| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,400,868 | C→G | 5.1% | intergenic (+123/‑119) | aroQ‑III → / → PP_3004 | type II 3‑dehydroquinate dehydratase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,400,868 | 0 | C | G | 5.1% | 532.0 / 13.4 | 158 | intergenic (+123/‑119) | aroQ‑III/PP_3004 | type II 3‑dehydroquinate dehydratase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (72/78); new base G (3/5); total (75/83) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.22e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01 | |||||||||||
Only 100 of 159 total aligned reads displayed.
GCGTGCGGCGATGAGCATGGTCTGAGCAGGGCGCAGGGGTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGAATGGACGTCGCTACAACGATCAGTCAACAAG > NC_002947/3400721‑3401017 | cgtgcgGCGATGAGCATGGTCTGAGCAGGGCGCAGGGGTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCatg < 2:4538661/150‑1 (MQ=255) gtgcgGCGATGAGCATGGTCTGAGCAGGGCGCAGGGGTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCatgg < 2:4694179/150‑1 (MQ=255) gtgcgGCGATGAGCATGGTCTGAGCAGGGCGCAGGGGTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCatgg > 1:1191359/1‑150 (MQ=255) gtgcgGCGATGAGCATGGTCTGAGCAGGGCGCAGGGGTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCatgg < 1:5111061/150‑1 (MQ=255) tgcgGCGATGAGCATGGTCTGAGCAGGGCGCAGGGGTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCatgga < 1:3639603/150‑1 (MQ=255) gcggcgATGAGCATGGTCTGAGCAGGGCGCAGGGGTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCatggat < 2:488478/150‑1 (MQ=255) cgATGAGCATGGTCTGAGCAGGGCGCAGGGGTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGaa < 1:1842649/150‑1 (MQ=255) gATGAGCATGGTCTGAGCAGGGCGCAGGGGTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCATGctggatgggta < 2:5081700/150‑4 (MQ=255) gATGAGCATGGTCTGAGCAGGGCGCAGGGGTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGaaa < 1:100726/150‑1 (MQ=255) cATGGTCTGAGCAGGTCGCAGGGGTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGt > 2:3188278/1‑150 (MQ=255) aTGGTCTGAGCAGGGCGCAGGGGTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTa < 1:1760951/150‑1 (MQ=255) aTGGTCTGAGCAGGGCGCAGGGGTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTa < 2:4667249/150‑1 (MQ=255) gTCTGAGCAGGGCGCAGGGGTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCg > 1:5006896/1‑150 (MQ=255) gTCTGAGCAGGGCGCAGGGGTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCg < 2:1329267/150‑1 (MQ=255) gTCTGAGCAGGGCGCAGGGGTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCg > 1:2564663/1‑150 (MQ=255) gTCTGAGCAGGGCGCAGGGGTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCg > 1:2564690/1‑150 (MQ=255) tGAGCAGGGCGCAGGGGTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACt > 2:2790484/1‑150 (MQ=255) aGCAGGGCGCAGGGGTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTc > 1:5066420/1‑150 (MQ=255) gCAGGGCGCAGGGGTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTcc < 1:4130629/150‑1 (MQ=255) gCAGGGCGCAGGGGTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTcc < 1:2470730/150‑1 (MQ=255) gCAGGGCGCAGGGGTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTcc < 2:885004/150‑1 (MQ=255) aGGGCGCAGGGGTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGt < 1:351593/150‑1 (MQ=255) aGGGCGCAGGGGTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGt < 1:7534/150‑1 (MQ=255) aGGGGTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCa < 2:3482795/150‑1 (MQ=255) gggTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATa < 1:4985050/150‑1 (MQ=255) gTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCATGctggatgggta > 2:3722697/1‑118 (MQ=255) gTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCATGctggatgggta < 1:3722697/121‑4 (MQ=255) gTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGt > 1:3798042/1‑150 (MQ=255) gTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGt > 1:3798052/1‑150 (MQ=255) tCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTa < 1:4852663/150‑1 (MQ=255) ggATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGTGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACg > 1:738066/1‑150 (MQ=255) ggATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACg > 1:3026194/1‑150 (MQ=255) gATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACgg > 1:2518982/1‑150 (MQ=255) ctcCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTcc > 1:1970958/1‑150 (MQ=255) cGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGcc > 1:4654247/1‑150 (MQ=255) cGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGcc > 1:1178509/1‑150 (MQ=255) cgTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTcaac < 2:4193857/150‑1 (MQ=255) gTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTcaaca > 1:1430957/1‑150 (MQ=255) tCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTcaacaa < 2:412188/150‑1 (MQ=255) gcgAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCAccc > 2:386911/1‑150 (MQ=255) gcgAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCAccc > 2:20041/1‑150 (MQ=255) gcgAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCAccc > 1:4585787/1‑150 (MQ=255) gcgAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCAccc > 2:386950/1‑150 (MQ=255) cgAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCg < 1:1220912/150‑1 (MQ=255) aGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGtt > 2:2706194/1‑150 (MQ=255) gCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTc < 1:802324/150‑1 (MQ=255) cAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCg > 1:4559635/1‑150 (MQ=255) aGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGt < 2:4939788/150‑1 (MQ=255) aGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGt < 1:2756096/150‑1 (MQ=255) ggTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGtt < 2:68813/150‑1 (MQ=255) ggTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGtt > 1:3290278/1‑150 (MQ=255) ggCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAAcc > 2:2878177/1‑150 (MQ=255) gcggcgACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAg > 2:279058/1‑81 (MQ=255) gACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCGGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCg < 2:790273/150‑1 (MQ=255) cGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCggg < 2:2743966/150‑1 (MQ=255) ggCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCgggg > 2:4384798/1‑150 (MQ=255) cgcCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGct < 2:2478372/150‑1 (MQ=255) gAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCAt > 1:1310898/1‑150 (MQ=255) gAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCAt > 1:459943/1‑150 (MQ=255) tGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGAcc < 2:4674325/150‑1 (MQ=255) ccGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTgg > 1:495015/1‑150 (MQ=255) ccGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTgg < 2:459943/150‑1 (MQ=255) cGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTggg < 1:1067004/150‑1 (MQ=255) cGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTggg > 2:1690766/1‑150 (MQ=255) gTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGa > 2:810327/1‑150 (MQ=255) gTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGa < 2:4592703/150‑1 (MQ=255) gTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGa < 1:1745733/150‑1 (MQ=255) aGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAgg > 2:1470851/1‑150 (MQ=255) aGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAgg > 2:1470877/1‑150 (MQ=255) gtggtgGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGa > 2:4057235/1‑150 (MQ=255) tggtggATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGaa < 2:5011103/150‑1 (MQ=255) tggtggATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGaa < 1:2252338/150‑1 (MQ=255) ggtggATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTcatga < 2:495015/150‑5 (MQ=255) ggtggATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGAAt < 1:3530650/150‑1 (MQ=255) gtggATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGAATg > 1:1640146/1‑150 (MQ=255) gATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGAATGGAc < 2:2986726/150‑1 (MQ=255) gATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGAATGGAc < 2:2059626/150‑1 (MQ=255) tGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGAATGGACGt < 2:1191410/150‑1 (MQ=255) tGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGAATGGACGt < 2:1191359/150‑1 (MQ=255) tCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGAATGGACGTCg < 1:3622187/150‑1 (MQ=255) ggctttccatccatGCTGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGAATGGACGTCGCTACAAc > 1:2039789/7‑150 (MQ=255) gcCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGAATGGACGTCGCTACAAc > 1:2941051/1‑150 (MQ=255) tttccatccatGCTGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGAATGGACGTCGCTACAACGAt > 2:2074163/4‑150 (MQ=255) tttccATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGAATGGACGTCGCTACAACGAt > 1:1580003/4‑150 (MQ=255) tACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGAATGGACGTCGCTACAACGAt > 2:1238717/1‑150 (MQ=255) tACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGAATGGACGTCGCTACAACGAt > 2:2871525/1‑150 (MQ=255) aCCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGAATGGACGTCGCTACAACGATc > 2:472500/1‑150 (MQ=255) aCCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGAATGGACGTCGCTACAACGATc > 1:4397694/1‑150 (MQ=255) cccATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGAATGGACGTCGCTACAACGATCa < 2:4654247/150‑1 (MQ=255) cccATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGAATGGACGTCGCTACAACGATCa < 1:2790484/150‑1 (MQ=255) cccATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGAATGGACGTCGCTACAACGATCa < 1:4143643/150‑1 (MQ=255) ccATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGAATGGACGTCGCTACAACGATCAg > 2:4992929/1‑150 (MQ=255) ccATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGAATGGACGTCGCTACAACGATCAg > 2:2080099/1‑150 (MQ=255) aTCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGAATGGACGTCGCTACAACGATCAGTc > 2:657475/1‑150 (MQ=255) aTCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGAATGGACGTCGCTACAACGATCAGTc < 2:3026194/150‑1 (MQ=255) tCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGAATGGACGTCGCTACAACGATCAGTca > 2:2871033/1‑150 (MQ=255) aGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGAATGGACGTCGCTACAACGATCAGTcaaca > 2:2247453/1‑150 (MQ=255) aGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGAATGGACGTCGCTACAACGATCAGTcaaca > 2:2223252/1‑150 (MQ=255) gCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGTCTCTCATGACCTGGGAGGTCGAATGGACGTCGCTACAACGATCAGTcaacaa < 2:1430957/150‑1 (MQ=255) cATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGAATGGACGTCGCTACAACGATCAGTCAACAAg > 1:4431792/1‑150 (MQ=255) | GCGTGCGGCGATGAGCATGGTCTGAGCAGGGCGCAGGGGTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGAATGGACGTCGCTACAACGATCAGTCAACAAG > NC_002947/3400721‑3401017 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |