New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5818832 =	41 (0.270)	10 (0.080)	6/240	NT	21.4%	intergenic (+40/+89)	PP_5092/pilT	NLP/P60 protein/twitching motility protein
	?	NC_002947	5818895 =	38 (0.290)					intergenic (+103/+26)	PP_5092/pilT	NLP/P60 protein/twitching motility protein

AGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCTGCATCACTGAAGACAACTGCGCCAACCGCCCCTCCCG  >  NC_002947/5818746‑5819040                                                                                                                                                      |                                                                                                                                                  cggacgatggagggggcgttgcggtggctgagggagcgagggttgttcaaaggcttgtcgtacctgcaaaggccctttcgcgggcgCGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGCGGGAGCGGgcgc                                                                                                                                                   >  2:3619523‑M1/87‑150 (MQ=255)   cGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGgcgcgc                                                                                                                                                 <  2:3279356/150‑1 (MQ=255)     ggTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGccc                                                                                                                                               <  1:4602620/150‑1 (MQ=255)     ggTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGccc                                                                                                                                               <  1:4602566/150‑1 (MQ=255)           gcCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCAAATACCTGTGGGAGCGGGCGCGCCCGCGaaa                                                                                                                                         <  1:384107/150‑1 (MQ=255)               aaaGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGc                                                                                                                                     >  2:2468969/1‑150 (MQ=255)                   agcagcagcTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCttt                                                                                                                                 <  2:4251053/150‑1 (MQ=255)                     ctgcagcTGAGTCTGGACAAGCTTTAAGCTGATCGGCGCTATCGGGTACGGGCCCCTTCGCGGGCACGCCCGCTCCCACTGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGGGGGCGCGGGCGCGCCCGCGAAAGGGCCTTTGc                                                                                                                               <  1:3896712/148‑1 (MQ=38)                     ccgaagcTGAGTCGGGCCACGCGTTACGCTTATGGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACCGGTAGCGCGTCGCTCTCGCGCGCAGCACACTCACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGc                                                                                                                               <  1:3896683/146‑1 (MQ=37)                     cagctgcTGTGTCTGGCCACGGGTTATGCTGATCGGGGCTATCGGGTCCCGGCCCCGGCGCGGGCACGCCCGCTCCCACCGGTCGCGCGTGGCTCTCGCGCGCAGCTCACTTACCTGTGGGAGGGGGCGCGCCCGCGAAAGGGCCTTTGc                                                                                                                               <  1:1819554/150‑1 (MQ=25)                     cagcagcTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGGGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGCGGGGGCGCGCCCGCGAAAGGGCCTTTGc                                                                                                                               <  1:3896667/150‑1 (MQ=255)                     cagcagcTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGc                                                                                                                               <  2:1111561/150‑1 (MQ=255)                      agcagcTGAGTCTGGCCACGCGTTACGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCCCCCACCGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCa                                                                                                                              <  1:2396511/150‑1 (MQ=255)                       ggcggctgcgggcgcgcgggttgatcaacggcttggagtacctgcaacggccccttcgggggcaCGCCCGCTCCCACAGGGAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAg                                                                                                                             >  1:3506055‑M1/65‑150 (MQ=255)                         agcTGAGTCGGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGt                                                                                                                           <  2:2739528/150‑1 (MQ=255)                                  tGGCCAAGCGTTATGGTGATCGGCGCTATGGGGTACCGGCCCGTTCGGGGGCACGCCGGCTCCCACTGGTTGGGGGTCGATCTCGCGCGAAGCTCAAATACTTGTGGTTGGGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGc                                                                                                                  <  1:58818/150‑1 (MQ=255)                                  tGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCCCATACCGGTGGGAGCGGGCGCGCCCGCGAAAGGGCCGTTGCAGGTACTACAAGc                                                                                                                  >  2:2476632/1‑150 (MQ=255)                                  tGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGc                                                                                                                  >  2:2476689/1‑150 (MQ=255)                                    gCCAAGCGTTACGCTGAGGGGCGCTAGCGGGTACCGGCCCCTTCGCGGGCCCCCCCGCCCCCCCAGGTAGCGCGTCGCTCTCGCGCGCAGCACACAAACCTGGGGGCGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCt                                                                                                                <  1:2787743/150‑1 (MQ=255)                                      cAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGGCGCGCGCGCGCGCAGCTCACATACCGGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGGACTACAAGCCgtt                                                                                                              >  2:4505862/1‑150 (MQ=38)                                        aGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGa                                                                                                            <  2:2770207/150‑1 (MQ=255)                                                gCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACAAACCAGTGGGAGCGGGCGCGCCCCCGAAAGGGCCGTTGGAGGTACAACAAGCCATTTTTCAAccca                                                                                                    >  1:4631545/1‑149 (MQ=38)                                                    aTCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACCCCCGCTCCCACAGGTAGCCCCTCGCGCACGCCCCCAGCTCACAAACCGGTGGGAGCCGGCCCCCCCCCGCAAGGGCCATTGCAGGTACTACAACCCATTGAAAAAccccccca                                                                                                >  2:3180343/1‑145 (MQ=255)                                                        gcgcTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGTGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGTTACTACAAGCCTTTGATCAACCCTCGATCCCt                                                                                            <  2:3993217/150‑1 (MQ=255)                                                        gcgcTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCACTCGCGCGCAGCTCACATACCTGTGGGCGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCACGCTCCCt                                                                                            >  2:4245897/1‑150 (MQ=255)                                                          gcTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCa                                                                                          <  2:1883992/150‑1 (MQ=255)                                                           cTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCGCCCCCAGGTAGCGCGTCGCTCTCGCGCGCAGCGCACATACCGGTGGGAGCGGGCGCGCCCGCGAAAGGGCCGTTGCAGGTACTACAAGCCGTTGATCAACCCACGCGCCCGCac                                                                                         >  2:323490/1‑149 (MQ=37)                                                                ctgcaaaggccctttcgcgggcgcgcccgctcccacaggtatgtgagctgcgcgcgagagcgacgcgctccctgtgggagcgggcgTGCCCCCGAAGGGGCCGTTGCAGGTACTCCAAGCCGTTGATCAACCCGCGCGCCCGCAgccgcc                                                                                    >  1:3506055‑M2/87‑150 (MQ=255)                                                                  gTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCCGCTCACATACCGGTGGGAGCGGGCGCGCCCGCGCAAGGGCCTTTGCCGGTCCTACAAGCCATTGATCACCCCGCGCGCCCACAGCCAcccc                                                                                  >  2:4599085/1‑148 (MQ=25)                                                                   tACCGGCCCCTTCGCGGGCACGCCCGCGCCCCCAGGTAGCGCGGCGCTCGCCCGCGCCGCGCGCAAACCCGTGGGAGCGGGCGCGCCCCCGGAACGGCCGTTGCACGTAAAACAACCCATTGATCAAACCGCGCACCCACCGCCACCCCa                                                                                 >  2:1962949/1‑150 (MQ=255)                                                                   tACCGGCCCCTTCGCGGGCACGCCCGCACCCACACGGAGCGCGTCGCACGAGCCCCCCGCGCGCCGAACAGTGGGGGCGGGCGCCCCCCCCCAACGGCCATTGCCGGTAAGACAACCCATTGGGCAAACCACGCGCCCACAaccaccccc                                                                                 >  2:1962321/1‑147 (MQ=255)                                                                     ccGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAAc                                                                               <  1:3929186/150‑1 (MQ=255)                                                                           ccTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGccccc                                                                         <  2:1170174/150‑1 (MQ=255)                                                                             ttCGCGGGCACGCCCGCTACCACAGGTAGCGCGTCTCTCACGCGCGCAGCTAACATACCGGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTAATACAAGCCATTGATCAACCCTCGCTCCCGCAGCCTCCGCAACccccccgc                                                                       >  2:234565/1‑148 (MQ=255)                                                                                      gcgcccgctcccgcaggtatgtgagctgcgcgcgagagcgacgcgctacctgtgggagcgggcgCGCCCGCGAAAGGGCCTTTGCAGGTACGACAAGCCTTTGAACAACCCTCGCTCCCTCAGCCACCGCAACGCCCCCTCCATCgtccg                                                              >  2:3619523‑M2/65‑148 (MQ=255)                                                                                      aCGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCGCCATCGTCAg                                                              >  2:1671953/1‑150 (MQ=255)                                                                                       CGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGc                                                             >  1:1096399‑M1/1‑150 (MQ=255)                                                                                        GCCCGCTCCCACAGGTCGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGCGCGGGCGCGCCCGCGAACGGGCCTGTGCAGGGACTACAAGCCTTTGATCCACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCGCCAGCGTCAgcc                                                            <  2:3966881‑M1/150‑2 (MQ=255)                                                                                          gaatTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATc                                                          >  2:876766‑M1/5‑150 (MQ=255)                                                                                          CCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAgcaac                                                          <  2:762357‑M1/150‑3 (MQ=255)                                                                                          CCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATc                                                          <  2:1957455‑M1/150‑1 (MQ=255)                                                                                          CCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCGTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCAACGTCAGCATc                                                          <  1:1434433‑M1/150‑1 (MQ=255)                                                                                            GCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATccc                                                        <  1:2322507‑M1/150‑1 (MQ=255)                                                                                              TCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCt                                                      <  2:488768‑M1/150‑1 (MQ=255)                                                                                               CCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGACTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTc                                                     >  2:234056‑M1/1‑150 (MQ=255)                                                                                                ccacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtgggagcgggcgTGCCCGCGAAGGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTcc                                                    >  1:4462921‑M2/55‑150 (MQ=255)                                                                                                ccacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtgggagcgggcgTGCCCGCG‑AAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTccg                                                   >  2:1730519‑M2/55‑150 (MQ=255)                                                                                                ccacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtgggagcgggcgCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTcc                                                    >  1:3577692‑M2/55‑150 (MQ=255)                                                                                                ccacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtgggagcgggcgCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCAcc                                                    >  2:2910421‑M2/55‑150 (MQ=255)                                                                                                 cacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtgggagcgggcgCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTccg                                                   >  1:1173141‑M2/54‑150 (MQ=255)                                                                                                  acaggtatgtgagctgcgcgcgagagcgacgcgctacctgtgggagcgggcgCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTccgc                                                  >  1:3026215‑M2/53‑150 (MQ=255)                                                                                                  ACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCcgccgc                                                  <  1:1136414‑M1/150‑1 (MQ=255)                                                                                                      gtatgtgagctgcgcgcgagagcgacgcgctacctgtgggagcgggcgTGCCCGCGAAGGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCgccgcc                                              >  1:3422565‑M2/49‑150 (MQ=255)                                                                                                      gtatgtgagctgcgcgcgagagcgacgcgctacctgtgggagcgggcgCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCCTCGTCAGCATCCCCTCCgccgcc                                              >  2:4706317‑M2/49‑150 (MQ=255)                                                                                                      GTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCgccgcc                                              <  2:2758098‑M1/150‑1 (MQ=255)                                                                                                        AGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGcccc                                            <  2:1385728‑M1/150‑1 (MQ=255)                                                                                                           gcgTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGccgccccccc                                         >  1:4250195/1‑150 (MQ=255)                                                                                                           gcgTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCAACGTCAGCATCCCCTCCGccgccccgcc                                         >  1:35855/1‑150 (MQ=255)                                                                                                             gTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCt                                       <  2:1167511/150‑1 (MQ=255)                                                                                                                    tcGCGCGCAGCTCACATACCTGTGGTAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCTGCATCAc                                <  2:695054/150‑1 (MQ=255)                                                                                                                        gcgcAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCTGCATCACTGaa                            <  2:4631545/150‑1 (MQ=255)                                                                                                                        gcgcAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCCCCCAGCAACACAGaa                            >  1:4703968/1‑150 (MQ=255)                                                                                                                        gcgcAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCAACGTCAGCATCCCCTCCGCCGCCCCCCCCAGCAACACAGaa                            >  1:531207/1‑150 (MQ=255)                                                                                                                        gcgcAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCACCATCGTCAGCATCCCCACCGCCGCCCCCCCCGGCATCACTGaa                            >  1:531184/1‑150 (MQ=255)                                                                                                                              cTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTACGCCGCCCCGCCCAGCATCACTGAAGACAAc                      >  2:1927592/1‑150 (MQ=255)                                                                                                                               tCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCTGCATCACTGAAGACAACt                     <  2:794383/150‑1 (MQ=255)                                                                                                                               tCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCTGCATCACTGAAGACAACt                     <  2:794130/150‑1 (MQ=255)                                                                                                                               tCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCACCCTCCATCGTCAGCATCCCCTACGCCGCCCCGCCCAGGATAACTGAAGTCAACt                     >  1:371025/1‑150 (MQ=255)                                                                                                                                     acctgtgggagcgggcgCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCTGCATCACTGAAGACAACTGCGCCa               >  1:3242512‑M2/18‑150 (MQ=255)                                                                                                                                     acctgtgggagcgggcgCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCAGCATCACTGAAGACAACTGCGCCa               >  1:677636‑M2/18‑150 (MQ=255)                                                                                                                                      cctgtgggagcgggcgCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCACCGCCGCCCCGCCCTGCATCACTGAAGACAACAGCGCCaa              >  1:3767944‑M2/17‑150 (MQ=255)                                                                                                                                        tgtgggagcgggcgCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCCTCGTCAGCATCCCCCCCCCCGCCCCCCCCGGCATCACAGGAGACAACAGCGCCCAcc            >  1:2533211‑M2/15‑150 (MQ=255)                                                                                                                                        tgtgggagcgggcgCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCTGCATCACTGAAGACAACTGCGCCAAcc            >  2:4244024‑M2/15‑150 (MQ=255)                                                                                                                                         gtgggagcgggcgCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCTGCATCACTGAAGACAACTGCGCCAACCg           <  2:1809034‑M2/137‑1 (MQ=255)                                                                                                                                           gggagcgggcgCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCTGCATCACTGAAGACAACTGCGCCAACCGcc         <  2:2322507‑M2/139‑1 (MQ=255)                                                                                                                                           gggagcgggcgCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCTGCATCACTGAAGACAACTGCGCCAACCGcc         >  1:4123566‑M2/12‑150 (MQ=255)                                                                                                                                             tcgcgggcgCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCACCGCCGCCCCGCCCAGCATCACTGAAGACAACTGCCCCAACCGcccc       >  2:4240138‑M2/10‑150 (MQ=255)                                                                                                                                               gcgggcgCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCAGCATAACAGAAGAAAACAGCGCCAaaccccccac     >  1:412675‑M2/8‑148 (MQ=255)                                                                                                                                                  ggcgCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCTGCATCACTGAAGACAACTGCGCCAACCGCCCCTCCCg  >  2:4445883‑M2/5‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                                  AGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCTGCATCACTGAAGACAACTGCGCCAACCGCCCCTCCCG  >  NC_002947/5818746‑5819040

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.