| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,460,072 | T→C | 5.0% | intergenic (+179/‑26) | PP_2150 → / → sthA | thiamine biosynthesis lipoprotein/pyridine nucleotide transhydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,460,072 | 0 | T | C | 5.0% | 448.9 / 7.8 | 140 | intergenic (+179/‑26) | PP_2150/sthA | thiamine biosynthesis lipoprotein/pyridine nucleotide transhydrogenase |
| Reads supporting (aligned to +/- strand): ref base T (52/80); new base C (2/5); total (55/85) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.06e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.12e-01 | |||||||||||
Only 100 of 144 total aligned reads displayed.
GAATGGGTGAAGCATATGTAGTGCGGGCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAGGGCGCAAGGTAGCGATGGTCGATGACCGTCGCCAGGTCGGTG > NC_002947/2459923‑2460221 | gAATGGGTGAAGCATATGTAGTGCGGGCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCtt < 1:2344445/150‑1 (MQ=255) aTGGGTGAAGCATATGTAGTGCGGGCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGc < 2:876905/150‑1 (MQ=255) tGGGTGAAGCATATGTAGTGCGGGCAACATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCg < 2:1161586/150‑1 (MQ=255) gggTGAAGCATATGTAGTGCGGGCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCAAGCCACGGTCGCTCGCgg < 1:901837/150‑1 (MQ=255) gggTGAAGCATATGTAGTGCGGGCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCAAGCCACGGTCGCTCGCgg < 1:901712/150‑1 (MQ=255) gTGAAGCATATGTAGTGCGGGCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGc > 1:3192105/1‑150 (MQ=255) gTGAAGCATATGTAGTGCGGGCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCAAGCCACGGTCGCTCGCgggg < 1:3433389/150‑2 (MQ=255) tgcaGCATATGTAGTGCGGGCAACAGTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGGTCAGGGGTGATGAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCAAGCCACGGTCGCTCGCggggc < 2:3095513/147‑3 (MQ=255) gCATATGTAGTGCGGGCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGtt > 2:2632462/1‑150 (MQ=255) cATATGTAGTGCGGGCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTc < 1:1222097/150‑1 (MQ=255) tGTAGTGCGGGCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCTGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCTTGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGaa < 2:2224299/150‑1 (MQ=255) tGTAGTGCGGGCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGTCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGaa < 2:2275072/150‑1 (MQ=255) tGTAGTGCGGGCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGaa < 1:736515/150‑1 (MQ=255) gTAGTGCGGGCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAg > 2:4333382/1‑150 (MQ=255) aGTGCGGGCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGa < 1:3171083/150‑1 (MQ=255) aGTGCGGGCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGa < 1:2467732/150‑1 (MQ=255) aGTGCGGGCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGa < 2:907961/150‑1 (MQ=255) aGTGCGGGCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGa < 2:1365647/150‑1 (MQ=255) aGTGCGGGCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGa < 1:2061733/150‑1 (MQ=255) aGTGCGGGCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGa < 1:180738/150‑1 (MQ=255) aGTGCGGGCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGa < 1:1358836/150‑1 (MQ=255) gCGGGCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTa < 1:4415440/150‑1 (MQ=255) cGGGCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTAc < 1:865010/150‑1 (MQ=255) gCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCa > 1:266900/1‑150 (MQ=255) gCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCa > 1:368475/1‑150 (MQ=255) aaaaTTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATg > 1:3760556/1‑150 (MQ=255) aaaTTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGTGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATgg < 2:2129168/150‑1 (MQ=255) aaaTTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGTGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATgg < 2:2129297/150‑1 (MQ=255) aaaTTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCa < 2:1041861/147‑1 (MQ=255) aaaTTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCa > 1:1041861/1‑147 (MQ=255) ttGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTg < 1:761327/150‑1 (MQ=255) ggCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTc < 2:106993/150‑1 (MQ=255) gCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCt > 2:2040002/1‑150 (MQ=255) ccTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTa < 2:4956501/150‑1 (MQ=255) tACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACa > 2:733544/1‑150 (MQ=255) tACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACa > 1:2884848/1‑150 (MQ=255) cgcgACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTac < 1:1998057/150‑1 (MQ=255) caacAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTacgac < 2:1414151/147‑1 (MQ=255) ccAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGt < 2:3480964/150‑1 (MQ=255) cAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTa > 1:3523642/1‑150 (MQ=255) cAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTa > 2:2747889/1‑150 (MQ=255) aaGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAg > 1:3469049/1‑150 (MQ=255) aGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAgt > 1:3511110/1‑150 (MQ=255) ggTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAgtgg > 1:1711399/1‑150 (MQ=255) ttAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAgtggtg > 2:1543116/1‑150 (MQ=255) ttAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAgtggtg > 2:1543185/1‑150 (MQ=255) aaTGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCt < 2:1110910/150‑1 (MQ=255) cgcgGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTc > 1:2466796/1‑150 (MQ=255) cggcgTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTccg < 2:4495237/150‑1 (MQ=255) cgTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTccggcc < 2:2963482/150‑1 (MQ=255) gTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTccggccc > 1:5114718/1‑150 (MQ=255) gTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTccggccc < 1:1722093/150‑1 (MQ=255) ggTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCccggccgg < 2:368475/150‑1 (MQ=255) gTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTATGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGt < 1:2894770/150‑1 (MQ=255) gTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGt < 2:2201235/150‑1 (MQ=255) aTTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAg < 1:2224274/150‑1 (MQ=255) ttAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAgg > 2:2565386/1‑150 (MQ=255) gACTGCACCCGTATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACGACGACGTAGTGGTGCTGGGGTCCGGCCCGGCCGGTGAAGgcgc < 1:2646608/150‑1 (MQ=255) tGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCt < 2:3109848/94‑1 (MQ=255) tGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGc < 1:566475/150‑1 (MQ=255) aCCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAAt < 2:2089219/150‑1 (MQ=255) aCCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAAt < 2:3435176/150‑1 (MQ=255) ccGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGa > 2:4876136/1‑150 (MQ=255) ccGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGa > 1:3374266/1‑150 (MQ=255) cGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGaa > 2:1275362/1‑150 (MQ=255) cGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGaa < 1:3958407/150‑1 (MQ=255) ttCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAAcgccgc > 1:2194464/1‑150 (MQ=255) ttCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAAcgccgc < 2:709798/150‑1 (MQ=255) tcATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCaa > 2:4278230/1‑150 (MQ=255) cATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCaaa < 1:605135/150‑1 (MQ=255) aTGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCACTGAACGCCGCCAAAg > 1:3352059/1‑150 (MQ=255) cgcCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAgg < 1:4437551/150‑1 (MQ=255) cgcCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAgg < 1:4672958/150‑1 (MQ=255) cgcCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAgg < 1:4673081/150‑1 (MQ=255) ccccGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAGGgc < 1:1001167/150‑1 (MQ=255) cccGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAGGgcg > 1:2455014/1‑150 (MQ=255) ccGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAGGgcgc > 2:3332085/1‑150 (MQ=255) cggcggCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAGGGCGCa > 2:4491795/1‑150 (MQ=255) gggggcATGATCGGGCCCCGCGAGCGACCTTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAGGGCGCaa < 1:1206450/147‑1 (MQ=255) ggcATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAGGGCGCAAGGt > 2:1089404/1‑150 (MQ=255) gcATGATCGTGCCCCGCGAGCGACCGTGACTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAGGGCGCAAGGTa < 1:848749/150‑1 (MQ=255) aagATCGAGCCCCGCGAGCGACCGTGGCTTGCGGCCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAGGGCGCAAGGTCGc > 2:2306874/3‑150 (MQ=255) gATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAGGGCGCAAGGTAGCGa > 1:3674395/1‑150 (MQ=255) tCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAGGGCGCAAGGTAGCGATg > 1:113557/1‑150 (MQ=255) cGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAGGGCGCAAGGTAGCGATgg < 2:4300657/150‑1 (MQ=255) tGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAGGGCGCAAGGTAGCGATGGTc < 2:4308221/150‑1 (MQ=255) ccccGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAGGGCGCAAGGTAGCGATGGTCGa < 1:996667/150‑1 (MQ=255) cccGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAGGGCGCAAGGTAGCGATGGTCGAt > 2:3649116/1‑150 (MQ=255) cccGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAGGGCGCAAGGTAGCGATGGTCGAt < 2:3192105/150‑1 (MQ=255) ccGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAGGGCGCaa > 2:4617289/1‑133 (MQ=255) cgcgAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAGGGCGCAAGGTAGCGATGGTCGATGa > 2:3459415/1‑150 (MQ=255) cgcgAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAGGGCGCAAGGTAGCGATGGTCGATGa < 1:3302955/150‑1 (MQ=255) cgagcgaCCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAGGGCGCAAGGTAGCGATGGTCGATGAcc < 1:4084958/150‑1 (MQ=255) cgagcgaCCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAGGGCGCAAGGTAGCGATGGTCGATGAcc < 2:2304640/150‑1 (MQ=255) gcgaCCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAGGGCGCAAGGTAGCGATGGTCGATGACCGTc < 2:288938/150‑1 (MQ=255) gaCCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAGGGCGCAAGGTAGCGACGGTCATCGACCATCGc < 1:1528966/150‑1 (MQ=255) cGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCTGGGCGCAAGGTAGCGACGGTCATCGACCATCGctac < 2:2542062/150‑4 (MQ=255) cTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAGGGCGCAAGGTAGCGATGGTCGATGACCGTCGCCAGGTCgg < 2:266900/150‑1 (MQ=255) ttGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAGGGCGCAAGGTAGCGATGGTCGATGACCGTCGCCAGGTCGGt > 1:1190210/1‑150 (MQ=255) tGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAGGGCGCAAGGTAGCGATGGTCGATGACCGTCGCCAGGTCGGTg < 2:1163247/150‑1 (MQ=255) | GAATGGGTGAAGCATATGTAGTGCGGGCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAGGGCGCAAGGTAGCGATGGTCGATGACCGTCGCCAGGTCGGTG > NC_002947/2459923‑2460221 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |