| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,089,298 | C→G | 6.3% | intergenic (+146/+772) | PP_1865 → / ← aroH | transposase/3‑deoxy‑7‑phosphoheptulonate synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,089,298 | 0 | C | G | 6.3% | 393.4 / 13.4 | 127 | intergenic (+146/+772) | PP_1865/aroH | transposase/3‑deoxy‑7‑phosphoheptulonate synthase |
| Reads supporting (aligned to +/- strand): ref base C (58/61); new base G (4/4); total (62/65) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.13e-01 | |||||||||||
Only 100 of 135 total aligned reads displayed.
TTGAAAGGGATGGCCCTTACGGCGGGTCCCTTTTTGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGAAGCGAATTCGGTGATCG > NC_002947/2089149‑2089446 | aGGGATGGCCCTTACGGCGGGTCCCTTTTTGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATgg < 2:3908562/150‑1 (MQ=255) gggATGGCCCTTACGGCGGGTCCCTTTTTGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATggg < 1:518921/150‑1 (MQ=255) gATGGCCCTTACGGCGGGTCCCTTTTTGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGc < 1:4531901/150‑1 (MQ=255) gATGGCCCTTACGGCGGGTCCCTTTTTGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGc < 1:1608646/150‑1 (MQ=255) gATGGCCCTTACGGCGGGTCCCTTTTTGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCGTGCTCCCGGGCGCACGCGCGGCAGGCCCCCTCCATGGGGc > 2:2436680/1‑150 (MQ=255) aTGGCCCTTACGGCGGGTCCCTTTTTGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGcc < 1:687595/150‑1 (MQ=255) aTGGCCCTTACGGCGGGTCCCTTTTTGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCCGCCGTGCTCCCCGGAGCACGCGCTGCAGGCCCCCGCCATGGGGcc > 2:263801/1‑150 (MQ=17) gCCCTTACGGCGGGTCCCTTTTTGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCa < 2:5071203/150‑1 (MQ=255) cccTTACGGCGGGTCCCTTTTTGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGTGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCAATGGATGGGGCCtgca < 1:2741134/150‑4 (MQ=14) ccTTACGGCGGGTCCCTTTTTGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGGTACCGGGAGCACGCGCTTCAGGCCCCATCCATGGGGCCTCAgc > 2:1456691/1‑150 (MQ=255) ccTTACGGCGGGTCCCTTTTTGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAgc < 1:3804804/150‑1 (MQ=255) ccTTACGGCGGGTCCCTTTTTGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAgc > 1:4149738/1‑150 (MQ=255) ccTTACGGCGGGTCCCTTTTTGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCGCCGGCCTTGCTCCCCGGAGCACGCGCTGCCGGCCCCATCCATGGGGCCTCAgc > 2:1744236/1‑150 (MQ=255) ttACGGCGGGTCCCTTTTTGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑TGGGGCC‑CAGCGCtt < 2:4517152/150‑1 (MQ=255) ggcggGTCCCTTTTTGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCGACGCTGCGCTCCGGGGTCCCCGCCCGCCGGCCGTGCTACCCGGCGCCCCCGCGGCAGGCCCCCACCACGGGGGCGCACCGCGTgg > 1:4753333/1‑149 (MQ=14) cggGTCCCTTTTTGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACg < 2:4444058/150‑1 (MQ=255) ccTTTTTGCCACGACAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCGACGCTGCGCTCCGGGGTCCCCACGCTCCGGCCTTGCTCCCCGGAGCACGCGCTGCAGGCCCCAACCAGGGGGCCGCAGCGCTTGACGGGCCT‑c > 1:2767668/1‑150 (MQ=17) ttGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGc < 1:2285484/150‑1 (MQ=255) gTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGccc < 2:3206423/150‑1 (MQ=255) ctGGCAAAAAGGAACCAAAAACCCTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACCGGCAT‑CCATGCCCgac < 2:690267/149‑3 (MQ=255) ggCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGTGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑GGATGCCCGTCaa < 2:3945473/150‑2 (MQ=255) ggCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCGCGCTCCGGCCTTGCTCCCGGGCGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCAt > 2:1924513/1‑150 (MQ=255) gCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCAtc < 2:981077/150‑1 (MQ=255) aataaGGAACCAAAAACCGTCGGCTCCCATCATCCGGCGCCTAGGCTGCGCTCCGGGGTCCCCTCGCTCCGGCGTTGGTCCCGGGAGCACGCGGTGCTGGCCCCATCCTTGGGGGGTCAGTGCTTGTCGGGCAT‑CGATGCCCGTCAtctc > 2:3767972/4‑150 (MQ=17) aaaaaGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCCAGGGGCCTCAGCGCTTTACGGGCAT‑ACATGCCCGGCAtctc > 2:1034235/1‑150 (MQ=17) aGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATctccctc > 1:4201805/1‑150 (MQ=255) gAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCACCGGCCATGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATctccctccc > 2:1082310/1‑149 (MQ=255) cAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAAt < 1:3241243/150‑1 (MQ=255) aaaaCCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCCGCCGTGCTACCCGGAGCACGCGCTGCAGGCCCCCACCATGGGGCCACAGCCCGTGACGGGCAT‑CCAAGCCCGTCATCTACCACCGCAAAGc > 1:741776/1‑150 (MQ=17) aCCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTc < 1:1395687/150‑1 (MQ=255) gTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCAc < 2:2280397/150‑1 (MQ=255) tCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCGCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACt < 1:2991140/150‑1 (MQ=255) cGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTc < 2:4931030/150‑1 (MQ=255) cGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTc < 2:421627/150‑1 (MQ=255) cGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTc < 2:4931052/150‑1 (MQ=255) gccattcatcatCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCg < 2:3258743/144‑1 (MQ=255) cTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGc < 2:2882515/150‑1 (MQ=255) tCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCCGCCTTGGTGCCCGGAGCACCCCCTGCAGGCCCCCACCCTGGGGCCGCCGCGCGTGTCGGGCCTCCCATCCCCGCCA‑AACCCTCCCCAAGGCCACCACgccgcc > 2:2124893/1‑150 (MQ=9) cccATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTc > 2:2343734/1‑120 (MQ=255) cccATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTc < 1:2343734/120‑1 (MQ=255) ccATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGcctc < 2:3150876/150‑1 (MQ=255) catcatCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGcctcc > 2:1599876/1‑150 (MQ=255) atcatcCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCCT‑CCATGCCCGGCATCTCCCTCCGCAAAGCCTCCACTCGgccgccg > 2:4163351/1‑149 (MQ=255) catcCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGa < 2:1355533/150‑1 (MQ=255) atcCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGaa < 2:3285399/150‑1 (MQ=255) atcCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCGTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCAAGGGGCCTCCGCGCTTGACGGGCAT‑CCATGCCCGTCCTCTCCCTCCGCAATGCCACCACTCGGCCTCCTGaa > 2:4863120/1‑150 (MQ=17) ccGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTTACGGGCAT‑CCATGCCCGTAATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGt > 2:2928127/1‑150 (MQ=255) ccGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCGCCCGCCGTGCTACCGGGAGCACCCCCAGCAGGCCCCAACCATGGGGCCACAGCGCTTGACGGGCAA‑ACAAGCCCCTCAAAACCCACCGCAAAGCCACCACACGGCCGCCTGAAGt > 1:1647142/1‑150 (MQ=16) ccccTACGCTGCGCTCCGGGGTCCCCTCGCGCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCAACTCCCTCCGCAATGCCACCACACGGCCTCCTGAAGTCGCa > 1:1204245/1‑150 (MQ=255) cccTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCaa > 2:1162698/1‑150 (MQ=255) cccTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAAAGCCTCCACTCGGCCTCCTGAAGTCGCaa > 1:4267548/1‑150 (MQ=255) ccTACGCTGCGCTCCGGGGTCCCCTCGCGCCGGCCGTGCTCCCGGGAGCACGCGCTGCAGGCCCCAACCATGGGGCCTCAGCGCGTGACGGGCCA‑CCATGCCCGGCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAAt > 1:2018162/1‑150 (MQ=17) tACGCTGCGCTCCGAGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCt > 2:4613351/1‑150 (MQ=255) cGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGa < 2:3648786/150‑1 (MQ=255) ccTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACcgcg > 2:495610/1‑150 (MQ=255) ccTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACcgcg > 2:627847/1‑150 (MQ=255) cTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACcgcgc > 2:1217300/1‑150 (MQ=255) gCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCt > 2:2488506/1‑150 (MQ=255) cTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCgcgcgcat < 1:5319/150‑3 (MQ=255) tCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTa > 1:4985674/1‑150 (MQ=255) cGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGa < 1:2436680/150‑1 (MQ=255) ggCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGaa < 2:1849245/150‑1 (MQ=255) ggCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGaa < 1:1279811/150‑1 (MQ=255) ggCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGaa < 1:4600073/150‑1 (MQ=255) gCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCGTAGAAg > 1:1071172/1‑150 (MQ=255) ccTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGc < 1:3821965/150‑1 (MQ=255) ttGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCaa < 1:2607595/150‑1 (MQ=255) gCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGCGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGa > 2:4967807/1‑150 (MQ=255) tCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATc > 1:3611670/1‑150 (MQ=255) ccGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCaa > 2:1193911/1‑150 (MQ=255) ccGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCaa < 2:2562866/150‑1 (MQ=255) ccGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCaa > 1:4142357/1‑150 (MQ=255) ccGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCaa < 2:4201805/150‑1 (MQ=255) cGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCGTAGAAGCAAGATCaaa > 1:3543226/1‑150 (MQ=255) gggAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCaaaa < 1:4924410/150‑1 (MQ=255) gggAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCaaaa > 1:111291/1‑150 (MQ=255) aagcgcTG‑AGGCCCCATGGATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGaa > 1:3720631/3‑150 (MQ=255) aCGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCGTAGAAGCACGATCAAAAGCgaga > 2:158271/1‑150 (MQ=255) cgcgCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGaa < 1:1924513/150‑1 (MQ=255) cgcgCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGaa < 1:1241444/150‑1 (MQ=255) cgcgCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGaa < 1:1241457/150‑1 (MQ=255) gcgcTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTTATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGAAg > 1:4404417/1‑150 (MQ=255) gcgcTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGAAg < 1:4136564/150‑1 (MQ=255) gcTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGAAGCg > 1:2004772/1‑150 (MQ=255) cTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCGGGGCAACCCCGGGCGGTGAGGCCAGAGAAAAAGCCAGAAgaga > 1:479490/1‑150 (MQ=14) tGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGGGTTGTAGCTAGATGAAAAGCGAGAAGGGaa > 1:2344053/1‑150 (MQ=17) tGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGAAGCGaa > 1:4056451/1‑150 (MQ=255) tGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGAAGCGaa < 1:1456691/150‑1 (MQ=255) tgaGGCCCCATGGATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGAAGCGAAt > 2:4080048/3‑150 (MQ=255) tgaGGCCCCATGGATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGAAGCGAAt > 1:1599966/3‑150 (MQ=255) cAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGAAGCGAAtt < 2:843987/150‑1 (MQ=255) ggCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGAAGCGAATTCg > 1:563027/1‑150 (MQ=255) ggCCCCACCCAGGGGGCCTCCGGGATGCAGGGGATC‑CCTTGCCGTTAATCCCCCCCCGAATTCCCTCCAGGGGGCCTCC‑GAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGAAGCGAATTCgg < 1:1004058/150‑1 (MQ=12) gCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAAACTGCGTCGGCGGGGCTACCGCGCGCGGGGGATCAAGATCAAAAAAGAGAAAGGAAGTCgg > 1:2919378/1‑150 (MQ=17) ccatccatGGGGCCTCAGCGCTTGACGGGGAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGAAGCGAATTCGGTGa > 1:2816815/1‑150 (MQ=255) ccatccatGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGAAGCGAATTCGGTGa > 2:1396908/1‑150 (MQ=255) ccatccatGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGAAGCGAATTCGGTGa > 2:1183221/1‑150 (MQ=255) ccatccatGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGAAGCGAATTCGGTGa < 2:2004772/150‑1 (MQ=255) atccatGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGAAGCGAATTCGGTGATc > 2:515245/1‑150 (MQ=255) tccatGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGAAGCGAATTCGGTGATcg < 2:1985938/150‑1 (MQ=255) | TTGAAAGGGATGGCCCTTACGGCGGGTCCCTTTTTGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCAT‑CCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGAAGCGAATTCGGTGATCG > NC_002947/2089149‑2089446 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |