| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,670,669 | T→G | 5.3% | intergenic (+50/‑45) | rplS → / → PP_1466 | 50S ribosomal protein L19/acyl‑CoA thioesterase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,670,669 | 0 | T | G | 5.3% | 549.2 / 12.8 | 163 | intergenic (+50/‑45) | rplS/PP_1466 | 50S ribosomal protein L19/acyl‑CoA thioesterase |
| Reads supporting (aligned to +/- strand): ref base T (87/67); new base G (7/2); total (94/69) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.04e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 164 total aligned reads displayed.
CCTGGCCGTGAAACGTCGTGGTGACGTGCGTAAAGCCAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATACCACCAACCACCACAACACCCTGT > NC_002947/1670520‑1670816 | ccTGGCCGTGAAACGTCGTGGTGACGTGCGTAAAGCCAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCtt > 2:4460204/1‑150 (MQ=255) cTGGCCGTGAAACGTCGTGGTGACGTGCGTAAAGCCAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTc < 1:2340083/150‑1 (MQ=255) tGGCCGTGAAACGTCGTGGTGACGTGCGTAAAGCCAACCTGTACTACCTCCGCGACCTGTCCCGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGAGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCg > 2:839245/1‑150 (MQ=255) cGTGAAACGTCGTGGTGACGTGCGTAAAGCCAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGgct > 2:322251/1‑150 (MQ=255) gTGAAACGTCGTGGTGACGTGCGTAAAGCCAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGgctg > 1:2165718/1‑150 (MQ=255) gTGAAACGTCGTGGTGACGTGCGTAAAGCCAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGgctg < 1:2402146/150‑1 (MQ=255) aaCGTCGTGGTGACGTGCGTAAAGCCAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCttt > 2:5072127/1‑150 (MQ=255) aaCGTCGTGGTGACGTGCGTAAAGCCAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCttt < 1:3161742/150‑1 (MQ=255) cgtcgtGGTGACGTGCGTAAAGCCAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCttttt < 1:1370438/150‑1 (MQ=255) cgtcgtGGTGACGTGCGTAAAGCCAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCttttt < 1:999291/150‑1 (MQ=255) cgtcgtGGTGACGTGCGTAAAGCCAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCttttt > 1:3339921/1‑150 (MQ=255) gtcgtGGTGACGTGCGTAAAGCCAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCtttttt < 2:3040786/150‑1 (MQ=255) gtcgtGGTGACGTGCGTAAAGCCAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCtttttt < 2:1996785/150‑1 (MQ=255) gtcgtGGTGACGTGCGTAAAGCCAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCtttttt < 1:3505389/150‑1 (MQ=255) tgACGTGCGTAAAGCCAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGtttt < 1:2561208/150‑1 (MQ=255) cGTGCGTAAAGCCAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGaa < 2:1911243/150‑1 (MQ=255) cGTGCGTAAAGCCAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGaa < 2:1911378/150‑1 (MQ=255) gTGCGTAAAGCCAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGaaa < 2:1445009/150‑1 (MQ=255) gTGCGTAAAGCCAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGaaa < 1:3417879/150‑1 (MQ=255) gTGCGTAAAGCCAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGaaa < 1:3417937/150‑1 (MQ=255) tGCGTAAAGCCAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAAc > 2:3765733/1‑150 (MQ=255) gTAAAGCCAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAAcccc > 2:2514207/1‑150 (MQ=255) gTAAAGCCAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCCGAAGGCTGCTTTTTTGCGTTTTGAAAcccc > 2:414116/1‑150 (MQ=255) tAAAGCCAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGGTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCg > 2:138178/1‑150 (MQ=255) aaaGCCAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGa > 1:2006469/1‑150 (MQ=255) cAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAAtg < 1:1545355/150‑1 (MQ=255) cAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAAtg < 1:1545536/150‑1 (MQ=255) cAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAAtg > 2:2417737/1‑150 (MQ=255) aaGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAAtgt > 2:4488624/1‑150 (MQ=255) aaGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAAtgt > 1:2533711/1‑150 (MQ=255) aGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAAtgtg > 2:2763468/1‑150 (MQ=255) tGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGAtt < 1:2281477/150‑1 (MQ=255) ctacCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCa < 1:678030/150‑1 (MQ=255) ctacCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGACCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAAACCCGAAAATGTGATTGCCa > 1:4286906/1‑150 (MQ=255) tacCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCAt > 1:53822/1‑150 (MQ=255) tacCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCCGAAGGCTGCttt > 1:3128976/1‑115 (MQ=255) acCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGAGTTTTGAAACACCGAAAATGTGATTGCCATg > 1:4401397/1‑150 (MQ=255) ccTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATga > 2:1114897/1‑150 (MQ=255) ccTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATga < 1:550144/150‑1 (MQ=255) ccTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATga > 2:4827358/1‑150 (MQ=255) cTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCTGAAAATGTGATTGCCATgac > 2:180566/1‑150 (MQ=255) cTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATgac < 1:850586/150‑1 (MQ=255) cTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATgac > 1:654660/1‑150 (MQ=255) tGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCtttttt < 2:3217959/114‑1 (MQ=255) cgACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGAccc < 1:4460204/150‑1 (MQ=255) ccTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGTCCCgag > 1:4563785/1‑150 (MQ=255) cTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCgaga < 2:3960324/150‑1 (MQ=255) cTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCgaga > 1:549601/1‑150 (MQ=255) tGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGAc > 2:3601005/1‑150 (MQ=255) tCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCa > 1:4001202/1‑150 (MQ=255) ccGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAg < 1:3631726/150‑1 (MQ=255) cGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAgg < 1:298577/150‑1 (MQ=255) gCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCa > 2:3524600/1‑150 (MQ=255) gCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAgcg > 1:2994921/1‑150 (MQ=255) tCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCAcc < 1:2456139/150‑1 (MQ=255) tCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCAcc > 1:81220/1‑150 (MQ=255) cAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCg > 1:3726006/1‑150 (MQ=255) aGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGaa < 1:4142202/150‑1 (MQ=255) ggAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAAc > 1:3762587/1‑150 (MQ=255) ggAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCACGAAAATGTGATTGCCATGACGACACGATACCAGGAAATCCATACCCGCACCGAAc > 1:2656302/1‑150 (MQ=255) aaaaaCTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTg > 1:4843343/1‑150 (MQ=255) aaatCTGTCCTGATTTCAGTTTGCTCGGTGGCCGAGGGCGCCTTGCGAGAAAATATAAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACGCCGTAAATGTGTTTGCGTTGACGTCCCGTTTCCAGGATATGGAGCGCCGCACCGAACTGt < 2:2138963/150‑1 (MQ=255) aaaaCTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGt < 2:1501054/150‑1 (MQ=255) aaaaCTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGt < 2:84084/150‑1 (MQ=255) aaCTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCg < 1:4064216/150‑1 (MQ=255) aaCTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCg < 2:1739592/150‑1 (MQ=255) cTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGt < 1:1370304/150‑1 (MQ=255) tCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGcgcc > 2:500724/1‑131 (MQ=255) tCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGcgcc < 1:500724/131‑1 (MQ=255) cTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGAccc > 1:3312050/1‑150 (MQ=255) cTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCCTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGAccc > 2:4702202/1‑150 (MQ=255) cTGAGTGCAGTTTGCCCGGTGGCCGAGGCAGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGAccc > 2:2494762/1‑150 (MQ=255) gAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGATTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCcgc < 1:99083/150‑1 (MQ=255) cAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGTGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTAc < 2:4846275/150‑1 (MQ=255) aGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGTGCCGCACCGAACTGTCGGTGACCCGCGTTAcc > 1:4078198/1‑150 (MQ=255) tGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAgg < 1:4488624/150‑1 (MQ=255) ccGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCgg > 1:3519318/1‑150 (MQ=255) ccGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTccc < 2:3031799/150‑1 (MQ=255) cGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTcccc > 2:3794132/1‑150 (MQ=255) gAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGACCTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCa > 2:1731975/1‑150 (MQ=255) aGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCaa > 2:1137578/1‑150 (MQ=255) aaacgcaaaaaaGCAGCCCGAAGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATaccaccaa > 1:2608694/7‑150 (MQ=255) gCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATaccaccaac < 1:322251/150‑1 (MQ=255) gCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATaccaccaac < 1:2617695/150‑1 (MQ=255) gagaAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATaccaccaacca > 1:721027/1‑150 (MQ=255) gagaAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATaccaccaacca > 1:704803/1‑150 (MQ=255) gcaaaaaaGCAGCCCGAAGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATaccaccaaccac > 1:3306233/3‑150 (MQ=255) agaAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATaccaccaaccac > 1:1592740/1‑150 (MQ=255) aaaaaGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATACCACCcaccaccac > 2:3267419/1‑150 (MQ=255) aaaaaGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATACCACCAACcaccac < 2:654660/150‑1 (MQ=255) aaaaaGCAGCCCGAAGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATACCACCAACcaccac > 1:4829161/1‑150 (MQ=255) aaaaGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATACCACCAACCACcaca > 2:4166367/1‑150 (MQ=255) aaaaGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATACCACCAACCACcaca > 1:2772966/1‑150 (MQ=255) aaaGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATACCACCAACCACCacaa > 1:4240113/1‑150 (MQ=255) aaaGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATACCACCAACCACCacaa > 1:4240148/1‑150 (MQ=255) aaGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATACCACCAACCACCacaac > 2:3897926/1‑150 (MQ=255) agcagcCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGAGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATACCACCAACCACCacaaca > 2:4532784/1‑150 (MQ=255) gcagcCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATACCACCAACCACCACAacac > 2:2031593/1‑150 (MQ=255) cTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATACCACCAACCACCACAACACCCTGt > 1:412772/1‑150 (MQ=255) cTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATACCACCAACCACCACAACACCCTGt > 2:960624/1‑150 (MQ=255) | CCTGGCCGTGAAACGTCGTGGTGACGTGCGTAAAGCCAAGCTGTACTACCTGCGCGACCTGTCCGGCAAAGCCGCTCGCATCAAGGAAAAACTGTCCTGAGTGCAGTTTGCCCGGTGGCCGAGGCCGCCTAGCGAGAAAAAAGCAGCCTTCGGGCTGCTTTTTTGCGTTTTGAAACCCCGAAAATGTGATTGCCATGACGACCCGAGACCAGGAAATCCAGCGCCGCACCGAACTGTCGGTGACCCGCGTTACCAAGGCGGTGTTCCCCAATACCACCAACCACCACAACACCCTGT > NC_002947/1670520‑1670816 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |