| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,639,627 | A→C | 16.6% | intergenic (‑175/‑136) | czcR‑III ← / → PP_1439 | response regulator/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,639,627 | 0 | A | C | 16.6% | 257.8 / 43.5 | 108 | intergenic (‑175/‑136) | czcR‑III/PP_1439 | response regulator/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (51/39); new base C (10/8); total (61/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.87e-01 | |||||||||||
Only 100 of 108 total aligned reads displayed.
GATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTACGAGGCAAACACGATGAACCTGACCA > NC_002947/1639480‑1639775 | gATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGTCTGTCTGTTCGTGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAAc > 2:186223/1‑150 (MQ=255) ttCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACgg < 1:913965/150‑1 (MQ=255) ttCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACgg < 2:4193158/150‑1 (MQ=255) ttCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACgg < 2:4093185/150‑1 (MQ=255) tCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACggg < 1:3815690/150‑1 (MQ=255) ttGACCCTGTAGTGACATCAGGGTCAAGCGCCCCACTGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGGGTAAACCCGTTCCTACAGGCGCGGGtt < 2:3989454/150‑1 (MQ=37) ttGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGGGTAAACCCGTTCCTACAGGCGCGGGtt > 2:2550141/1‑150 (MQ=38) ttGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGtt > 1:3380413/1‑150 (MQ=255) aCCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTT‑Ac < 1:4344349/150‑1 (MQ=255) aCCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTT‑Ac < 1:1888243/150‑1 (MQ=255) ccTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGGGTAAACCCGTTCCTACAGGCGCGGGTTT‑Actc < 2:3288123/150‑3 (MQ=37) ccTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGTTCCTACAGGCGCGGGTTT‑Actc < 1:1891067/150‑3 (MQ=38) ccTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTT‑Accc < 2:425767/150‑1 (MQ=255) tGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCcgc < 2:179639/150‑1 (MQ=255) gTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCcgcg > 2:4360817/1‑150 (MQ=255) aGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGGGTAAACCCGTTCCTACAGGCGCGGGTTT‑ACTCGCGaa < 1:2550141/150‑1 (MQ=37) gTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGTTCCTACAGGCGCGGGTTT‑ACTCGCGAag < 2:1957277/150‑1 (MQ=37) gTGACATCAGGGTCAAGCGCCCCAATGTTACCGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGTTCCTACAGGCGCGGGTTT‑ACTCGCGAag < 2:1280798/150‑1 (MQ=37) tGACATCATGTTCAAGCGCCCCAATGTTACGTCATGAAAAAAGGCCTGAGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAaga < 2:2256219/150‑1 (MQ=255) gACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAagag < 2:1589038/150‑1 (MQ=255) aCATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAgg < 1:3018980/150‑1 (MQ=255) cATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGGGTAAACCCGTTCCTACAGGCGCGGGTTT‑ACTCGCGAAGAGGc < 1:2102169/150‑1 (MQ=25) aTCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTGTTAGCGAGTAAAACCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAgggc > 1:3602052/1‑148 (MQ=255) aGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTcc > 2:1498880/1‑150 (MQ=255) aGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTcc > 2:1834579/1‑150 (MQ=255) cccAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCcacaca > 1:3771575/1‑150 (MQ=255) cccAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCcacaca > 1:3771577/1‑150 (MQ=255) cccAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCcacaca > 2:3651536/1‑150 (MQ=255) cccAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCGGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCcacaca > 1:3574450/1‑150 (MQ=255) cattGTTACGGCATGAAAAAAGGCCGGCGGTGCAGATACCGGATTTTTAATTCGGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAACCCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGACGAGGCCCGAACAGTCCACACAAg < 2:2308408/147‑1 (MQ=255) cAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTTTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGTTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAg < 1:2939682/150‑1 (MQ=255) cAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAg > 2:4888695/1‑150 (MQ=255) tGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGcc > 2:2273374/1‑150 (MQ=255) tGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGcc > 1:2971523/1‑150 (MQ=255) tGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAgg > 2:4723948/1‑150 (MQ=255) tGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAgg > 2:3519307/1‑150 (MQ=255) aaaaaGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGAcc < 2:3771577/150‑2 (MQ=255) aaaaaGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCGGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACt < 2:3360110/150‑1 (MQ=255) aaaaGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTg < 2:2522965/150‑1 (MQ=255) aaaGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGt > 1:794041/1‑150 (MQ=255) aaaGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCGGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGt > 1:1382048/1‑150 (MQ=255) tGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGTCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAAtacac > 2:159264/1‑146 (MQ=255) tAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACAATGCAGGACTGTAATCCCCGCCTCACCTTg > 1:3222293/1‑150 (MQ=255) aaCGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGc < 2:1241415/150‑1 (MQ=255) aaCGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGc < 2:3850118/150‑1 (MQ=255) cGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCg > 2:627355/1‑150 (MQ=255) ggATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGt > 1:2497549/1‑150 (MQ=255) ggATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGt > 2:2913556/1‑150 (MQ=255) ttGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTagc > 2:3945577/1‑150 (MQ=255) ctgctgTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTc < 2:4296081/150‑1 (MQ=255) tgTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTa < 2:3195839/150‑1 (MQ=255) tATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTTTACGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGa < 1:4993990/150‑1 (MQ=255) aTCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACACGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGAt > 2:4737137/1‑150 (MQ=255) aTCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGAt > 2:4737126/1‑150 (MQ=255) tgtctgtTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCgtg > 1:1184461/1‑150 (MQ=255) tcggtccGGGCCTCTACGCGAGTAACCCCGCGCCTGTAGGAACGGTTTT‑ACCCGCCAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTc < 1:1336780/144‑1 (MQ=255) gctgtTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTc < 2:226982/149‑1 (MQ=255) gtTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGa > 2:2388549/1‑150 (MQ=255) tCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATc < 2:4546768/150‑1 (MQ=255) tCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATc < 2:350699/150‑1 (MQ=255) cGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCg < 2:4418919/150‑1 (MQ=255) gggCCTCTTGGCGAGTAAACCCGCGCCTGTAGGAACCGGTTT‑ACCCGCGCAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACGGTAATACCCGCCGCACCATTCCCTTAGCCACCCCTCGCTAGGATGGCCGTGTCTGATCgg > 1:3865524/1‑150 (MQ=255) gggCCTCTTCGCGTGTAAACCCGGGCCTGT‑CGCACGGGTTTAACCCGCGCCGCGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCgg < 1:4754762/150‑1 (MQ=255) gggCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCgg > 2:175403/1‑150 (MQ=255) ggCCTCTGCGCGAGAAAACCCGCGCGTGTCGGACGGGGTTC‑ACCCGCGAAGAGCCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGt < 1:4360817/150‑1 (MQ=255) tctTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGttatt > 1:2639512/1‑150 (MQ=255) tctTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGttatt < 2:2838813/150‑1 (MQ=255) ttCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGttattag > 2:4624170/1‑149 (MQ=255) ttCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTAc > 1:4162018/1‑150 (MQ=255) cgcgcgTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTACGa < 2:2193702/150‑1 (MQ=255) gcgGGTAAACCCGTTCCTACAGGCGCAGGTTT‑ACTCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTACGAg > 2:3638586/1‑150 (MQ=37) gcgAGTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGTACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTACGAg > 1:2741658/1‑150 (MQ=255) gcgAGTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTACGAg < 2:1031267/150‑1 (MQ=255) cgAGTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTACGAgg > 2:1011352/1‑150 (MQ=255) gggTAAACCCGTTCCTACAGGCGCGGGTTT‑ACTCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTACGAGGc > 2:4895726/3‑150 (MQ=37) gggTAAACCCGTTCCTACAGGCGCGGGTTT‑ACTCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTACGAGGc > 2:3520599/3‑150 (MQ=37) ggTAAACCCGTTCCTACAGGCGCGGGTTT‑ACTCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTACGAGGCa > 1:1910985/2‑150 (MQ=37) ggTAAACCCGTTCCTACAGGCGCGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTACGAGGCa > 1:4359029/2‑150 (MQ=38) aGTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTACGAGGCa > 1:275331/1‑150 (MQ=255) gTAAACCCGTTCCTACAGGCGCGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTACGAGGCaa > 2:4889823/1‑150 (MQ=38) gTAAACCCGTTCCTACAGGCGCGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTACGAGGCaa > 1:1719178/1‑150 (MQ=38) aaaCCCGTTCCTACAGGCGCGGGTTT‑ACTCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTACGAGGCAAac > 2:144000/1‑150 (MQ=38) aaaCCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAATAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTACGAGGCAAac > 2:4679118/1‑150 (MQ=255) aCCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTACGAGGCAAacac > 1:4573157/1‑150 (MQ=255) aCCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTACGAGGCAAacac > 2:375891/1‑150 (MQ=255) aCCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTACGAGGCAAacac > 2:1146269/1‑150 (MQ=255) cccGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTACGAGGCAAACACg > 2:3352730/1‑150 (MQ=255) cccGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTACGAGGCAAACACg > 2:3352603/1‑150 (MQ=255) ccGCGCCTGTCGGAACGGGTTC‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTACGAGGCAAACACGa < 1:4723948/150‑1 (MQ=255) ccGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTACGAGGCAAACACGa > 2:2249662/1‑150 (MQ=255) ccGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTACGAGGCAAACACGa > 1:3181565/1‑150 (MQ=255) ccGCGCCTGGAGGACCGGGTTG‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCTGGACTGTAATCGCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTATTATCGGTTATTTCGAGGCATACACGa < 2:4000265/150‑1 (MQ=255) gcgcCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTTGGATGGCCGTGTCTGATCGGTTATTACGAGGCAAACACGATg < 2:4657456/150‑1 (MQ=255) gcgcCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTACGAGGCACACACGATg > 2:4918907/1‑150 (MQ=255) cccgTAGGAACGGGTTG‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATGGCAGGACTGTAATCCCCGCCGCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTACGAGGCAAACACGATGAAc < 2:4576570/147‑1 (MQ=255) ccTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTACGAGGCAAACACGATGAAc < 2:3380413/150‑1 (MQ=255) tAGGAACGGGGTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTACGAGGCAAACACGATGAACCTGa > 2:2752803/1‑150 (MQ=255) tAGGAACGGGGTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTACGAGGCAAACACGATGAACCTGa > 2:2752807/1‑150 (MQ=255) ggAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTACGAGGCAAACACGATGAACCTGAcc > 2:4221164/1‑150 (MQ=255) gAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTACGAGGCAAACACGATGAACCTGACCa > 1:4010776/1‑150 (MQ=255) | GATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTT‑ACCCGCGAAGAGGCCCGAACAGTCCACACAAGGCCACATTGCAGGACTGTAATCCCCGCCTCACCTTGCCGTTAGCCAGCCCTCGCTAGGATGGCCGTGTCTGATCGGTTATTACGAGGCAAACACGATGAACCTGACCA > NC_002947/1639480‑1639775 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |