| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,639,501 | A→T | 5.2% | intergenic (‑49/‑262) | czcR‑III ← / → PP_1439 | response regulator/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,639,501 | 0 | A | T | 5.2% | 442.9 / 8.1 | 133 | intergenic (‑49/‑262) | czcR‑III/PP_1439 | response regulator/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (46/80); new base T (4/3); total (50/83) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.25e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 134 total aligned reads displayed.
GCCTGTGTGGGCGCAGTCGACCACGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTACCCGCGAAGAGGCC > NC_002947/1639354‑1639650 | gCCTGTGTGGGCGCAGTCGACCACGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATc < 1:2065302/150‑1 (MQ=255) ccTGTGTGGGCGCAGTCGACCACGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCa < 1:3740156/150‑1 (MQ=255) cTGTGTGGGCGCAGTCGACCACGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAg > 2:1989783/1‑150 (MQ=255) cTGTGTGGGCGCAGTCGACCACGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAg < 2:1538238/150‑1 (MQ=255) cTGTGTGGGCGCAGTCGACCACGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAg > 1:1504065/1‑150 (MQ=255) cTGTGTGGGCGCAGTCGACCACGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAg > 1:3360110/1‑150 (MQ=255) gtgtgGGCGCAGTCGACCACGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAggg < 2:1681078/150‑1 (MQ=255) gtgGGCGCAGTCGACCACGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGATGTCACTACAGGGTc < 1:1043207/150‑1 (MQ=255) gcgcAGTCGACCACGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGATGTCACTACAGGGTCAAga < 1:134674/150‑2 (MQ=255) aGTCGACCACGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCTTGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGccc < 1:1257210/150‑1 (MQ=255) cGACCACGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCaa < 1:4656261/150‑1 (MQ=255) gACCACGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTCGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCACGCGCCCCAAt > 1:1957277/1‑150 (MQ=255) gACCACGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAAt < 2:868520/150‑1 (MQ=255) gACCACGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAAt < 2:1626675/150‑1 (MQ=255) gACCACGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAAt > 2:3815690/1‑150 (MQ=255) gACCACGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAAt > 1:1280798/1‑150 (MQ=255) aCCACGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCAGGGGGGGCTCGGTATGTGGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATg > 1:2522965/1‑150 (MQ=255) cACGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATGCTTGACCCTGATGTCACTACAGGGTCAAgaatc > 2:3508019/1‑138 (MQ=38) cACGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATGCTTGACCCTGATGTCACTACAGGGTCAAgaatc < 1:3508019/142‑5 (MQ=38) cGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTAc < 2:3349411/150‑1 (MQ=255) gTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACg < 1:2079450/150‑1 (MQ=255) gTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACg > 1:2369704/1‑150 (MQ=255) ccGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCAt < 2:3741328/150‑1 (MQ=255) gTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGa > 1:2256219/1‑150 (MQ=255) tcGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGc > 1:3578501/1‑142 (MQ=255) cgcgAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGaaaaaa < 1:737237/150‑1 (MQ=255) cgcgAAGGCCCTGGTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGTGACGTTTCTTGACCCTGTCGTGACATCAGGGTGACGCGCCCCAATGTTACGGCATGaaataa < 2:1444387/150‑1 (MQ=255) gcgAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAg > 1:815014/1‑150 (MQ=255) gcgAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAg < 1:5057301/150‑1 (MQ=255) gAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGc < 2:2005816/150‑1 (MQ=255) ggCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTg < 1:4595782/150‑1 (MQ=255) gCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGc < 1:3189938/150‑1 (MQ=255) cccTGTTGCATGTAGTCGGCTGTACGCAGCTCGTACTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGTCAGGGGACGATTCTTGACCCTGTAGTTACATCAGGGTCAAGCGCCCCTATGTTACGGCATGAAAAAAGGCCTGCg < 2:773067/150‑1 (MQ=255) cccTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCg > 1:1008029/1‑150 (MQ=255) cccTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCg > 1:3195839/1‑150 (MQ=255) ccTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCgg > 1:3288123/1‑150 (MQ=255) ccTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCgg > 2:1708994/1‑150 (MQ=255) tGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTg > 1:1308743/1‑150 (MQ=255) ttGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCa < 1:3498946/150‑1 (MQ=255) ttGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTGGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCa < 2:3048242/150‑1 (MQ=255) gTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAAc < 1:1909688/150‑1 (MQ=255) tAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACg < 1:4217239/150‑1 (MQ=255) gTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGa < 2:1411473/150‑1 (MQ=255) gTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGa < 1:1479633/150‑1 (MQ=255) tCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGAt > 2:2939682/1‑150 (MQ=255) tCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGAt < 2:3571028/150‑1 (MQ=255) tCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGAt > 1:226982/1‑150 (MQ=255) gTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTaa < 2:2369704/150‑1 (MQ=255) aCGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAAtt < 2:4910655/150‑1 (MQ=255) gCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATGTGTAATTct > 1:4000265/1‑150 (MQ=255) gCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTctgct < 1:3324612/150‑1 (MQ=255) tCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGt > 2:4993990/1‑150 (MQ=255) tCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGt > 2:221284/1‑150 (MQ=255) tCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGt < 1:4674524/150‑1 (MQ=255) ccTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATc < 2:8219/150‑1 (MQ=255) cTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACTTCAGGGTCCATCGCCCCAATGTTAGGGCATGACAAAAGGCCGGCGGTGCAGAGAAGGGCTTTGTAATTCTGGTGTTATCt > 1:4576570/1‑150 (MQ=255) cTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCt < 1:4666341/150‑1 (MQ=255) tCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTg > 2:3844898/1‑150 (MQ=255) cGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTgg < 2:4098420/150‑1 (MQ=255) gatgatCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGc > 2:4754762/1‑150 (MQ=255) atgatCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGct < 1:767357/150‑1 (MQ=255) gTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAGAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGtt > 1:4223496/1‑150 (MQ=255) tAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTc > 1:3850118/1‑150 (MQ=255) aGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCg < 1:1805730/150‑1 (MQ=255) ggCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCgg < 2:2283796/150‑1 (MQ=255) gggCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTcgc < 1:4834714/150‑1 (MQ=255) gggCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTcgc < 2:1008029/150‑1 (MQ=255) gggCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTcgc < 1:4834735/150‑1 (MQ=255) gCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGa < 2:4706351/150‑1 (MQ=255) gCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGa < 2:3256483/150‑1 (MQ=255) tCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGt > 2:558538/1‑150 (MQ=255) aTGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAAcc > 2:454122/1‑150 (MQ=255) aTGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAAcc < 2:3879312/150‑1 (MQ=255) aaGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCt < 2:3952283/150‑1 (MQ=255) aaGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAAACCGCGCCt > 1:1752017/1‑150 (MQ=255) aGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGGGTAAACCcgttccta < 1:3269594/150‑7 (MQ=255) ggggACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGGGTAAACCcgttcctac < 1:1989757/150‑8 (MQ=255) ggggACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCcgttcctac < 2:1308743/150‑8 (MQ=255) ggggACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGt > 1:4418919/1‑150 (MQ=255) gggACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTa > 1:1031267/1‑150 (MQ=255) gggACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTa < 1:2280003/150‑1 (MQ=255) gggACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTa < 1:4441897/150‑1 (MQ=255) gATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGTCTGTCTGTTCGTGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAAc > 2:186223/1‑150 (MQ=255) ttCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACgg < 2:4093185/150‑1 (MQ=255) ttCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACgg < 2:4193158/150‑1 (MQ=255) tCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACggg < 1:3815690/150‑1 (MQ=255) ttGACCCTGTAGTGACATCAGGGTCAAGCGCCCCACTGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGGGTAAACCCGTTCCTACAGGCGCGGGtt < 2:3989454/150‑1 (MQ=37) ttGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGGGTAAACCCGTTCCTACAGGCGCGGGtt > 2:2550141/1‑150 (MQ=38) ttGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGtt > 1:3380413/1‑150 (MQ=255) ttGACCCTGATGTCACTACAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGtt > 2:1987765/1‑150 (MQ=255) ttGACCCTGATGTCACTACAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGtt > 2:4563743/1‑150 (MQ=255) aCCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTAc < 1:4344349/150‑1 (MQ=255) aCCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTAc < 1:1888243/150‑1 (MQ=255) gTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTACCcgcg > 2:4360817/1‑150 (MQ=255) aGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGGGTAAACCCGTTCCTACAGGCGCGGGTTTACTCGCGaa < 1:2550141/150‑1 (MQ=37) gTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGTTCCTACAGGCGCGGGTTTACTCGCGAag < 2:1957277/150‑1 (MQ=37) gTGACATCAGGGTCAAGCGCCCCAATGTTACCGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGTTCCTACAGGCGCGGGTTTACTCGCGAag < 2:1280798/150‑1 (MQ=37) aCATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTACCCGCGAAGAgg < 1:3018980/150‑1 (MQ=255) cATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGGGTAAACCCGTTCCTACAGGCGCGGGTTTACTCGCGAAGAGGc < 1:2102169/150‑1 (MQ=25) aTCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTGTTAGCGAGTAAAACCGCGCCTGTAGGAACGGGTTTACCCGCGAAGAgggc > 1:3602052/1‑148 (MQ=255) | GCCTGTGTGGGCGCAGTCGACCACGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTACCCGCGAAGAGGCC > NC_002947/1639354‑1639650 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |