| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,557,932 | C→T | 5.1% | intergenic (+67/+144) | PP_2240 → / ← PP_2241 | ABC transporter permease/ATP‑binding protein/MFS transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,557,932 | 0 | C | T | 5.1% | 369.9 / 6.4 | 117 | intergenic (+67/+144) | PP_2240/PP_2241 | ABC transporter permease/ATP‑binding protein/MFS transporter |
| Reads supporting (aligned to +/- strand): ref base C (43/68); new base T (3/3); total (46/71) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.78e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01 | |||||||||||
Only 100 of 120 total aligned reads displayed.
GGCAGCGTTCCACACCCACCGGCTTGAGGTGGATGGGCATGGCGGTTGGTCGTTACTGGAGCAGGAGGCTGTGCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCGGGTTACAGGATGGAACTGTTCAACCTGCATACGCGGCAGTCGCGAACCGCCAGGTTAGCCAGGTTCAGCG > NC_002947/2557784‑2558081 | ggCAGCGTTCCACACCCACCGGCTTGAGGTGGATGGGCATGGCGGTTGGTCGTTACTGGAGCAGGAGGCTGTGCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGcc < 1:377421/150‑1 (MQ=255)ggCAGCGTTCCACACCCACCGGCTTGAGGTGGATGGGCATGGCGGTTGGTCGTTACTGGAGCAGGAGGCTGTGCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGcc < 2:366947/150‑1 (MQ=255) gCAGCGTTCCACACCCACCGGCTTGAGGTGGATGGGCATGGCGGTTGGTCGTTACTGGAGCAGGAGGCTGTGCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCg > 2:2188676/1‑150 (MQ=255) cAGCGTTCCACACCCACCGGCTTGAGGTGGATGGGCATGGCGGTTGGTCGTTACTGGAGCAGGAGGCTGTGCTGGCCTAGTTCTGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTAAACTGCGTGCATTGCCGa > 1:1044305/1‑150 (MQ=255) cAGCGTTCCACACCCACCGGCTTGAGGTGGATGGGCATGGCGGTTGGTCGTTACTGGAGCAGGAGGCTGTGCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGa < 1:3016292/150‑1 (MQ=255) aGCGTTCCACACCCACCGGCTTGAGGTGGATGGGCATGGCGGTTGGTCGTTACTGGAGCAGGAGGCTGTGCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGAc > 2:1973144/1‑150 (MQ=255) aGCGTTCCACACCCACCGGCTTGAGGTGGATGGGCATGGCGGTTGGTCGTTACTGGAGCAGGAGGCTGTGCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGAc < 2:236518/150‑1 (MQ=255) aGCGTTCCACACCCACCGGCTTGAGGTGGATGGGCATGGCGGTTGGTCGTTACTGGAGCAGGAGGCTGTGCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGAc < 2:236610/150‑1 (MQ=255) gCGTTCCACACCCACCGGCTTGAGGTGGATGGGCGTGGCGGTTGGTCGTTACTGGAGCAGGAGGCTGTGCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACa < 2:1957998/150‑1 (MQ=255) gTTCCACACCCACCGGCTTGAGGTGGATGGGCATGGCGGTTGGTCGTTACTGGAGCAGGAGGCTGTGCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATc < 2:3538232/150‑1 (MQ=255) ttCCACACCCACCGGCTTGAGGTGGATGGGCATGGCGGTTGGTCGTTACTGGAGCAGGAGGCTGTGCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATcc > 2:237563/1‑150 (MQ=255) ttCCACACCCACCGGCTTGAGGTGGATGGGCAGGGCGGTTGGTCGTTACTGGAGCAGGAGGCTGTGCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATcc < 2:3102573/150‑1 (MQ=255) cacaCCCACCGGCTTGAGGTGGATGGGCATGGCGGTTGGTCGTTACTGGAGCAGGAGGCTGTGCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTa < 1:2752226/150‑1 (MQ=255) acacCCACCGGCTTGAGGTGGATGGGCATGGCGGTTGGTCGTTACTGGAGCAGGAGGCTGTGCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTAc < 2:2777565/150‑1 (MQ=255) acacCCACCGGCTTGAGGTGGATGGGCATGGCGGTTGGTCGTTACTGGAGCAGGAGGCTGTGCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTAc > 2:1190559/1‑150 (MQ=255) acacCCACCGGCTTGAGGTGGATGGGCATGGCGGTTGGTCGTTACTGGAGCAGGAGGCTGTGCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTAc < 1:2731377/150‑1 (MQ=255) cacccaccGGCTTGAGGTGGATGGGCATGGCGGTTGGTCGTTACTGGAGCAGGAGGCTGTGCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACt > 2:879319/1‑150 (MQ=255) acccaccGGCTTGAGGTGGATGGGCATGGCGGTTGGTCGTTACTGGAGCAGGAGGCTGTGCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTc < 1:2814483/150‑1 (MQ=255) acccaccGGCTTGAGGTGGATGGGCATGGCGGTTGGTCGTTACTGGAGCAGGAGGCTGTGCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTc > 2:527716/1‑150 (MQ=255) ccaccGGCTTGAGGTGGATGGGCATGGCGGTTGGTCGTTACTGGAGCAGGAGGCTGTGCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGa > 1:4791629/1‑150 (MQ=255) caccGGCTTGAGGTGGATGGGCATGGCGGTTGGTCGTTACTGGAGCAGGAGGCTGTGCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGTGTGCATTGCCGACATCCTTACTCGaa < 1:1687787/150‑1 (MQ=255) caccGGCTTGAGGTGGATGGGCATGGCGGTTGGTCGTTACTGGAGCAGGAGGCTGTGCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGTCGACATCCTTACTCGaa > 1:3786631/1‑150 (MQ=255) caccGGCTTGAGGTGGATGGGCATGGCGGTTGGTCGTTACTGGAGCAGGAGGCTGTGCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGTCGACATCCTTACTCGaa > 1:1193141/1‑150 (MQ=255) caccGGCTTGAGGTGGATGGGCATGGCGGTTGGTCGTTACTGGAGCAGGAGGCTGTGCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGaa > 2:3684078/1‑150 (MQ=255) ttGAGGTGGATGGGCATGGCGGTTGGTCGTTACTGGAGCAGGAGGCTGTGCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTc > 2:868106/1‑150 (MQ=255) gAGGTGGATGGGCATGGCGGTTGGTCGTTACTGGAGCAGGAGGCTGTGCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCAc < 1:212947/150‑1 (MQ=255) gggCATGGCGGTTGGTCGTTACTGGAGCAGGAGGCTGTGCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAggcg > 2:3983435/1‑150 (MQ=255) ggCATGGCGGTTGGTCGTTACTGGAGCAGGAGGCTGTGCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAggcgg < 2:1846367/150‑1 (MQ=255) cGGTTGGTCGTTACTGGAGCAGGAGGCTGTGCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTccc > 2:2902982/1‑150 (MQ=255) cGGTTGGTCGTTACTGGAGCAGGAGGCTGTGCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTccc > 1:2199487/1‑150 (MQ=255) gTTGGTCGTTACTGGAGCAGGAGGCTGTGCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTg > 2:581563/1‑150 (MQ=255) ttGGTCGTTACTGGAGCAGGAGGCTGTGCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGt < 1:3335601/150‑1 (MQ=255) tGGTCGTTACTGGAGCAGGAGGCTGTGCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTc < 1:2688431/150‑1 (MQ=255) cGTTACTGGAGCAGGAGGCTGTGCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGa < 1:1217912/150‑1 (MQ=255) gTTACTGGAGCAGGAGGCTGTGCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGAc < 2:3467099/150‑1 (MQ=255) aCTGGAGCAGGAGGCTGTGCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGtt < 2:4800098/150‑1 (MQ=255) tGGAGCAGGAGGCTGTGCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATAGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCg < 1:3587447/150‑1 (MQ=255) gAGCAGGAGGCTGTGCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGc > 1:1459030/1‑150 (MQ=255) aGCAGGAGGCTGTGCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGcc > 2:102849/1‑150 (MQ=255) gaggCTGTGCTGGCCTAGTTCGGCGTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTgc > 1:3752389/1‑150 (MQ=255) ggCTGTGCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTgcgg > 2:3354311/1‑150 (MQ=255) gCTGTGCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTgcggc < 1:1842963/150‑1 (MQ=255) tgtgCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGcggcgg > 1:683139/1‑150 (MQ=255) tgtgCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGcggcgg > 1:3641101/1‑150 (MQ=255) gtgCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCggg < 2:1686857/150‑1 (MQ=255) tgCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCgggg > 2:2349249/1‑150 (MQ=255) tgCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCgggg < 1:2075168/150‑1 (MQ=255) tgCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCgggg < 2:2045765/150‑1 (MQ=255) tgCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCgggg > 2:2987163/1‑150 (MQ=255) tgCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCgggg < 1:2043677/150‑1 (MQ=255) tGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCg > 2:4486894/1‑150 (MQ=255) cTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCg > 1:1342547/1‑150 (MQ=255) tAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCgg < 1:900060/150‑1 (MQ=255) ttCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCGGGtt < 1:4380747/150‑1 (MQ=255) tCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCGGGTTa < 1:3146698/150‑1 (MQ=255) cGGCTTGGGGGTGAGCTCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCGGGTTAc < 1:1469842/150‑1 (MQ=255) ggCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCGGGTTACa < 2:2611300/150‑1 (MQ=255) tGGGGGTGAGATCGCCATCCGGCATCGCGATTATCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCGGGTTACAGGAt < 1:3483794/150‑1 (MQ=255) gggggTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCGGGTTACAGGATg < 1:4160312/150‑1 (MQ=255) gggggTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCGGGTTACAGGATg < 2:2909656/150‑1 (MQ=255) ggggTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCGGGTTACAGGATgg < 1:929793/150‑1 (MQ=255) ggggTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCGGGTTACAGGATgg < 1:929799/150‑1 (MQ=255) ggTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCGGGTTACAGGATGGaa < 1:555842/150‑1 (MQ=255) ggTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCGGGTTACAGGATGGaa < 1:2604579/150‑1 (MQ=255) ggTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCGGGTTACAGGATGGaa < 2:3388253/150‑1 (MQ=255) tGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCGGGTTACAGGATGGAACt > 2:1620547/1‑150 (MQ=255) agaTCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCGGGTTACAGGATGGAACTGt < 1:955760/150‑1 (MQ=255) aTCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCGGGTTACAGGATGGAACTGTTc > 2:18362/1‑150 (MQ=255) gCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCGGGTTACAGGATGGAACTGTTCAAc < 2:2409829/150‑1 (MQ=255) aTCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCGGGTTACAGGATGGAACTGTTCAACCTg < 2:4606664/150‑1 (MQ=255) aTCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCGGGTTACAGGATGGAACTGTTCAACCTg > 2:1729502/1‑150 (MQ=255) aTCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCGGGTTACAGGATGGAACTGTTCAACCTGCATAcgc < 2:3982674/150‑1 (MQ=255) aTCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGGTCGGCCTCTGCGGCGGGGGCGTCCGGGTTACAGGATGGAACTGTTCAACCTGCATAcgc > 2:780279/1‑150 (MQ=255) cgcgATGAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCGGGTTACAGGATGGAACTGTTCAACCTGCATACGCgg < 2:35674/150‑1 (MQ=255) gcgATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCGGGTTACAGGATGGAACTGTTCAACCTGCATACGCGGc > 2:1953027/1‑150 (MQ=255) cgATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCGGGTTACAGGATGGAACTGTTCAACCTGCATACGCGGCa < 2:3612705/150‑1 (MQ=255) gATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCGGGTTACAGGATGGAACTGTTCAACCTGCATACGCGGCAg > 1:3655061/1‑150 (MQ=255) ttAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCGGGTTACAGGATGGAACTGTTCAACCTGCATACGCGGCAGTc > 1:3604613/1‑150 (MQ=255) tAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGAGGTTCGGCCTCTGCGGCGGGGGCGTCCGGGTTACAGGATGGAACTGTTCAACCTGCATACGCGGCAGTcg < 1:3803701/150‑1 (MQ=255) aGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCGGGTTACAGGATGGAACTGTTCAACCTGCATACGCGGCAGTcgc < 1:527716/150‑1 (MQ=255) ttGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCGGGTTACAGGATGGAACTGTTCAACCTGCATACGCGGCAGTCGCGaa > 2:1476213/1‑150 (MQ=255) tGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCGGGTTACAGGATGGAACTGTTCAACCTGCATACGCGGCAGTCGCGAAc < 1:483593/150‑1 (MQ=255) ccccTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCGGGTTACAGGATGGAACTGTTCAACCTGCATACGCGGCAGTCGCGAACCGc > 2:1044608/1‑150 (MQ=255) cccTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCGGGTTACAGGATGGAACTGTTCAACCTGCATACGCGGCAGTCGCGAACCGcc < 1:1247931/150‑1 (MQ=255) cccTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCGGGTTACAGGATGGAACTGTTCAACCTGCATACGCGGCAGTCGCGAACCGcc > 2:2310324/1‑150 (MQ=255) cTTCACTGCGTGCATTGCCGACATCCTTACTCGCCCGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCGGGTTACAGGATGGAACTGTTCAACCTGCATACGCGGCAGTCGCGAACCGCCAg < 2:3298101/150‑1 (MQ=255) ttCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCGGGTTACAGGATg < 2:1242522/108‑1 (MQ=255) ttCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCGGGTTACAGGATg > 1:1242522/1‑108 (MQ=255) ttCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCGGGTTACAGGATGGAACTGTTCAACCTGCATACGCGGCAGTCGCGAACCGCCAgg > 2:4439282/1‑150 (MQ=255) ttCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCGGGTTACAGGATGGAACTGTTCAACCTGCATACGCGGCAGTCGCGAACCGCCAgg > 2:3882162/1‑150 (MQ=255) ttCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCGGGTTACAGGATGGAACTGTTCAACCTGCATACGCGGCAGTCGCGAACCGCCAgg < 1:3214813/150‑1 (MQ=255) tCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCGGGTTACAGGATGGAACTGTTCAACCTGCATACGCGGCAGTCGCGAACCGCCAGGt > 2:698592/1‑150 (MQ=255) aCTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCGGGTTACAGGATGGAACTGTTCAACCTGCATACGCGGCAGTCGCGAACCGCCAGGTTa < 1:879319/150‑1 (MQ=255) gCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCGGGTTACAGGATGGAACTGTTCAACCTGCATACGCGGCAGTCGCGAACCGCCAGGTTAGcc < 2:807813/150‑1 (MQ=255) cGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCGGGTTACAGGATGGAACTGTTCAACCTGCATACGCGGCAGTCGCGAACCGCCAGGTTAGCCa < 1:237563/150‑1 (MQ=255) ttGTCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCGGGTTACAGGATGGAACTGTTCAACCTGCATACGCGGCAGTCGCGAACCGCCAGGTTAGCCAGGTTCa < 2:4205159/150‑1 (MQ=255) ttGTCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCGGGTTACAGGATGGAACTGTTCAACCTGCATACGCGGCAGTCGCGAACCGCCAGGTTAGCCAGGTTCa < 2:1193141/150‑1 (MQ=255) ttGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCGGGTTACAGGATGGAACTGTTCAACCTGCATACGCGGCAGTCGCGAACCGCCAGGTTAGCCAGGTTCa < 2:2263665/150‑1 (MQ=255) gCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCGGGTTACAGGATGGAACTGTTCAACCTGCATACGCGGCAGTCGCGAACCGCCAGGTTAGCCAGGTTCAgc < 1:3185126/150‑1 (MQ=255) ccGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCGGGTTACAGGATGGAACTGTTCAACCTGCATACGCGGCAGTCGCGAACCGCCAGGTTAGCCAGGTTCAgcg > 2:242506/1‑150 (MQ=255) | GGCAGCGTTCCACACCCACCGGCTTGAGGTGGATGGGCATGGCGGTTGGTCGTTACTGGAGCAGGAGGCTGTGCTGGCCTAGTTCGGCTTGGGGGTGAGATCGCCATCCGGCATCGCGATTAGCTTGGCCCCTTCACTGCGTGCATTGCCGACATCCTTACTCGAACGCCTTCACCGGCAGGCGGCGCTCCCTGTCCAGACGTTCGGCCTCTGCGGCGGGGGCGTCCGGGTTACAGGATGGAACTGTTCAACCTGCATACGCGGCAGTCGCGAACCGCCAGGTTAGCCAGGTTCAGCG > NC_002947/2557784‑2558081 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |