| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,889,400 | C→A | 5.4% | L305L (CTG→CTT) ‡ | PP_1695 ← | sodium‑solute symporter/two‑component system sensor histidine kinase/response regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,889,400 | 0 | C | A | 5.4% | 525.6 / 11.8 | 157 | L305L (CTG→CTT) ‡ | PP_1695 | sodium‑solute symporter/two‑component system sensor histidine kinase/response regulator |
| Reads supporting (aligned to +/- strand): ref base C (84/64); new base A (6/3); total (90/67) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.34e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 177 total aligned reads displayed.
CCATGGTCGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGGGCAGGCAGATGATTGC > NC_002947/1889252‑1889549 | cATGGTCGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGgcagcag > 1:4115798/1‑150 (MQ=255) cATGGTCGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGgcagcag > 2:22547/1‑150 (MQ=255) cATGGTCGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGgcagcag > 1:600163/1‑150 (MQ=255) aTGGTCGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGgcagcagc < 2:349451/150‑1 (MQ=255) ggTCGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCAt > 2:4238922/1‑150 (MQ=255) gTCGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATc > 1:990318/1‑150 (MQ=255) cGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTg < 1:5001713/150‑1 (MQ=255) cAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCCGCATCTGccc > 2:2981269/1‑150 (MQ=255) cAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGccc < 2:1540865/150‑1 (MQ=255) cAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGccc > 2:2276831/1‑150 (MQ=255) aaCGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCg < 2:4183417/150‑1 (MQ=255) aaCGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGGGCCGGGCAGATGCTGCTGCCCg < 1:2438188/150‑1 (MQ=255) cGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGGGCCAGGCAGATGCTGCTGCCCGGc < 2:1073693/150‑1 (MQ=255) cACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAg < 2:1394749/150‑1 (MQ=255) aCGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAgg < 1:1699448/150‑1 (MQ=255) aCGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAgg > 2:4715679/1‑150 (MQ=255) aCGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAgg < 2:2109078/150‑1 (MQ=255) cTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAAt < 1:2581048/150‑1 (MQ=255) tCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATc > 1:638196/1‑150 (MQ=255) tCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATc > 2:1040324/1‑150 (MQ=255) tCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATc > 2:3263318/1‑150 (MQ=255) tCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATc > 2:698818/1‑150 (MQ=255) tCGACGATCACCATGCCGGTAGCCGCAGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATc > 2:2162044/1‑150 (MQ=255) gaTCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACACCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGcac > 1:4128942/1‑150 (MQ=255) cATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGaa < 2:3872047/150‑1 (MQ=255) cATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGaa < 1:151776/150‑1 (MQ=255) cATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGaa < 1:151774/150‑1 (MQ=255) ggTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAgcgc < 2:1159851/150‑1 (MQ=255) gTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGcgcg < 2:1746278/150‑1 (MQ=255) GCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGt < 2:4091104‑M1/150‑1 (MQ=255) GCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGt > 1:222911‑M1/1‑150 (MQ=255) GCCGAGGCACCGCCGATCAACGCCAGCAGGGCAAGGAGCGGGTCCGACTCGGCCAGGGGCAGGCTGATGACGACCGAGTCGGAGATCACCGTGCCGGGCAGCAGCAGCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGt < 2:3090059‑M1/150‑1 (MQ=255) cgaggcgcacccgagccttgccctgctggcgttcatcggcggtgcctcggcCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGc > 2:2842375‑M2/52‑150 (MQ=255) AGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCa > 1:930089‑M1/1‑150 (MQ=255) cgccgATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACa > 1:1666581/1‑150 (MQ=255) cgccgATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACa > 2:4146796/1‑150 (MQ=255) cgccgATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACa > 2:1250495/1‑150 (MQ=255) gccgATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACAt > 1:2683087/1‑150 (MQ=255) gccgATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACAt > 1:419888/1‑150 (MQ=255) gATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCgg < 1:4603992/150‑1 (MQ=255) gATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCgg > 2:235933/1‑150 (MQ=255) gATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCgg > 2:160373/1‑150 (MQ=255) tGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGa < 2:1854361/150‑1 (MQ=255) gAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGaa > 1:1386791/1‑150 (MQ=255) gAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGaa > 2:4048652/1‑150 (MQ=255) ccAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATAccc < 1:4146796/150‑1 (MQ=255) gggCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAgcgcg < 2:697952/150‑1 (MQ=255) gggCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAgcgcg < 2:2863997/150‑1 (MQ=255) gCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTTCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGcc < 1:1721527/150‑1 (MQ=255) cAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCa > 2:911556/1‑150 (MQ=255) aaGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGTCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAg > 1:3218652/1‑150 (MQ=255) aaGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAg > 2:2003899/1‑150 (MQ=255) ggCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGgc < 1:465939/150‑1 (MQ=255) cTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGgcgc < 1:698818/150‑1 (MQ=255) cTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGgcgc < 1:3263318/150‑1 (MQ=255) tCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCa > 1:1001634/1‑150 (MQ=255) ggTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGt > 1:822035/1‑150 (MQ=255) gcgcCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCt > 1:2823363/1‑150 (MQ=255) gcgcCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCt < 2:1695323/150‑1 (MQ=255) gcctcggcCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGc > 2:4413136‑M2/9‑150 (MQ=255) cctcggcCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCg < 1:1263518‑M2/143‑1 (MQ=255) cctcggcCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCg > 1:4222240‑M2/8‑150 (MQ=255) ctcggcCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCgg > 1:3666698‑M2/7‑150 (MQ=255) ctcggcCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCgg > 1:439944‑M2/7‑150 (MQ=255) tcggcCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGt > 2:1677056‑M2/6‑150 (MQ=255) tcggcCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGt > 1:2098820‑M2/6‑150 (MQ=255) cggcCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGtt > 1:3723624‑M2/5‑150 (MQ=255) gcCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCg > 1:3046875‑M2/3‑150 (MQ=255) cCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGa < 1:4330861‑M2/149‑1 (MQ=255) cAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGAt < 1:4091104/150‑1 (MQ=255) aGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATg < 2:4032419/150‑1 (MQ=255) aGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATg < 2:3895106/150‑1 (MQ=255) aGGGGCAGGCTGATGACGAAAGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCTGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCATGTCCTGCGGTTCGATg < 2:1452461/150‑1 (MQ=255) gggCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGtt > 1:4431522/1‑150 (MQ=255) ggCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTtc < 2:231765/150‑1 (MQ=255) cAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTtctc < 1:160373/150‑1 (MQ=255) gaacgaGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCACGTCCTGCGGTTCGATGGTCTCCACCACGGTAAc > 2:4507491/1‑150 (MQ=255) gaacgaGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACg < 1:4936499/145‑1 (MQ=255) gaacgaGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACg > 2:4936499/1‑145 (MQ=255) gaacgaGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAAc > 2:3822020/1‑150 (MQ=255) gaacgaGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAAc > 1:2676662/1‑150 (MQ=255) cgaGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTg < 1:872631/150‑1 (MQ=255) aGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGa > 2:2707142/1‑150 (MQ=255) tggggAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGaa < 1:4411830/147‑1 (MQ=255) gTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGaa < 1:2784932/150‑1 (MQ=255) gagaTCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGt > 2:1319704/1‑150 (MQ=255) gaTCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCg < 2:937965/150‑1 (MQ=255) cctggCCGGGCAGATGCTGCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGACTACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGGTCTCCACCACGGTAACGTGGAACTGTCGGggca > 2:672792/5‑150 (MQ=255) tggCCGGGCAGATGCTGCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGggcagg > 2:4252368/3‑150 (MQ=255) gTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGggcagg > 1:1058859/1‑150 (MQ=255) cGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGGGCAGGCAga > 1:4286255/1‑150 (MQ=255) cGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGGGCAGGCAga > 1:3085469/1‑150 (MQ=255) cGGGCAGATGCTGCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGGGCAGGCAga > 2:4840952/1‑150 (MQ=255) gggCAGCAGCATCTGCCTGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGGGCAGGCAgat > 1:4752202/1‑150 (MQ=255) cagcagcaTCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTGACGTGGAACTGTCGGGGCAGGCAgatgat > 1:2737544/1‑150 (MQ=255) agcagcaTCTGCCTGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGGGCAGGCAGATGAtt < 2:990318/150‑1 (MQ=255) agcagcaTCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGGGCAGGCAGATGAtt < 2:35752/150‑1 (MQ=255) agcagcaTCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGGGCAGGCAGATGAtt < 2:268767/150‑1 (MQ=255) agcagcaTCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGGGCAGGCAGATGAtt < 2:1616766/150‑1 (MQ=255) gcagcaTCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGGGCAGGCAGATGATTg < 2:4115798/150‑1 (MQ=255) | CCATGGTCGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGGGCAGGCAGATGATTGC > NC_002947/1889252‑1889549 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |