| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,810,427 | A→T | 6.5% | intergenic (+88/+64) | PP_2462 → / ← PP_mr35 | hypothetical protein/cspA regulatory region |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,810,427 | 0 | A | T | 6.5% | 391.5 / 12.8 | 124 | intergenic (+88/+64) | PP_2462/PP_mr35 | hypothetical protein/cspA regulatory region |
| Reads supporting (aligned to +/- strand): ref base A (58/58); new base T (3/5); total (61/63) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.18e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.84e-01 | |||||||||||
Only 100 of 124 total aligned reads displayed.
CGAGCGCCTGAACCTGAACGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCC > NC_002947/2810279‑2810572 | cGAGCGCCTGAACCTGAACGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAg > 1:3252714/1‑150 (MQ=255) ctgaacctgaacGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCTTTGCCCGTgt < 2:534005/150‑2 (MQ=255) ctgaacctgaacGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCTTTGCCCGTgt < 2:715909/150‑2 (MQ=255) ctgaacctgaacGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCTTTGCCCGTgt < 2:3280789/150‑2 (MQ=255) ctgaacctgaacGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGc < 1:145288/150‑1 (MQ=255) tgaacctgaacGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGcc > 2:1523052/1‑150 (MQ=255) aacctgaacGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCCAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCAt > 2:4996761/1‑150 (MQ=255) cctgaacGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTc > 1:3564987/1‑150 (MQ=255) cctgaacGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTc < 2:1860628/150‑1 (MQ=255) cctgaacGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTc < 2:1860565/150‑1 (MQ=255) ctgaacGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCTTTGCCCGTgttcgcgg < 2:340140/150‑8 (MQ=38) ctgaacGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCa > 1:3609734/1‑150 (MQ=255) tgaacGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCTTTGCCCGTgttcgcgg < 1:804777/149‑8 (MQ=38) tgaacGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCAc > 1:1893610/1‑150 (MQ=255) gaacGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAGAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCAcc < 1:1787424/150‑1 (MQ=255) gaacGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCAcc < 2:1779435/150‑1 (MQ=255) tGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACa < 1:1501338/150‑1 (MQ=255) aCGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTc < 1:393493/150‑1 (MQ=255) aCGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTc < 2:1285347/150‑1 (MQ=255) gAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCgg > 2:189356/1‑150 (MQ=255) gAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCgg > 2:2195648/1‑150 (MQ=255) cagggcagggTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGttt < 2:3343941/150‑1 (MQ=255) ggcagggTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGc > 1:841730/1‑150 (MQ=255) ggcagggTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGc < 2:3136459/150‑1 (MQ=255) agggTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAgg < 1:754737/150‑1 (MQ=255) ggTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCa > 2:4953947/1‑150 (MQ=255) ccGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCg < 1:2918279/150‑1 (MQ=255) ccGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCg < 2:4345200/150‑1 (MQ=255) cgcgTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTCGGAGCGGGTTCACCCGCGAACACGGGCCAAGCCCGTGCCATTCACCCTCCAGTCGGGTTCGCAGGCACTCCCGc > 2:3023413/1‑150 (MQ=39) cgcgTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCt < 1:1768013/124‑1 (MQ=255) cgcgTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGc < 2:841730/150‑1 (MQ=255) gcgTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGcc < 2:3905622/150‑1 (MQ=255) aCTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCa < 2:2404607/150‑1 (MQ=255) aCTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCa < 2:403268/150‑1 (MQ=255) aCTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCa < 2:537239/150‑1 (MQ=255) tGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCCAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCCATCCCGCCCCTTCAga > 1:1293905/1‑150 (MQ=255) tGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAga > 1:3044517/1‑150 (MQ=255) tGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATACACCCTACAGTCGGATTCGCAGGCAATACCGCCCCGTCAga > 1:1294006/1‑150 (MQ=255) cGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAgatg > 2:1834132/1‑150 (MQ=255) cGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGGGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAgatg > 1:1562895/1‑150 (MQ=255) ggTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAgatga > 2:1684672/1‑150 (MQ=255) ggTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAgatga < 2:333859/150‑1 (MQ=255) ggTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAgatga < 2:2891799/150‑1 (MQ=255) tGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGc < 1:3582807/150‑1 (MQ=255) gCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCCCCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCa > 1:841533/1‑150 (MQ=255) cACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCAc < 1:2606263/150‑1 (MQ=255) aCGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCAcc < 2:170909/150‑1 (MQ=255) ggggCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATaa < 1:1054200/150‑1 (MQ=255) gCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATaaaaa > 1:4470110/1‑150 (MQ=255) aaCTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATaaaaaaa > 2:583125/1‑150 (MQ=255) ttGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCca > 1:5032160/1‑150 (MQ=255) cgcAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACaa < 2:2693464/150‑1 (MQ=255) aaaTGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGc < 2:1101756/150‑1 (MQ=255) aTGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCgg < 2:2689838/150‑1 (MQ=255) tgtgAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACCAGGGCggg > 2:893657/1‑150 (MQ=255) tgtgAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCggg > 2:893701/1‑150 (MQ=255) tgAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGtt > 2:1218684/1‑150 (MQ=255) tgAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGtt > 1:3484352/1‑150 (MQ=255) tgAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGtt < 1:355871/150‑1 (MQ=255) gAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGttt > 2:2637227/1‑150 (MQ=255) gAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGttt < 2:1893610/150‑1 (MQ=255) aaGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGtttttt > 1:2919197/1‑150 (MQ=255) aaGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGtttttt > 1:2919294/1‑150 (MQ=255) aaGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGtttttt < 2:1148533/150‑1 (MQ=255) aaGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGtttttt < 1:634000/150‑1 (MQ=255) aaGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGtttttt < 1:3707597/150‑1 (MQ=255) aaGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCAATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGtttttt < 1:3782876/150‑1 (MQ=255) ccTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCCTTGTGGCGGGTTTTTTTat < 1:791526/150‑2 (MQ=39) ccTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCAGGCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCCTTGTGGCGGGTTTTTTTat < 2:4955400/150‑2 (MQ=38) cTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACa < 1:1064069/150‑1 (MQ=255) tGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAg > 1:3244751/1‑150 (MQ=255) gcgcGGTCGCCTGGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGc > 2:2146467/1‑150 (MQ=255) tCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACACGGGCGGGTTTTTTTACAGCTATCCg > 1:2623378/1‑150 (MQ=255) tCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCg > 2:3798889/1‑150 (MQ=255) gCCTTGGAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCGACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGaa < 2:4966830/150‑1 (MQ=255) ccTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAAt < 2:4812961/150‑1 (MQ=255) cTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGCTGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGATATCCGAAtt > 1:4419416/1‑150 (MQ=255) cTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAATCCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGaagt > 1:5063954/1‑148 (MQ=255) gTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACt < 1:1490096/150‑1 (MQ=255) aGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTcc > 1:2410850/1‑150 (MQ=255) aGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCAATCACCCTACAGTCGGTTTCGCAGGCCATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGACTTACAcc > 1:3784050/1‑150 (MQ=255) aGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCTCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGa < 2:1364675/150‑1 (MQ=255) aGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGa > 2:3673530/1‑150 (MQ=255) aGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGa > 2:3673525/1‑150 (MQ=255) gCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACCAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGAc > 1:4499315/1‑150 (MQ=255) ggTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGaa < 2:1512288/150‑1 (MQ=255) gTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAATACCCGCCACAAGGGCGGGTTTTGTTACAGCTATCCGAAGTCCTCCGGACGacc > 2:4221343/1‑148 (MQ=255) gTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAAc < 1:3208091/150‑1 (MQ=255) gTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAAc < 2:4457528/150‑1 (MQ=255) aCCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGAATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCtgt < 1:1208112/150‑1 (MQ=255) ccGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGc > 1:2759651/1‑150 (MQ=255) ggcacGGGCTTTGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCt > 2:396123/3‑150 (MQ=255) aaCACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCt < 1:1916466/150‑1 (MQ=255) aaCACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTATTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCt > 2:3035457/1‑150 (MQ=255) gggCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGACTTACTCCGGACGAACCTGTGCAGCCTGCATg > 2:3223332/1‑150 (MQ=255) gggCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATg > 1:1979282/1‑150 (MQ=255) gggCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATg > 2:4450252/1‑150 (MQ=255) gggCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATg > 1:4104033/1‑150 (MQ=255) gggCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGAGGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTATGCAGCCTGCATg > 2:4143591/1‑150 (MQ=255) gCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCCCCAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGcc > 2:810370/1‑150 (MQ=255) | CGAGCGCCTGAACCTGAACGTGGACGAGCAGGGCAGGGTAACCCGCGTCAACTGCGGTTGATGCACGCGGGGGCAACTGCCTTGCGCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCC > NC_002947/2810279‑2810572 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |