| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,981,203 | T→C | 5.1% | intergenic (+99/‑201) | rpsA → / → ihfB | 30S ribosomal protein S1/integration host factor subunit beta |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,981,203 | 0 | T | C | 5.1% | 494.3 / 9.8 | 157 | intergenic (+99/‑201) | rpsA/ihfB | 30S ribosomal protein S1/integration host factor subunit beta |
| Reads supporting (aligned to +/- strand): ref base T (91/56); new base C (4/4); total (97/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.12e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.45e-01 | |||||||||||
Only 100 of 162 total aligned reads displayed.
ACCACCATGGCTGCGCTGCTGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGAATTTTTTTATTAAGTCAAGATCCACCCTGTTCAAATCCTTCCCGGCGTG > NC_002947/1981057‑1981352 | accaTGGCTGCGCTGCTGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGc < 2:1310435/150‑1 (MQ=255) caTGGCTGCGCTGCTGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTg < 1:639392/150‑1 (MQ=255) caTGGCTGCGCTGCTGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTg > 1:312444/1‑150 (MQ=255) tGGCTGCGCTGCTGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGc < 1:2450681/150‑1 (MQ=255) ggCTGCGCTGCTGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAATGGGCGACCCTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCCCTGCTGGAACACGCCAGCTTCAGGCTGGCg > 1:3660721/1‑150 (MQ=255) tgcgctgcTGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAg > 2:2938390/1‑150 (MQ=255) tgcgctgcTGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAg > 1:3590425/1‑150 (MQ=255) cgctgcTGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCCTTTTTTTTGCGCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCCTGAAGCTGGCgtgttc < 2:3451648/150‑6 (MQ=255) gctgctGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGccc > 2:98307/1‑150 (MQ=255) gctgctGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGccc > 2:4121866/1‑150 (MQ=255) gctgcGCTAAGCAATGGCCAAGCAGAACTGAGTTCTTTTTTATCGTTAAAATGGGCGACCCTCGGGTCGCCATTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGtt < 1:1271747/150‑1 (MQ=255) gcgcGACGCATTGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTa < 1:3559650/150‑1 (MQ=255) tGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTc > 1:4973402/1‑150 (MQ=255) gCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCAc > 1:4313766/1‑150 (MQ=255) gCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCAc > 1:4308445/1‑150 (MQ=255) gCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCAc > 1:4058359/1‑150 (MQ=255) cAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCggg > 1:2061229/1‑143 (MQ=255) cAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCAccc > 2:625814/1‑150 (MQ=255) aGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCcgc < 1:953978/150‑1 (MQ=255) cgAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGaa < 2:3410169/149‑1 (MQ=255) aGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGaa < 1:3896066/150‑1 (MQ=255) cTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAg < 1:1384512/150‑1 (MQ=255) aGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGGTGTAGGAGCGGGTTCACCCGCGAAGCAGgcg > 1:2788869/1‑150 (MQ=255) gTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGgcgc < 2:4406249/150‑1 (MQ=255) cTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCAc > 2:2167868/1‑150 (MQ=255) tGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACt < 2:3476279/150‑1 (MQ=255) tttGATCGGTAAAAAGGGCGACCCTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTga > 1:1482715/1‑149 (MQ=255) tttGATCGGTAAAAAGGGCGACCCTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCCTGAAGCTg < 2:3574055/101‑1 (MQ=255) ttGATCGGTAAAAAGGGCGACCCTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGc < 2:142109/150‑1 (MQ=255) ttGATCGGTAAAAAGGGCGACCCTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGc < 1:3617568/150‑1 (MQ=255) gATCGGTAAAAAGGGCGACCCTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCt > 2:1319597/1‑150 (MQ=255) gATCGGTAAAAAGGGCGACCCTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCt < 1:578071/150‑1 (MQ=255) aaaaGGGCGACCCTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGc < 1:3760760/150‑1 (MQ=255) aaaaGGGCGACCCGAGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGATGCAGGCGCCACTGGCCTATCTAAGc > 2:2325709/1‑150 (MQ=255) aaaGGGCGACCCTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCg > 1:2674386/1‑150 (MQ=255) aaaGGGCGACCCGAGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCg > 1:3742410/1‑150 (MQ=255) aaGGGCGACCCTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCgg > 1:390967/1‑150 (MQ=255) aaGGGCGACCCTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCgg < 1:2317908/150‑1 (MQ=255) aGGGCGACCCTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGt > 1:1021297/1‑150 (MQ=255) aGGGCGACCCTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGt > 2:671179/1‑150 (MQ=255) aGGGCGACCCTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGt > 1:1021429/1‑150 (MQ=255) gggCGACCCGAGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTa > 1:3878747/1‑150 (MQ=255) ggCGACCCTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAg > 2:3276205/1‑150 (MQ=255) gCGACCCTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGa < 2:634578/150‑1 (MQ=255) gCGACCCTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGa > 2:3205887/1‑150 (MQ=255) gCGACCCTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGa < 2:1516168/150‑1 (MQ=255) gCGACCCTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGa < 1:982154/150‑1 (MQ=255) cGACCCTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGAc > 2:4377622/1‑150 (MQ=255) gACCCTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGAcc > 2:215561/1‑150 (MQ=255) gACCCTCGGGTCGCCCTTTTTTTTGCTCCCCGACCAGGTGGTTCGGCCGATTGCAATGCATGAACACCCCAGCGTAAGGCTGGCGAAACCCGTTGTAGGAGCGGGTTAAACCCCCAAGCAAGCGCCACAGGCCAATAAAAGCGGTAGAca > 1:2178740/1‑149 (MQ=255) ccTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTaa < 2:475002/137‑1 (MQ=255) ccTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTaa > 1:475002/1‑137 (MQ=255) ccTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCAtt > 1:1794017/1‑150 (MQ=255) ccTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCAtt > 1:1793891/1‑150 (MQ=255) tCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCt > 2:207618/1‑150 (MQ=255) gagggTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTCAGCGGTAGACCATTCt > 2:1121788/3‑150 (MQ=255) gagggTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCt > 2:1985366/3‑150 (MQ=255) gagggTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCt > 2:1985594/3‑150 (MQ=255) gagggTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCt > 1:4571079/3‑150 (MQ=255) cGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCtt < 1:1191914/150‑1 (MQ=255) ggTCGCCCCTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCCaacg > 1:3148711/1‑79 (MQ=255) ggTCGCCCCTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCCaacg < 2:3148711/81‑3 (MQ=255) gTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGaa < 2:4983669/150‑1 (MQ=255) gTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGaa < 2:278921/150‑1 (MQ=255) tCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAAt < 1:4413780/150‑1 (MQ=255) tCGCCATTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAAt < 1:4413800/150‑1 (MQ=255) cGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAAtt < 1:3829225/150‑1 (MQ=255) gCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTa > 1:3080510/1‑150 (MQ=255) cccTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGGACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTAc > 2:4710581/1‑150 (MQ=255) cTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACtt < 2:2257959/150‑1 (MQ=255) cTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACtt < 1:2186743/150‑1 (MQ=255) cTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACtg > 2:2561650/1‑149 (MQ=255) ttttttttGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTc > 1:2301685/1‑150 (MQ=255) ttttttttGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTc > 1:4683828/1‑150 (MQ=255) ttttttGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTACTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCaa > 1:1355466/1‑150 (MQ=255) ttGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTTGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCtt < 1:2819475/150‑1 (MQ=255) cTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGaa > 2:3156826/1‑150 (MQ=255) tCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGAAt > 2:674834/1‑150 (MQ=255) aCCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGAAttttttt < 2:596812/150‑1 (MQ=255) ccAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCGCCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGAATTTTTtta < 2:4352182/150‑1 (MQ=255) ccAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGAATTTTTtta < 2:4352187/150‑1 (MQ=255) gtggtgCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGAATTTTTTTATTaa < 1:5004895/150‑1 (MQ=255) gtggtgCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGAATTTTTTTATTaa < 1:1437509/150‑1 (MQ=255) ggtgCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGAATTTTTTTATTAAGt < 1:2540341/150‑1 (MQ=255) gtgCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGAATTTTTTTATTAAGTc > 1:763515/1‑150 (MQ=255) tgCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGAATTTTTTTATTAAGTCa > 1:2539074/1‑150 (MQ=255) cggcggATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGAATTTTTTTATTAAGTCAAg > 1:3448693/1‑150 (MQ=255) ggcggATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCTCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGAATTTTTTTATTAAGTCAAGa < 1:357888/150‑1 (MQ=255) aTGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGAATTTTTTTATTAAGTCAAGATCCAc < 2:4313766/150‑1 (MQ=255) cACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGAATTTTTTTATTAAGTCAAGATCCACCCTg > 2:1583864/1‑150 (MQ=255) ctgctgGTACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGAATTTTTTTATTAAGTCAAGATCCACCCTGtt < 2:4973402/150‑1 (MQ=255) gctgGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGTATTACTTCAATCTTGAATTTTTTTATTATGTCAATATGCACCCTGTTCa > 2:4816413/1‑150 (MQ=255) tgGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGAATTTTTTTATTAAGTCAAGATCCACCCTGTTCaaa > 2:2688855/1‑150 (MQ=255) cttcGCCAGCCTGAAGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGAATTTTTTTATTAAGTCAAGATCCACCCTGTTCAAATCCt > 1:170074/4‑150 (MQ=255) ttcGCCAGCCTGAAGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGAATTTTTTTATTAAGTCAAGATCCACCCTGTTCAAATCCtt > 2:4672784/3‑150 (MQ=255) ccAGCCTGAAGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGAATTTTTTTATTAAGTCAAGATCCACCCTGTTCAAATCCTTCCCg > 1:4204789/1‑150 (MQ=255) aGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGAATTTTTTTATTAAGTCAAGATCCACCCTGTTCAAATCCTTCCCGGc < 2:312444/150‑1 (MQ=255) aGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGAATTTTTTTATTAAGTCAAGATCCACCCTGTTCAAATCCTTCCCGGc > 2:3044412/1‑150 (MQ=255) ttCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGAATTTTTTTATTAAGTCAAGATCCACCCTGTTCAAATCCTTCCCGGCGTg > 1:1292035/1‑150 (MQ=255) ttCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGAATTTTTTTATTAAGTCAAGATCCACCCTGTTCAAATCCTTCACGGCGTg > 2:4070428/1‑150 (MQ=255) | ACCACCATGGCTGCGCTGCTGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCCTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGAATTTTTTTATTAAGTCAAGATCCACCCTGTTCAAATCCTTCCCGGCGTG > NC_002947/1981057‑1981352 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |