1:4272749/150‑1 (MQ=255)

                                                            gAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACCCCGCCGTCAAGGCCTGTGGGCTACCGGTGGGAGCGGGCATGCCCCCCGAAGGGCCGGCCCAGGGACCCCCCC‑GAAAAAAAAAAGCCCAGTAAATTCAAAc                                                                                         >  1:4957527/1‑150 (MQ=38)

                                                                 tttACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTg                                                                                    <  1:3288071/150‑1 (MQ=255)

                                                                 attACCCGCCTCTTCGCGGGCGCGCCCGCTCCCACAGCAACCACGCCGCCTTCAAGGCCAGTGCGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGCCCGGCACAGGTACCCCCCC‑TAAAAACAAAACCCCAGTAAATTCAAACCCTTg                                                                                    <  2:687216/149‑1 (MQ=38)

                                                                  ttACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTgg                                                                                   <  1:2684454/150‑1 (MQ=255)

                                                                   tACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGc                                                                                  <  2:2078724/150‑1 (MQ=255)

                                                                        gCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCCGTACATTCAAACCCGGGGCGAACg                                                                             >  2:3889304/1‑150 (MQ=255)

                                                                           tctTCGCGGGCGCGCCCGCTCCCACCGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑GAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCtg                                                                          >  2:1295978/1‑150 (MQ=255)

                                                                             gtCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCtgtg                                                                        <  2:4149361/149‑1 (MQ=255)

                                                                                gcgGGCGCGCCCGCTCCCACAGGAACCACGCCGCCGTCAAGGCCGGTGGGCTACCGGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACATAATCCCAGTAAATTCCAACCCTTGGCGAACGCGGTGGAt                                                                     >  2:2310177/1‑150 (MQ=38)

                                                                                      gcgcCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGc                                                               >  1:3694077/1‑150 (MQ=255)

                                                                                        GCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTa                                                             >  2:795281‑M1/1‑150 (MQ=255)

                                                                                        GCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTa                                                             >  1:1261468‑M1/1‑150 (MQ=255)

                                                                                        GCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTa                                                             >  1:5020579‑M1/1‑150 (MQ=255)

                                                                                         CCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGGGGGCGACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTa                                                             >  2:1853471‑M1/1‑150 (MQ=255)

                                                                                          ccgctcccacaggtagcccacaggccttgaaggcggcgtggttcctgtgggagcgggcGCGCCCGCGAAGGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGc                                                           >  1:1119646‑M2/59‑150 (MQ=255)

                                                                                             CTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATc                                                        >  1:887793‑M1/1‑150 (MQ=255)

                                                                                              tcccacaggtagcccacaggccttgaaggcggcgtggttcctgtgggagcgggcATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATcc                                                       >  2:4856784‑M2/55‑150 (MQ=255)

                                                                                              TCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATcc                                                       <  2:2029490‑M1/150‑1 (MQ=255)

                                                                                                ccacaggtagcccacaggccttgaaggcggcgtggttcctgtgggagcgggcATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATcccc                                                     >  1:2414395‑M2/53‑150 (MQ=255)

                                                                                                CCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATcccc                                                     <  1:2197231‑M1/150‑1 (MQ=255)

                                                                                                 cacaggtagcccacaggccttgaaggcggcgtggttcctgtgggagcgggcATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCCTccccc                                                    >  2:1414700‑M2/52‑150 (MQ=255)

                                                                                                 cacaggtagcccacaggccttgaaggcggcgtggttcctgtgggagcgggcATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATccccc                                                    >  1:4040926‑M2/52‑150 (MQ=255)

                                                                                                 cacaggtagcccacaggccttgaaggcggcgtggttcctgtgggagcgggcATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATccccc                                                    >  1:3485208‑M2/52‑150 (MQ=255)

                                                                                                 CACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TACAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATccccc                                                    >  2:3373492‑M1/1‑150 (MQ=255)

                                                                                                 CACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGCACGCTGTGGATTCCCGCTAGCATccccc                                                    <  1:4124123‑M1/150‑1 (MQ=255)

                                                                                                  ACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATcccccc                                                   <  2:2802111‑M1/150‑1 (MQ=255)

                                                                                                  ACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATcccccc                                                   <  1:3956988‑M1/150‑1 (MQ=255)

                                                                                                      GAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGcc                                               <  2:1268378‑M1/150‑1 (MQ=255)

                                                                                                      GAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAAGGCCGGTAAAGgtt                                                                                                                             <  1:2053296‑M1/73‑2 (MQ=255)

                                                                                                      GAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAAGGCCGGTAAAGgtt                                                                                                                             >  2:2053296‑M1/1‑72 (MQ=255)

                                                                                                        cccacaggccttgaaggcggcgtgggctacctgtgggagcgggcATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCAt                                             >  2:746804‑M2/45‑150 (MQ=255)

                                                                                                           aCGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTg                                          >  1:2892589/1‑150 (MQ=255)

                                                                                                           aCGCCGCCTTCAAGGCCTGTGGGCTACCTGGCGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCCGTACATTCAAACCCGTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCCTTTg                                          >  2:4057237/1‑150 (MQ=255)

                                                                                                            cgccgcCTACAAGCCCTCTGGGCTAACTGAGGGACCGGGCAAGCCCGCGAAAGGGCCGCCACACCTACCCCCCC‑TAAAAACAAAACCCCAGTAAATTCAAACCCTTCGCGAACGCTGTGGATTCCCGCTACCATCCCCCCTGCCATTTgc                                         <  2:2685412/150‑1 (MQ=255)

                                                                                                             gccgccTTCAAGGCCTGTGGTCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTgcg                                        >  1:3040279/1‑150 (MQ=255)

                                                                                                             gccgccTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTCCCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTgcg                                        >  1:2003315/1‑150 (MQ=255)

                                                                                                             gccgccTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCCTTTgcg                                        >  1:2477584/1‑150 (MQ=255)

                                                                                                             gccgccTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCCTGTgcg                                        >  1:4039491/1‑150 (MQ=255)

                                                                                                             gccgccTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTgcg                                        >  1:2003318/1‑150 (MQ=255)

                                                                                                              ccgccTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTgcgc                                       >  1:2917512/1‑150 (MQ=255)

                                                                                                              ccgccTACAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAACGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGAAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCAAGCATCCCCCCTGCCATTTgcgc                                       >  1:737073/1‑150 (MQ=255)

                                                                                                              caggccttgaaggcggcgtggttcctgtgggagcgggcATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTgcgc                                       >  2:4644375‑M2/39‑150 (MQ=255)

                                                                                                                 ccTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCaa                                    >  1:4703474/1‑150 (MQ=255)

                                                                                                                   ttCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCaata                                  >  2:1387595/1‑150 (MQ=255)

                                                                                                                       aGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAAtaataa                              <  2:302241/150‑1 (MQ=255)

                                                                                                                       aGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAAtaataa                              <  1:1992955/150‑1 (MQ=255)

                                                                                                                       aGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAAtaataa                              <  2:2726255/150‑1 (MQ=255)

                                                                                                                        ggCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAg                             <  1:3454126/150‑1 (MQ=255)

                                                                                                                            tgtgGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCCTTTGCGCCAAGAATAAGTTCa                         >  1:2330098/1‑150 (MQ=255)

                                                                                                                            tgtgGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCa                         >  2:3677121/1‑150 (MQ=255)

                                                                                                                            tgtgGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCa                         >  2:4612880/1‑150 (MQ=255)

                                                                                                                                  cTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCAAGCCCg                   <  1:1160417/150‑1 (MQ=255)

                                                                                                                                    aCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCAAGCCCGTa                 <  2:1007675/150‑1 (MQ=255)

                                                                                                                                    aCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCAAGCCCGTa                 >  2:657311/1‑150 (MQ=255)

                                                                                                                                        gtgggagcgggcATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCAAGCCCGTAgcgc             <  2:3956988‑M2/138‑1 (MQ=255)

                                                                                                                                         tgggagcgggcATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCtt                                                                                     >  2:2020783‑M2/12‑77 (MQ=255)

                                                                                                                                         tgggagcgggcATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCAAGCCCGTAGCGcc            >  2:1912528‑M2/12‑150 (MQ=255)

                                                                                                                                         tgggagcgggcATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCAAGCCCGTAGCGcc            >  1:1648566‑M2/12‑150 (MQ=255)

                                                                                                                                         tgggagcgggcATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCAAGCCCGTAGCGcc            <  2:1559593‑M2/139‑1 (MQ=255)

                                                                                                                                         tgggagcgggcATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCAAGCCCGTAGCGcc            <  1:2264294‑M2/139‑1 (MQ=255)

                                                                                                                                         tgggagcgggcATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCAAGCCCGTAGCGcc            >  2:3269800‑M2/12‑150 (MQ=255)

                                                                                                                                             agcgggcATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCAAGCCCGTAGCGCCCAAc        <  2:4928296‑M2/143‑1 (MQ=255)

                                                                                                                                              gcgggcATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAAGAATAACTTCAAGCCCGTAGCGCCCAAcc       <  2:5068692‑M2/144‑1 (MQ=255)

                                                                                                                                               cgggcATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCAAGCCCGTAGCGCCCAACCa      >  1:26707‑M2/6‑150 (MQ=255)

                                                                                                                                                 ggcATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATCATAAGTTCACGCCCGTAGCGCCCAACCCTc    >  2:1626015‑M2/4‑150 (MQ=255)

                                                                                                                                                   cATGCCCGCGAAAGGGCCGGCACAGGTACCCGCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCAAGCCCGTAGCGCCCAACCATCGa  <  2:1198635‑M2/149‑1 (MQ=255)

                                                                                                                                                   cATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCAAGCCCGTAGCGCCCAACCATCGa  <  1:34122‑M2/149‑1 (MQ=255)

                                                                                                                                                   cATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCAAGCCCGTAGCGCCCAACCATCGa  <  2:109418‑M2/149‑1 (MQ=255)

                                                                                                                                                   cATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCAAGCCCGTAGCGCCCAACCATCGa  <  1:162799‑M2/149‑1 (MQ=255)

CGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCC‑TAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCAAGCCCGTAGCGCCCAACCATCGA  >  NC_002947/5335077‑5335373

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.