| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 78,506 | C→T | 8.7% | intergenic (‑34/+27) | fmt ← / ← def‑I | methionyl‑tRNA formyltransferase/peptide deformylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 78,506 | 0 | C | T | 8.7% | 538.8 / 28.9 | 184 | intergenic (‑34/+27) | fmt/def‑I | methionyl‑tRNA formyltransferase/peptide deformylase |
| Reads supporting (aligned to +/- strand): ref base C (73/95); new base T (10/6); total (83/101) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.90e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 186 total aligned reads displayed.
GCCGGCCGGGCGGTCGGGCTGGGTGTAGACGGCCACGATCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGAACAGCTTGCCGTTGAGGTGATCGAATTCGTGCTGTACGCACACCGC > NC_002947/78359‑78655 | gccggccgGGCGGTCGGGCTGGGTGTAGACGGCCACGATCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCgg > 1:4359600/1‑150 (MQ=255) gccggGCGGTCGGGCTGGGTGTAGACGGCCACGATCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCa > 2:4034381/1‑150 (MQ=255) ccggGCGGTCGGGCTGGGTGTAGACGGCCACGATCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCaa < 2:3073011/150‑1 (MQ=255) gggCGGTCGGGCTGGGTGTAGACGGCCACGATCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGc < 1:1630834/150‑1 (MQ=255) ggCGGTCGGGCTGGGTGTAGACGGCCACGATCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGcc < 2:2209857/150‑1 (MQ=255) cGGTCGGGCTGGGTGTAGACGGCCACGATCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCTCCGGCAAGCCtt < 1:3636967/150‑1 (MQ=255) ggTCGGGCTGGGTGTAGACGGCCACGATCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCTCCGGCAAGCCttt < 1:1211212/150‑2 (MQ=255) gTCGGGCTGGGTGTAGACGGCCACGATCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCTCCGGCAAGCCtttt < 1:1754240/150‑3 (MQ=255) tCGGGCTGGGTGTAGACGGCCACGATCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAGAAGGCTTGCTCCGGCAAGCCttttt < 2:2631647/150‑4 (MQ=255) gggTGTAGACGGCCACGATCTCGTAGGTGCTGTCGAGCAGGGACTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTACTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTg < 1:109855/150‑1 (MQ=255) gggTGTAGACGGCCACGATCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTg < 2:274318/150‑1 (MQ=255) gggTGTAGACGGCCACGATCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTg < 2:4691061/150‑1 (MQ=255) gggTGTAGACGGCCACGATCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTg < 1:2872091/150‑1 (MQ=255) ggTGTAGACGGCCACGATCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTgg > 1:2067878/1‑150 (MQ=255) aGACGGCCACGATCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATc < 1:221444/150‑1 (MQ=255) gACGGCCACGATCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCa > 2:3406016/1‑150 (MQ=255) gACGGCCACGATCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCa < 2:2497412/150‑1 (MQ=255) aCGGCCACGATCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAg < 1:1935316/150‑1 (MQ=255) aCGGCCACGATCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAg > 1:4184171/1‑150 (MQ=255) cGGCCACGATCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAgg < 1:103368/150‑1 (MQ=255) ggCCACGATCTCGGAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGc < 1:2874925/150‑1 (MQ=255) cACGATCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATTGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTg > 1:326433/1‑150 (MQ=255) cGATCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCt < 2:1890182/150‑1 (MQ=255) cGATCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCt < 2:4467090/150‑1 (MQ=255) gATCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAACAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTg < 2:1668593/150‑1 (MQ=255) gATCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTg > 1:4681167/1‑150 (MQ=255) gATCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTg < 1:3536259/150‑1 (MQ=255) aTCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTgg < 2:2095897/150‑1 (MQ=255) tcGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGa > 1:626322/1‑150 (MQ=255) tcGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGa < 2:334479/150‑1 (MQ=255) tcGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGa < 1:3701596/150‑1 (MQ=255) gTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGAtg > 1:834327/1‑150 (MQ=255) gggCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGAtgctgc < 2:3100872/150‑1 (MQ=255) gggCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGAtgctgc < 1:2863728/150‑1 (MQ=255) tGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCtttt > 2:4197507/1‑150 (MQ=255) tGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCtttt > 2:4197461/1‑150 (MQ=255) cGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGTCGATGGTGCTTTTCCa < 1:4110859/150‑1 (MQ=255) cGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCa < 1:4376858/150‑1 (MQ=255) gAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAg > 1:2316181/1‑150 (MQ=255) gAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAg > 1:2732272/1‑150 (MQ=255) gCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGcttcttc < 1:449093/150‑1 (MQ=255) ccTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGTAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGcttcttct < 1:3053158/150‑1 (MQ=255) ccTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGcttcttct < 1:3782705/150‑1 (MQ=255) ccTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGcttcttct < 2:2002489/150‑1 (MQ=255) ccTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGcttcttct < 2:541463/150‑1 (MQ=255) ttGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTg > 2:3227718/1‑150 (MQ=255) ggTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATcc > 1:1505817/1‑150 (MQ=255) gtgtTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCg > 1:4772810/1‑150 (MQ=255) gtgtTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCg > 2:4933482/1‑150 (MQ=255) tgtTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCgg < 2:3437032/150‑1 (MQ=255) tgtTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCgg < 2:1814741/150‑1 (MQ=255) ttCGGCGGCAAACTCTGGAGTGCCTGCATCGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGTTGCTGCTTTTCCAGCTTCTTCTTGATCCGGTc < 1:2906761/150‑1 (MQ=255) ttCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCGGTc < 2:498200/150‑1 (MQ=255) gcggcAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCGGTCgcgc < 2:4330727/150‑1 (MQ=255) gcAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCGGTCGCGCTTg > 1:1057519/1‑150 (MQ=255) cAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCGGTCGCGCTTGa < 2:3847784/150‑1 (MQ=255) cAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGGTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATAAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCGGTCGCGCTTGa < 2:1367310/150‑1 (MQ=255) aaaCTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCGGTCGCGCTTGAg < 2:1483893/150‑1 (MQ=255) aaaCTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCGGTCGCGCTTGAg > 2:4698311/1‑150 (MQ=255) aaaCTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCGGTCGCGCTTGAg > 2:2155461/1‑150 (MQ=255) tctGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGc < 2:1496677/150‑1 (MQ=255) tctGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGc < 2:4681167/150‑1 (MQ=255) tctGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGc > 1:1358662/1‑150 (MQ=255) tGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGa < 1:1151434/150‑1 (MQ=255) aGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAg > 2:3403854/1‑150 (MQ=255) aGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAg < 2:834327/150‑1 (MQ=255) aGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCGGTCGCGCTCGAGCTGCGACAg < 2:1944482/150‑1 (MQ=255) gTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAgg < 1:2538909/150‑1 (MQ=255) gTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAgg > 1:2089341/1‑150 (MQ=255) tGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTC‑AAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTa < 1:9449/150‑1 (MQ=255) cTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAGGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGt > 2:570251/1‑150 (MQ=255) cAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTcga < 2:923630/150‑1 (MQ=255) aaaGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTcgac > 1:792667/1‑150 (MQ=255) aTGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGAACAGc < 1:1876740/150‑1 (MQ=255) gcATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTc < 2:279921/91‑1 (MQ=255) gcATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGAACAGCTTGc > 2:3584369/1‑150 (MQ=255) cATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGAACAGCTTGcc > 1:2261849/1‑150 (MQ=255) aTGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGAACAGCTTGCCg < 1:1877868/150‑1 (MQ=255) ggtctcGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGAACAGCTTGCCGTTGAg < 1:2474184/148‑1 (MQ=255) tcGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGAACAGCTTGCCGTTGAGGTGa > 2:4196660/1‑150 (MQ=255) gCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGAACAGCTTGCCGTTGAGGTGATc < 1:2819190/150‑1 (MQ=255) gCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGAACAGCTTGCCGTTGAGGTGATc < 1:3852678/150‑1 (MQ=255) ttCAAAAAAGAAAATGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGAACAGCTTGCCGTTGAGGTGATCGa > 2:5048934/1‑150 (MQ=255) aaaaaaGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGa < 2:5011219/87‑1 (MQ=255) aaaagaaaaagGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGAACAGCTTGCCGTTGAGGTGATCGAATTCg > 1:1737908/1‑150 (MQ=255) aaagaaaaagGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGAACAGCTTGCCGTTGAGGTGATCGAATTCGt > 2:1028765/1‑150 (MQ=255) aaagaaaaagGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCCTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGAACAGCTTGCCGTTGAGGTGATCGAATTCGt > 1:2646819/1‑150 (MQ=255) aagaaaaagGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGAACAGCTTGCCGTTGAGGTGATCGAATTCGTg > 2:1156106/1‑150 (MQ=255) aagaaaaagGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGAACAGCTTGCCGTTGAGGTGATCGAATTCGTg > 1:294171/1‑150 (MQ=255) agaaaaagGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGAACAGCTTGCCGTTGAGGTGATCGAATTCGTGc > 1:5043060/1‑150 (MQ=255) agaaaaagGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGAACAGCTTGCCGTTGAGGTGATCGAATTCGTGc < 2:2465044/150‑1 (MQ=255) gaaaaagGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGAACAGCTTGCCGTTGAGGTGATCGAATTCGTGCt < 2:1820461/150‑1 (MQ=255) tgaagGCTTGCTCCGGCAAGCCTTTAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGAGAGGTAGTCGACGAACAGCTTGCCGTTGAGGTGATCGAATTCGTGCTGt > 1:3142785/3‑150 (MQ=255) tgaagGCTTGCTCCGGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTgg > 2:2901606/3‑51 (MQ=18) tgaagGCTTGCTCCGGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGAACAGCTTGCCGTTGAGGTGATCGAATTCGTGCTGt > 2:1409382/3‑150 (MQ=255) tgaagGCTTGCTCCGGCAAGCCCTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGAACAGCTTGCCGTTGAGGTGATCGAATTCGTGCTGt > 1:3620819/3‑150 (MQ=255) aaaagGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGAACAGCTTGCCGTTGAGGTGATCGAATTCGTGCTGt < 1:1410116/150‑1 (MQ=255) gCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGAACAGCTTGCCGTTGAGGTGATCGAATTCGTGCTGTACGCACAcc < 1:2738904/150‑1 (MQ=255) ccGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGAACAGCTTGCCGTTGAGGTGATCGAATTCGTGCTGTACGCACACCg < 1:4984715/150‑1 (MQ=255) cGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGAACAGCTTGCCGTTGAGGTGATCGAATTCGTGCTGTACGCACACCGc > 1:652425/1‑150 (MQ=255) | GCCGGCCGGGCGGTCGGGCTGGGTGTAGACGGCCACGATCTCGTAGGGGCTGTCGAGCAGGGCCTTGAGGTGTTCGGCGGCAAACTCTGGAGTGCCTGCAAAGACGATGCGCATGGAGTTCTCGCTTCAAAAAAGAAAAAGGCTTGCCGGAGCAAGCCTTCAGGAAGGTGGGGATCAGGCTTGCTGGCGATGCTGCTTTTCCAGCTTCTTCTTGATCCGGTCGCGCTTGAGCTGCGACAGGTAGTCGACGAACAGCTTGCCGTTGAGGTGATCGAATTCGTGCTGTACGCACACCGC > NC_002947/78359‑78655 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |