Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,704,679 T→A 7.2% M1* (TTG→TAG) †‡ PP_1499 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,704,6790TA 7.2% 385.3 / 17.7 140M1* (TTG→TAG) †‡PP_1499hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (63/61);  new base A (4/6);  total (68/72)
Fisher's exact test for biased strand distribution p-value = 7.44e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.00e-01

Only 100 of 145 total aligned reads displayed.

CCGGAGGACAACGGCGACGGCGTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTGGGACGACAAC  >  NC_002947/1704530‑1704827
                                                                                                                                                     |                                                                                                                                                    
ccGGAGGACAACGGCGACGGCGTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCTGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCtt                                                                                                                                                      <  1:518683/150‑1 (MQ=255)
ccGGAGGACAACGGCGACGGCGTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCCACCTGGACGACCCGGCCAACTCTGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCtt                                                                                                                                                      <  1:518980/150‑1 (MQ=255)
    aggaCAACGGCGACGGCGTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGccc                                                                                                                                                  <  2:2628364/150‑1 (MQ=255)
      gaCAACGGCGACGGCGTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCcgc                                                                                                                                                <  1:4121629/150‑1 (MQ=255)
      gaCAACGGCGACGGCGTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCGTGCCcgc                                                                                                                                                >  2:672178/1‑150 (MQ=255)
      gaCAACGGCGACGGCGTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCAAGCCcgc                                                                                                                                                <  2:2007366/150‑1 (MQ=255)
         aaCGGCGACGGCGTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGTGCAAATGACCGTGTTGGCGTCTTCGCGGGCAAGCCCGCGaa                                                                                                                                             <  2:1607166/150‑1 (MQ=255)
         aaCGGCGACGGCGTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGaa                                                                                                                                             >  2:63955/1‑150 (MQ=255)
         aaCGGCGACGGCGTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCAAGCCCGCGaa                                                                                                                                             <  1:5009090/150‑1 (MQ=255)
         aaCGGCGACGGCGTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCAAGCCCGCGaa                                                                                                                                             <  2:2792538/150‑1 (MQ=255)
         aaCGGCGACGGCGTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCATGTTGGCGTCTTCGCGGGCTTGCCCGCGaa                                                                                                                                             >  2:2079598/1‑150 (MQ=255)
           cggcgacggcgTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAaga                                                                                                                                           <  1:3313595/150‑1 (MQ=255)
           cggcgacggcgTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCAAGCCCGCGAaga                                                                                                                                           <  2:3229429/150‑1 (MQ=255)
            ggcgacggcgTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCCTCTTCGCGGGCAAGCCCGCGAagac                                                                                                                                          <  1:1544608/150‑2 (MQ=255)
                      tGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTTTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAg                                                                                                                                <  2:4848182/150‑1 (MQ=255)
                      tGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTCCAg                                                                                                                                >  1:4356526/1‑150 (MQ=255)
                           aTCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTGGCGGGGTTGGCCGCGAAGAGGGCGGTACGGGtttg                                                                                                                           >  1:1793930/1‑149 (MQ=255)
                           aTCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTGGCGGGCGTGGCCGCGAAGAGGCCGGTACAGGtttg                                                                                                                           >  1:1793937/1‑149 (MQ=255)
                           aTCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTc                                                                                                                           >  2:1229519/1‑150 (MQ=255)
                            tCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGGCGAGGCCGGTACAGGGTTCg                                                                                                                          >  2:498222/1‑150 (MQ=255)
                            tCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTCCAGGTTTCg                                                                                                                          >  2:4170918/1‑150 (MQ=255)
                             cGACAGCCCGGCGGCGCGGGTGCGGGCCTACCGGGACGACCCGGCCAACTCCGACCTGTCCGACGATGTGGGGCGGTTCCCGCGCTCGGGCAAAGGACCGTGTGGGGGTCTTCGCGGGCTTGCCGGCGAAGAGGCCGGTACAGGTTTCgt                                                                                                                         <  1:3615302/150‑1 (MQ=255)
                                cAGCCGGGCGGCGCGGGTGCTGGCCTCCCGGGACGACCCGGCCAACTCCGACCTGTGCGTCGACGTGGCGCGGTTCCCGCGCTCGGGCAAATGACGGTGTTGGCGTCTTCGGGGGCTGGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTa                                                                                                                      <  1:4404226/150‑1 (MQ=255)
                                 aGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCACCTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTAc                                                                                                                     <  2:932054/150‑1 (MQ=255)
                                  gCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACt                                                                                                                    >  2:4090710/1‑150 (MQ=255)
                                   cccGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTa                                                                                                                   >  1:1618344/1‑150 (MQ=255)
                                   cccGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTa                                                                                                                   >  2:166145/1‑150 (MQ=255)
                                   cccGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCCGTACAGGTTTCGTGTACTa                                                                                                                   >  1:1956192/1‑150 (MQ=255)
                                     cggcggCGCGGGTGCTGGCCTACCTGGTCGACCCGGCCAACTCCGACCTGTTCGTCGACGTGGCGCGGTTCCAGCGCTCGGGCAATTGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGACGAGGCCGGTACCCGGTTAGTGTACTAGa                                                                                                                 >  1:1770499/1‑150 (MQ=255)
                                          gcggGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGACGTGGCGCGGTTCCAGCGCTCGGGCAATTGACCGTTTTGGCGTCTTCGCGGGCTTGCCCGCTAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGa                                                                                                            <  1:1958828/150‑1 (MQ=255)
                                          gcggGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGa                                                                                                            <  1:3777927/150‑1 (MQ=255)
                                          gcgcGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGa                                                                                                            <  2:3523625/150‑1 (MQ=255)
                                            gcgGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGt                                                                                                          <  1:3780639/150‑1 (MQ=255)
                                                gTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTccc                                                                                                      >  1:3733447/1‑150 (MQ=255)
                                                   ccccccTACCCGGACCCCCCGGCCACCCCCGACCCCGTCGTCGAAGTGGCGCGGGTCCAGCGCTCGGGCAACTGACCGTGTTGGCGTCTTCGCGGCCTTGCCCGCGCAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGt                                                                                                   <  2:5093057/146‑1 (MQ=255)
                                                   cTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAAGGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGt                                                                                                   <  2:2565131/150‑1 (MQ=255)
                                                    tGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTg                                                                                                  >  2:4315049/1‑150 (MQ=255)
                                                       ccTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGGGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGAc                                                                                               <  1:1187700/150‑1 (MQ=255)
                                                        cTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACg                                                                                              >  2:5003067/1‑150 (MQ=255)
                                                        cTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACg                                                                                              >  2:5003102/1‑150 (MQ=255)
                                                        cTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCGTGCCCGCGCAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACg                                                                                              >  2:1756533/1‑150 (MQ=255)
                                                        cTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTAGCGGGCTTGCCCCCGAAGAGGCCGGTACAGGTTTGGTGTTCTAGAAATGAGTTACCGGTGGACg                                                                                              >  1:1023105/1‑150 (MQ=255)
                                                         tACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTGGCGGGCTTTCCCGCGAAGAGGCCGGTAAATGTTTCGTGTAATATAAAGGATTTGCCGGTGGACGa                                                                                             >  2:898553/1‑150 (MQ=255)
                                                          aCCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGGAAGGAGTTCCCGGTGGACGaa                                                                                            >  2:4233655/1‑150 (MQ=255)
                                                            cTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATa                                                                                          <  1:3796164/150‑1 (MQ=255)
                                                            cTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTGGCCCGCGAAGAGGCCGGGACAGGTTTCGTGTACGAGAAAGGAGTTGCCGGGGGGCGCATa                                                                                          >  1:1511749/1‑150 (MQ=255)
                                                             tGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGGGTACTAGAAAGGAGTTCCCGGTGGACGAATAc                                                                                         >  2:631069/1‑150 (MQ=255)
                                                              ggACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATAcc                                                                                        <  2:2276946/150‑1 (MQ=255)
                                                               gacgacCCGGCCAACCCCGACCTGTTCGTCGACGTGGCGGGGTCCCCGCGCTCGGGCAACGGACCGTGTGGGCGACTCCGCGGGCTGGCCCGCGACGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCa                                                                                       <  1:871427/150‑1 (MQ=255)
                                                                acgccCCGGCCACCCCCGACCTGTTCGTCGACGGGGCGCGGTTCCAGCGCTCGGGCAAATGCCGGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAg                                                                                      <  1:4472331/150‑1 (MQ=39)
                                                                     ccGGCCAACTCCGACCTGTTCGTCGACGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAAc                                                                                 <  2:487593/150‑1 (MQ=255)
                                                                     ccGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAAc                                                                                 >  1:4693719/1‑150 (MQ=255)
                                                                     ccGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCGTGCCCGCGCACAGGCCGGTCCAGGTTTCGGGTTCGAGAAAGGAGTTCCCGGGGGACGAATACCACCAAAc                                                                                 >  1:3951253/1‑150 (MQ=255)
                                                                         ccAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATc                                                                             <  2:3021549/150‑1 (MQ=255)
                                                                          cAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATcc                                                                            <  2:388432/150‑1 (MQ=255)
                                                                          cAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATcc                                                                            <  2:3828853/150‑1 (MQ=255)
                                                                          cAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCCCGGGCGTGCCCCCGCCGGGGCCCGGACAGGTTTCGGGTGCACGAAAGGCGGTGCCCGGGGCCGCAAACCAGCAAAcccacc                                                                            >  1:3036533/1‑146 (MQ=255)
                                                                           aaCTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGGTTGCCCGCGAAGTGGCCGGTACAGGTTTGGTGTAGTAGAAAGGTGTTAGCGGTGGTCGAATTCCAGCAAACCATGcg                                                                           >  2:3151014/1‑150 (MQ=255)
                                                                              tCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCgcgc                                                                        >  2:2030302/1‑150 (MQ=255)
                                                                              tCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCgcgc                                                                        >  2:3159389/1‑150 (MQ=255)
                                                                              tCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCCGTGGACGAATACCAGCAAACCATCCgcgc                                                                        >  1:2952238/1‑150 (MQ=255)
                                                                                ctaCCTGTTCGTCGATGTGGGGCGGTTCCTGGGCTGGGGAAAATGACGGTTTTGGCTTCTTCGGGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGccc                                                                      <  1:1027145/148‑1 (MQ=255)
                                                                                    cTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCCGGCTTGCCCGCGAAGAGGCCCGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCAACCCCGCCCAGTc                                                                  >  2:1301970/1‑150 (MQ=255)
                                                                                    cTGGTCGTCGATGTGGCGCGGTTCCAGCGCTCGGGCAACTGACCGTGTTGGCGTCTCCGCGGGCTGGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTc                                                                  <  1:867940/150‑1 (MQ=255)
                                                                                        gcgtcgAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGAc                                                              <  2:213941/149‑1 (MQ=255)
                                                                                             gAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTGTCGTGTACTCGCAAGGAGTTCCCGGGGGACGAATACCAGCCAACCCTCCGCGCCCGGTCCGACCGcct                                                         >  2:3584347/1‑148 (MQ=38)
                                                                                                 tGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCAtcgtc                                                     <  1:3959406/150‑1 (MQ=255)
                                                                                                 tGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCAtcgtc                                                     <  1:4083268/150‑1 (MQ=255)
                                                                                                   gcgcGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTcgc                                                   <  1:1655228/150‑1 (MQ=255)
                                                                                                     gcgGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCgg                                                 <  1:3805037/150‑1 (MQ=255)
                                                                                                         ttCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGGGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGcaca                                             >  2:4367990/1‑150 (MQ=255)
                                                                                                             aGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTAGTGTACTAGAAAGGAGTTACCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACACACg                                         >  2:4829074/1‑150 (MQ=255)
                                                                                                              gcgcTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGc                                        <  2:361947/150‑1 (MQ=255)
                                                                                                                gcTCGGGCAAATGACCGTGTTGGCGTCTTGGCGGGCTTTGCCGCGAAGAGGGCGGTACAGGTTTGGTGTACTAGAAAGGATTTGCCGGTGGACGAATTACAGCAAACCATGCGGGCCCTGTCCGTACGCATCGTCGCGGCACAGACGCCg                                      >  2:3525869/1‑150 (MQ=255)
                                                                                                                gcTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCCAACCCTCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCg                                      >  2:1361293/1‑150 (MQ=255)
                                                                                                                    gggCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATcc                                  <  1:1953318/150‑1 (MQ=255)
                                                                                                                    gggCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATcc                                  <  1:4858121/150‑1 (MQ=255)
                                                                                                                     ggCAAATGACCGTGTTGGCGTCTTCGCGGGCATGCCCGCGAAGAGGCCCGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCCAACCATCCGCGCCCGGTCCCACCCCATCGTCGCGGCACAGACGCCGATCCg                                 >  2:42028/1‑150 (MQ=255)
                                                                                                                       cAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCCCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCACCAAACCAACCGCGCCCTGTCCGACCCCATCGTCGCGGCACAGACGCCCGTCCggg                               >  1:2011267/1‑150 (MQ=255)
                                                                                                                        aaaTGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGt                              >  2:412833/1‑150 (MQ=255)
                                                                                                                            gACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGCAAGGAGTTCCCCGTGGACGAATACCAGCAAACCAACCGCGCCCGGTCCCACCGCAACCTCGCGGCACAGACGCCGATCCCGGTCCtt                          >  1:3298206/1‑150 (MQ=38)
                                                                                                                                    tGGCGTCTTGGCGGGCTTGCCCGCTATGAGGCCGGTACAGGTTTCGTGTACTAGATAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGt                  <  1:3266893/150‑1 (MQ=255)
                                                                                                                                      gcctCTTCGCGGGCAAGCCCGCGAAGACGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGa                >  2:2364428/4‑150 (MQ=255)
                                                                                                                                      gCGTCCTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTACGTGTACTAGACAGGAGTTCCCGGTGGACGACTACCAGCAAACCATCCGCGCCCGGTCCGACCGCATCGTCGCGGCACGGACGCCGATCCGGGCCCTTGACGCGGTgt                <  2:1770499/150‑2 (MQ=255)
                                                                                                                                        gTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAg              <  2:913122/150‑1 (MQ=255)
                                                                                                                                        gTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAg              >  2:2831665/1‑150 (MQ=255)
                                                                                                                                         tCTTCGCGGGGTTGCCCGCTAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGt             <  1:1825669/150‑1 (MQ=255)
                                                                                                                                          cTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTg            <  2:1394895/150‑1 (MQ=255)
                                                                                                                                          cTTCGCGGGCAAGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTg            >  2:1590779/1‑150 (MQ=255)
                                                                                                                                           ttCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTgg           <  1:1779155/150‑1 (MQ=255)
                                                                                                                                           ttCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTgg           <  1:2650953/150‑1 (MQ=255)
                                                                                                                                           ttCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTgg           <  1:2079598/150‑1 (MQ=255)
                                                                                                                                            tCGCGGGCAAGCCCGCGAAGACGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTggg          >  2:2302175/1‑150 (MQ=255)
                                                                                                                                             cgcgGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTGGga         <  2:5087434/150‑1 (MQ=255)
                                                                                                                                             cgcgGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTGGga         <  1:4170800/150‑1 (MQ=255)
                                                                                                                                             cgcgGGCGTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTGGga         <  2:5087268/150‑1 (MQ=255)
                                                                                                                                                 ggCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTGGgacgac     <  2:2623775/150‑1 (MQ=255)
                                                                                                                                                  gCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTGGGACGaca    >  2:2382188/1‑150 (MQ=255)
                                                                                                                                                    ttGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTGGGACGacaac  >  2:2936047/1‑150 (MQ=255)
                                                                                                                                                    ttGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTGGGACGacaac  >  1:4507920/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
CCGGAGGACAACGGCGACGGCGTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTGGGACGACAAC  >  NC_002947/1704530‑1704827

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑