| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,321,131 | A→T | 10.0% | intergenic (‑130/+62) | treSA ← / ← PP_2919 | trehalose synthase A/LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,321,131 | 0 | A | T | 10.0% | 310.3 / 2.5 | 121 | intergenic (‑130/+62) | treSA/PP_2919 | trehalose synthase A/LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (51/53); new base T (4/11); total (57/64) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.65e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 122 total aligned reads displayed.
GGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGT > NC_002947/3320985‑3321280 | gggTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGAttt < 2:376497/150‑1 (MQ=255)gggTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGAttt > 2:3875563/1‑150 (MQ=255)gggTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCAGAACCTTCGGCTCAAGATGGGTGTTGGTTTCTTGGCGGGGTTGCCCGCGCCCACAGGCCGACAAACCGCGGAAGCttt > 1:2159030/1‑150 (MQ=255) ggTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCCCTGAAGATTTg > 2:4559176/1‑150 (MQ=255) gTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTgc < 2:2269419/150‑1 (MQ=255) gTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTgc < 1:660894/150‑1 (MQ=255) gCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGc < 1:3455450/150‑1 (MQ=255) tCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCAAAGGCGGACATACCGCGGAAGATTTGCGCTGCACCtgg > 2:4864950/1‑149 (MQ=255) tCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTACCACAGGCGGACAAACCGCGGAAGAATTGCGCGGCAccagg > 2:4864867/1‑147 (MQ=255) tCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCGCCCCCACGCGGCCAGACCGCCGAAGAATTGCGCTGCAccagg > 1:4192049/1‑147 (MQ=255) tttCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTggg < 2:1716976/150‑1 (MQ=255) tttCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCCCTCCCACACGCGGCCCTACCGCAGAAGAATTGCGCTGCACCAGAggg > 1:4600328/1‑150 (MQ=255) cgTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCgg < 1:2773524/150‑1 (MQ=255) gTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCGGAAGATTTGCGCAGCACCGGTGGGAGCggg > 2:3874408/1‑150 (MQ=255) tCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGgc < 2:3882305/150‑1 (MQ=255) tctTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACCTACCGCTGTAGATTTGCGCTGCACCAGTGGGGCCGGgcgcg > 2:4275474/1‑150 (MQ=255) tctTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCGCCCACAGGCGGACATACCGCAGAAGAATTGCGCTGCCCCAGTGGGAGCGGgcccg > 1:4151656/1‑150 (MQ=255) ctTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGgcgcgc < 2:3299195/150‑1 (MQ=255) ctTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGgcgcgc < 2:3298956/150‑1 (MQ=255) tttGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCAGAAGTTTTGCGCTGCACCGGTGGGAGCGGGCGCGcc > 2:3635910/1‑150 (MQ=255) tgtCGGCACCGGCTCAGGTTATGACGGTGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCGAAAGGGGGACATACCGCTGAATTTTTGCGCTGCACAATTGGGAGCGGGCGCGACCGGGaa > 2:2459508/1‑150 (MQ=255) tgtCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTGGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGaa < 2:2813607/150‑1 (MQ=255) tCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAaga < 1:3392606/150‑1 (MQ=255) gCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCGTGCCCCCGCCCCCACGCCGCCCAACCGCGGACGAAGTGCGCGGCCCCGGGGGGAGCCGGCCCCCCCCCCCAGAGGc > 2:3169569/1‑150 (MQ=255) gCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCATGCCCCCGCCCACAGGCGGACAGACCGCAGACGATAAGCCCTGCCCCCGAGGGACCGGGCGCCCCCGCGAagagcc > 2:3169529/1‑148 (MQ=255) cACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGCTGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACCGGCGGACATACCGCTGAAGATTGGCGCGGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGcc < 2:864507/150‑1 (MQ=255) aCCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTTCCCGCTCCCACAGGCGGCCATACCGCTGAAGATTTGCGCGGCACCTGTGGGAGAGGGCGCGGCGGCGGAGAGGCCg > 2:4911375/1‑150 (MQ=255) aCCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTTCCCGCTCCCACAGGCGGACATAACGCTGAAGCTTTGCGCTGCACCAGTGGGAGCGGGCGCGCCCGCGAAGAGGCCg > 2:4335414/1‑150 (MQ=255) aCCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCAAAGGCGGACATACCGCTGAAGATTTTCGCTGCACCGGTGGGGGCGGGCGCGCCCCCGAAGAGGCCg > 2:1803394/1‑150 (MQ=255) cGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCATGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACCGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCggg < 2:2621914/150‑1 (MQ=255) gCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCCCACGCCGACATACCGCTGAAGATTTGCGCGGCACCGGGGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGcc > 2:2778369/1‑150 (MQ=255) tATGACGGCGCTGCGGCCGGAACGTGCGGCTCAAGATGGGTGTGGGTTTCTTCGCGGGCTGGCCCGCCCCCACAGGCGGACATACCGCTGAAGATTTGCGCGGCACCTGTGGGCGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAgg < 1:3691540/150‑1 (MQ=255) gcTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCAGCTCACAAAGGCCGACATACCGCGGAATAATTGCGGTGCACAAGTGGGAGCGGGCGCGCAATCGAAGACGCCGGGCCAGCAAAGCCAGGATCac > 2:1651381/1‑149 (MQ=255) tGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACCTACCGCGGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGACGCCCGGCCAGCAAAGGCAGGATCAgcg > 2:4467459/1‑150 (MQ=255) gCCTTAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCgg < 2:3990602/150‑1 (MQ=255) cTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGc < 2:224231/150‑1 (MQ=255) tGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACTTACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGcc < 2:2448601/150‑1 (MQ=255) gTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACaa < 1:839658/150‑1 (MQ=255) gTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACaa < 2:4549555/150‑1 (MQ=255) gTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCCGACATACCCCCGAACAGTTGCGCTGCACCAGTGGGAGCGGGCGCGCCCCCCAAGAGGCCCGGCCAGCAAACGCACGATCAGCGCCCGGCCGACaa > 2:2239252/1‑150 (MQ=255) gTTCGGCTAATGTTGGGTGTTGGTTTCTTCGCGGGCTGGCCCGCTCCCACCGGCGGACATCCCGCTGAAGTTTTGCGCGGCCCCGGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACaa < 1:3556826/150‑1 (MQ=255) ttCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAAc < 2:3543441/150‑1 (MQ=255) gggCTCAAGCTGGGTGTTGGTTTCTTCGCGGGGTGGCCCGCTCCCACTGGCGGACATACCGCTGAATATTTGCGCTGCACCTGTGGGTGGGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAActg < 1:4022124/149‑1 (MQ=255) cGGCTAAAGTTGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACTGGCGGACATACCGCTGAATATTTGCGCTGCACGTGTGGGAGGGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAActg < 1:4022455/150‑1 (MQ=255) gCTCAAGTTGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGATTTTTTGCGCTGCACCTGTGGTAGTGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAActgct < 1:4103280/150‑1 (MQ=255) cTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCGGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAActgctg < 2:1386259/150‑1 (MQ=255) cTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCCCACCCACAGGCCGACCAACCGCGGAAGATTTTCGCCGCACCCGTGGGGGCGGGCGCCCCCCCGAAGAGGCCCGGCCAGCCAACGCCGGAGCCGCGCCGGGCCCACAAcagcga > 2:1493724/1‑148 (MQ=255) taaaGAGGGGTGTTGTTTTCTTCGCGGGCTTGCCCGCCCCCACCGGCGGACATCCCGCTGAAGATTTGCGCGGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACtgctgc < 1:1509987/148‑1 (MQ=39) tCAAGATGGGTGTTGGTTTCTTCGCGGGCTTTCCCGCTCCCACAGGCGGACATACCGCGGAAGAATTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCCAAGAGGCCGGGCCGGCAAAGGCACGCTCAGCGCCGGGCCGACAACggctgc > 2:3614512/1‑150 (MQ=255) tCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCCCTCCCACAGGCGGTCATACCGCGGAAGATTTGCGCTGCACCGGGGGGGGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACtgctgc > 2:4788122/1‑150 (MQ=255) aaGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCCAAGGCGGACATACCGCGGAAGTTTTGCGCGGCACCGGTGGGAGCGGGCGCGCCCGCCTAGACGCCGGGCCAGCAAAGGCCGGTTCAGCGCCCGGGCGACAACGGCAGCgg > 2:4663266/1‑150 (MQ=255) aGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGt < 2:4317653/150‑1 (MQ=255) ttGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGTTTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGc < 1:3334226/149‑1 (MQ=255) ttGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAATTTTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAAc < 2:29992/150‑1 (MQ=255) ttGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAAc < 2:29926/150‑1 (MQ=255) ttGGTTTCTTCGCGGGCTTGCCCGCGCCCACAGGCGGACATACCGCTTATGTTTTGCGCTGCACCTGGGGGAGGGGGCGCGCCCGCGACGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAAc < 1:1511205/150‑1 (MQ=255) ttGGTTTCTTCGCGGGCTTGCCCCCTCCCACACGCGGACATACCGCTGTAGATTTGGGCTGCACCAGTGGGAGCGGGCGCGCCCGCCAACAGGCCGGGCCTGCAAATGCAGGATCAGCGCCCGGCCGACAACAGCAGCGGTGCCAGaaaa > 2:3467316/1‑149 (MQ=255) gTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGca < 2:1926786/150‑1 (MQ=255) tttCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGcat < 2:4348267/150‑1 (MQ=255) ttcttgGGGGGCTTGCCCGCACCCACTGGCGTACATACCGCTGATTATTTGCGCTGCACGTGTGGGAGGGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGcatc < 1:4283527/150‑1 (MQ=255) ttcttcGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGcatc < 1:3807656/150‑1 (MQ=255) tcGCGGGCTTGCCCGCTCCCACAGGCGGACATCCCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATgg < 2:1454401/150‑1 (MQ=255) tcGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATgg < 2:2159030/150‑1 (MQ=255) gcgGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGACGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGaa > 2:2402371/1‑150 (MQ=255) gcgGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGaa < 2:4480361/150‑1 (MQ=255) gcgGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCAGTGCCAGAAGCGCATCATGGaa < 1:4613073/150‑1 (MQ=255) gcgGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCAGCAAAGGCAGGATCAGCGCCGGGCCGACAACAGCAGCCGTGCCAGAAAAGCATCATGGac > 1:2168589/1‑149 (MQ=39) gcgGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCAGTGGGAGCGGGCGCGCCCGCGGAGAGGCCGGGCCAGCAAAGGCACGATCAGCGCCGGGCCGACAACAGCTGCGGTGCCAGAAACGCCTCAAggca > 1:2168599/1‑148 (MQ=255) gcgGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCAGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCGGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCAAGGaa > 1:2168588/1‑150 (MQ=255) cgGGCTGGCCCGCTCCCACAGGCGGACATACGGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAg < 2:2136120/150‑1 (MQ=255) ttGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACCACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAAtt > 1:916087/1‑150 (MQ=255) ttGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGGAAtt > 1:915963/1‑150 (MQ=255) tggCCCGCTCCCCCAGGCGGACATCCCGCTTAAGATTTGCGCGGCACGTGTGGGAGGGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAAtt < 1:3875563/148‑1 (MQ=255) gCCCGCTCCCACAGGCGTCCATACCGCTGATTTTTTGCGCGGCACCGTGGGGCGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTgc < 1:2778369/150‑1 (MQ=255) gCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTgc > 1:3091854/1‑150 (MQ=255) cccGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTgcg > 2:596312/1‑150 (MQ=255) ccGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTgcgc > 2:2603274/1‑150 (MQ=255) ccGCTCCCACAGGCGGACATACCGCTGAAGATTAGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTgcgc > 2:2603427/1‑150 (MQ=255) cccACTGGCGGACATACGGGTGAAGTTTTGGGCGGCACCTGTGGGCGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGc < 1:4733007/150‑1 (MQ=255) ccACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGcc > 2:1498350/1‑150 (MQ=255) ccACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGcc > 1:1270949/1‑150 (MQ=255) ccACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGcc > 1:4894908/1‑150 (MQ=255) ccACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGcc > 1:4894915/1‑150 (MQ=255) cactGGCGGACATACCGCTTAAGTTTTGCGCGGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCt < 1:4864950/150‑1 (MQ=255) cacaGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCt > 2:173539/1‑150 (MQ=255) cacaGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCt > 2:2730685/1‑150 (MQ=255) cacaGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACACATCATGGAAGTAATTGCGCACCGCCt > 2:565312/1‑150 (MQ=255) cacaGGCGGACATACCGCTGAAGAGTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCt > 1:2981662/1‑150 (MQ=255) acaGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGACGTAATTGCGCACCGCCTg > 1:4318473/1‑150 (MQ=255) gACATACCGCTTAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGcc < 1:4535045/150‑1 (MQ=255) gACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGcc < 1:4535071/150‑1 (MQ=255) aCATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCg < 1:1508162/150‑1 (MQ=255) aCATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCg > 2:2667406/1‑150 (MQ=255) atcccGCTGACGTTTTGCGCTGCACGTGTGGGTGGGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCggg < 1:1343950/147‑1 (MQ=255) tACCGCTTAAGATTTTCGCTGCTCCTGTGGGAGCGGGCGCGCCCGCGTAGAGGCCGGGCCTTCAAAGGCAGTATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAATCTCATCATGGAAGTAATTTCGCACCGCCTTCATCGCCGGGc < 2:2292005/150‑1 (MQ=255) cGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGa > 1:4791388/1‑150 (MQ=255) gCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGaa > 2:4543318/1‑150 (MQ=255) cTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAAt > 2:678101/1‑150 (MQ=255) gATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCg > 2:1200429/1‑150 (MQ=255) aTTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCCCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGt > 1:1957805/1‑150 (MQ=255) | GGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGT > NC_002947/3320985‑3321280 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |