| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 235,347 | C→A | 6.1% | intergenic (+44/+81) | PP_0183 → / ← argH | glutathione S‑transferase/argininosuccinate lyase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 235,347 | 0 | C | A | 6.1% | 371.4 / 10.8 | 115 | intergenic (+44/+81) | PP_0183/argH | glutathione S‑transferase/argininosuccinate lyase |
| Reads supporting (aligned to +/- strand): ref base C (47/61); new base A (3/4); total (50/65) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.08e-01 | |||||||||||
Only 100 of 117 total aligned reads displayed.
GTTGCTGCAACTGATGGGGGAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTACC > NC_002947/235198‑235493 | gTTGCTGCAACTGATGGGGGAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑c > 1:2994800/1‑150 (MQ=255)gTTGCTGCAACTGATGGGGGAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑c < 1:1828838/150‑1 (MQ=255) ttGCTGCAACTGATGGGGGAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑t < 1:4923207/150‑1 (MQ=255) gctgcAACTGATGGGGGAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGc < 2:4054437/150‑1 (MQ=255) tgcAACTGATGGGGGAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCAc < 1:4457651/150‑1 (MQ=255) gcAACTGATGGGGGAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCAcc > 1:2236178/1‑150 (MQ=255) gcAACTGATGGGGGAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCAcc > 1:2237089/1‑150 (MQ=255) cTGATGGGGGAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGttt < 2:4315348/150‑1 (MQ=255) gATGGGGGAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGttttt < 1:2865616/150‑1 (MQ=255) gggAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCGTGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAAc < 2:1228845/150‑1 (MQ=255) gagaACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGTGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACtt < 1:1492849/150‑1 (MQ=255) cacattggtggtacggcgccggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgttcgcgggcacGCCCGCTCCCACAGGT‑AATGCACCGTTTTTGAAACtt > 2:3154523‑M1/114‑150 (MQ=255) gaACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTtgt < 2:2931278/150‑1 (MQ=255) gaACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTtgt < 1:338196/150‑1 (MQ=255) acattggtggtacggcgccggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgttcgcgggcatGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTtgt > 1:4612722‑M1/113‑150 (MQ=255) aaCCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGACACTtgtg > 2:4748854/1‑150 (MQ=255) ccGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGATACTTGTGCAt > 2:3129529/1‑150 (MQ=255) ccGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCAt > 1:3267766/1‑150 (MQ=255) cGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCAtt < 1:1970624/150‑1 (MQ=255) tggtacggcgccggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgttcgcgggcacGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTAc > 1:2686706‑M1/106‑150 (MQ=255) tggtacggcgccggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgttcgcgggcacGCCCGCTCCCACAGGT‑AATGCACCGTTTTTGAAACTTGTGCATTa > 1:3245191‑M1/106‑150 (MQ=255) cacaTGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTAc < 2:4094425/150‑1 (MQ=255) acaTGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTAcc > 2:2041977/1‑150 (MQ=255) acaTGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTAcc > 1:920822/1‑150 (MQ=255) gtacggcgccggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgttcgcgggcacGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCt > 1:3352477‑M1/104‑150 (MQ=255) caTGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCt < 1:4302040/150‑1 (MQ=255) caTGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCt < 2:3831968/150‑1 (MQ=255) aTGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCtg > 1:1557181/1‑150 (MQ=255) acggcgccggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgttcgcgggcacGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCtgt > 2:4901121‑M1/102‑150 (MQ=255) gCCGCGGATCTTGGCGGACAAGGGAGCGTCGATGCCGGCCTTCATGGTGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCtgtg < 2:4910193/150‑1 (MQ=255) gCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCtgtg < 2:2342167/150‑1 (MQ=255) cggcgccggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccacggcgagggcttcgccctcgttcgcgggcacGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCtgtg > 1:3019222‑M1/101‑150 (MQ=255) ccGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTAACTGTgg < 1:2982652/150‑1 (MQ=255) gcgGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGa < 1:4980796/150‑1 (MQ=255) cgccggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgttcgcgggcatGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGa > 2:4220873‑M1/98‑150 (MQ=255) ggATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGc < 1:2308329/150‑1 (MQ=255) ccggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgttcgcgggcatGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGc > 1:663369‑M1/96‑150 (MQ=255) cggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgttcgcgggcatGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCg > 2:3965807‑M1/95‑150 (MQ=255) cggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgttcgcgggcacGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCg > 1:4828870‑M1/95‑150 (MQ=255) cTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGc < 1:3051702/150‑1 (MQ=255) ggACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGccc > 1:961546/1‑150 (MQ=255) ggACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTAA‑TGCACAAGTTTCAAAAACGGTGCA‑GACCTGTGGGAGCGGGCATGccc < 2:1975734/150‑1 (MQ=17) aaGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGa > 2:2732348/1‑150 (MQ=255) aGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGTGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGaa < 1:523680/150‑1 (MQ=255) ggAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAAc > 1:1575965/1‑150 (MQ=255) ggAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAAc > 1:618229/1‑150 (MQ=255) ggAAGCGTCGATGCCGGCCTTCATGGAGATAATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAAc < 2:1119021/150‑1 (MQ=255) cGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGGTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAggg > 1:30689/1‑150 (MQ=255) ccGGCCTTCAGGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGGCCCGTTGTTGAAACTTGTGCCTTACCGGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGccc > 1:3145982/1‑150 (MQ=39) ccTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑GGCACCGTTTTTGAACCTTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGc < 2:2205776/150‑1 (MQ=255) gtCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCGTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTCCCTGTGGGAGCGGGCGTGCCCGCGAGCGAGGGCTTCGCCCTCgttc < 2:2663885/149‑4 (MQ=38) cATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCgttcgc < 2:4861585/150‑6 (MQ=255) cATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTg > 2:2777958/1‑150 (MQ=255) ttggatttgatCCGCCGGGGCTCGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCTTTTTTGAAACTTGTGCATTACCTGTGGGCGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTgg < 1:1939147/143‑1 (MQ=38) tGGAGATTATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTggg < 2:1273032/150‑1 (MQ=255) tGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCTTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTggg < 2:1273008/150‑1 (MQ=255) tGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGc < 2:1594229/115‑1 (MQ=255) tGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGc > 1:1594229/1‑115 (MQ=255) tGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTggg < 2:4920175/150‑1 (MQ=255) ggAGTTGATCCACAGCGGCAAGCGCTGAGTCTGGTGTTGCGCCCTTCGCGGGAATGCCCGCTCCCACAGGT‑C‑TGCACCTTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTgggg < 1:3634809/150‑1 (MQ=39) gagaTGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCAGGCCCGCTCCCCCAGGG‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTggggg < 2:1549081/150‑1 (MQ=255) gatCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAg < 2:2436147/150‑1 (MQ=255) gatCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCGTGGGGGATTAg > 1:3893421/1‑150 (MQ=255) atCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGc < 2:4504550/150‑1 (MQ=255) tCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCg > 2:3302882/1‑150 (MQ=255) ttgccgcTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCCAc > 1:4801913/5‑150 (MQ=255) ttgccgcTGAGTCTGGTGTTGAGCCCATCGCGGGCATGCCCGCACCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACAAGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTAGCCTTGGGGGATTATCGAGACGCCAAc > 1:4801669/5‑150 (MQ=39) aaGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACa > 1:1356414/1‑150 (MQ=255) aaGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCAGGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACa < 2:3440940/150‑1 (MQ=255) tGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCt > 2:1017811/1‑150 (MQ=255) gAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCtt < 2:1929363/150‑1 (MQ=255) tCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGcc > 2:1933434/1‑150 (MQ=255) tCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGcc > 2:1933421/1‑150 (MQ=255) tCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGcc > 2:3269334/1‑150 (MQ=255) tgtTGCGCCCTCCGCGGGCAGCCCCGCTCCCACAGGT‑C‑TGCACCTTTTTTGAAAGTTTTGCATTACATGTGGGAGGGGGCGTGCCCGCTAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCacgaa < 1:2777958/150‑1 (MQ=255) tgtTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCacgaa < 2:4839712/150‑1 (MQ=255) tGAGCCCTCCGCGGGCATGCCCGCTCCCCCCGGT‑C‑TGCACCGTTTTTTAAACTTGTGCATTCCCTGTGGGAGGGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCacgaacga < 1:514017/150‑1 (MQ=255) gAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAacgac > 2:831492/1‑150 (MQ=255) gAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAacgac > 2:3575222/1‑150 (MQ=255) gAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCGTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAacgac > 2:3575231/1‑150 (MQ=255) tcgttcgcgggcacGCCCGCTCCCACAGGT‑AATGCACAAGTTTCAAAAACGGTGCAG‑ACCTGTGGGAGCGGGCATGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGgc < 1:5007963‑M1/136‑1 (MQ=255) cccTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGgc < 2:2237089/150‑1 (MQ=255) ccTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGgca > 1:1978310/1‑150 (MQ=255) ccTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGgca > 1:1978318/1‑150 (MQ=255) ccTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCGCGCCGGGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGgcc > 1:1326125/1‑149 (MQ=255) cTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGgcag > 2:3558396/1‑150 (MQ=255) cTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCGTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGgcag > 1:3627316/1‑150 (MQ=255) cATGCCCGCTCCCCCAGGT‑C‑TGAACCGTTTTTGAAACTTGTGCATTACCTGGGGGCGGGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCt < 1:3204143/150‑1 (MQ=255) aTGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTg > 2:2757885/1‑150 (MQ=255) GCCCGCTCCCACAGGT‑AATGCACAAGTTTCAAAAACGGTGCAG‑ACCTGTGGGAGCGGGCATGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTgcg < 2:4513348‑M1/150‑1 (MQ=255) CCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTgcgcc < 2:4674519‑M1/150‑1 (MQ=255) CCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTgcgcc < 2:3933749‑M1/150‑1 (MQ=255) CGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTgcgccg < 1:2759383‑M1/150‑1 (MQ=255) GCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTgcgccgg < 2:1348622‑M1/150‑1 (MQ=255) TCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTgcgccggcg < 1:3830070‑M1/150‑1 (MQ=255) CCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTgcgccggcgcc < 2:2271844‑M1/150‑1 (MQ=255) CCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTgcgccggcgcc < 1:1812224‑M1/150‑1 (MQ=255) CACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTgcgccggcgccg < 2:2411407‑M1/150‑1 (MQ=255) AGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTac < 1:4611634‑M1/150‑1 (MQ=255) GGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTacc > 2:1116685‑M1/1‑150 (MQ=255) | GTTGCTGCAACTGATGGGGGAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGT‑C‑TGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTACC > NC_002947/235198‑235493 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |