BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	3,595,234	T→A	6.0%	I102N (ATC→AAC) ‡	PP_3171 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	3,595,234	0	T	A	6.0%	599.3 / 19.7	182	I102N (ATC→AAC) ‡	PP_3171	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (99/72); new base A (7/4); total (106/76)
Fisher's exact test for biased strand distribution p-value = 7.64e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.75e-01

Only 100 of 183 total aligned reads displayed.

CTCGGCTGCCACGTCGCTGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCAAACGCCGGGTGCGCGGCGTA  >  NC_002947/3595085‑3595382

cTCGGCTGCCACGTCGCTGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTAt                                                                                                                                                      <  2:1354401/150‑1 (MQ=255)

   ggCTGCCACGTCGCTGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGa                                                                                                                                                   <  1:2891004/150‑1 (MQ=255)

   ggCTGCCACGTCGCTGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGa                                                                                                                                                   >  1:4926956/1‑150 (MQ=255)

   ggCTGCCACGTCGCTGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGa                                                                                                                                                   <  2:164001/150‑1 (MQ=255)

      tGCCACGTCGCTGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGAcct                                                                                                                                                >  1:780479/1‑150 (MQ=255)

      tGCCACGTCGCTGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGAcct                                                                                                                                                >  1:780469/1‑150 (MQ=255)

        ccACGTCGCTGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGAcctgg                                                                                                                                              <  1:2200305/150‑1 (MQ=255)

        ccACGTCGCTGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGAcctgg                                                                                                                                              <  1:3797075/150‑1 (MQ=255)

         cACGTCGCTGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGAcctggg                                                                                                                                             <  2:3163910/150‑1 (MQ=255)

           cGTCGCTGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGAcctgggcc                                                                                                                                           <  1:3916936/150‑1 (MQ=255)

                cTGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACctgggcctgggc                                                                                                                                      <  2:3287941/150‑1 (MQ=255)

                 tGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACTGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCtgggcctgggcc                                                                                                                                     <  2:1075376/150‑1 (MQ=255)

                     gATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTgc                                                                                                                                 <  1:2264172/150‑1 (MQ=255)

                     gATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTgc                                                                                                                                 <  1:4859746/150‑1 (MQ=255)

                        cAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGcc                                                                                                                              >  1:4800008/1‑150 (MQ=255)

                        cAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGATGGCGGTATCATGCTTCCCAACCATGCTCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGcc                                                                                                                              >  1:2430345/1‑150 (MQ=255)

                         aaCGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGAcctgggcctgg                                                                                                                                        <  2:1134763/139‑1 (MQ=255)

                         aaCGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCa                                                                                                                             >  2:3055117/1‑150 (MQ=255)

                         aaCGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCa                                                                                                                             >  1:4088802/1‑150 (MQ=255)

                         aaCGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCa                                                                                                                             <  1:2212765/150‑1 (MQ=255)

                         aaCGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGGTGGTGGTGGCCGAACAGTTTGGCACCCTCACTACATTGCACCCAGGTCGTCTCGACCTGGGCCTGGGCCGTGCGCCa                                                                                                                             >  2:4526856/1‑150 (MQ=255)

                          aCGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCTCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAg                                                                                                                            >  1:3082509/1‑150 (MQ=255)

                          aCGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTCTCGACCTGGGCCTGGGCCGTGCGCCAg                                                                                                                            >  2:1031487/1‑150 (MQ=255)

                          aCGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAg                                                                                                                            >  1:2732901/1‑150 (MQ=255)

                          aCGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAg                                                                                                                            >  2:4455319/1‑150 (MQ=255)

                           cGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGTTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAgg                                                                                                                           <  1:5096076/150‑1 (MQ=255)

                            gAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGc                                                                                                                          <  1:2619237/150‑1 (MQ=255)

                              aaTCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCAc                                                                                                                        <  1:2357613/150‑1 (MQ=255)

                                   ccAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCg                                                                                                                   >  2:2027422/1‑150 (MQ=255)

                                    cAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCgg                                                                                                                  >  2:302757/1‑150 (MQ=255)

                                     aaCGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCggg                                                                                                                 >  1:3232328/1‑150 (MQ=255)

                                     aaCGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCggg                                                                                                                 <  1:2020328/150‑1 (MQ=255)

                                           aCCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCCCGTCCGGGCCGAcc                                                                                                           >  2:322370/1‑150 (MQ=255)

                                           aCCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGAcc                                                                                                           >  2:1238753/1‑150 (MQ=255)

                                              cGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGACGTgcctgg                                                                                                                             <  1:1076396/129‑5 (MQ=255)

                                                acacATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCg                                                                                                      <  2:3144176/150‑1 (MQ=255)

                                                   caTTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGc                                                                                                   >  2:5009510/1‑150 (MQ=255)

                                                   caTTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTAAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGc                                                                                                   <  2:4176483/150‑1 (MQ=255)

                                                    aTTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCCATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCa                                                                                                  >  2:4343487/1‑150 (MQ=255)

                                                     ttCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCAt                                                                                                 >  2:4047065/1‑150 (MQ=255)

                                                     ttCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAACACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCAt                                                                                                 <  2:2228473/150‑1 (MQ=255)

                                                          gtgGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTgcgc                                                                                            <  1:4155054/150‑1 (MQ=255)

                                                                  tGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGgcgccgc                                                                                    >  2:254678/1‑150 (MQ=255)

                                                                    gCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGgcgccgcgc                                                                                  <  2:991353/150‑1 (MQ=255)

                                                                        tATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCaga                                                                              <  1:3819840/150‑1 (MQ=255)

                                                                        tATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCaga                                                                              >  1:2046958/1‑150 (MQ=255)

                                                                         aTCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACAGTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCagag                                                                             <  1:3346448/150‑1 (MQ=255)

                                                                         aTCATGCGGCCCAACCCTGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCagag                                                                             <  1:3346332/150‑1 (MQ=255)

                                                                          tCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGc                                                                            >  2:2691392/1‑150 (MQ=255)

                                                                          tCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGc                                                                            >  2:138569/1‑150 (MQ=255)

                                                                             tgctgcCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCggg                                                                         <  2:1192183/150‑1 (MQ=255)

                                                                              gctgcCCCACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACAGTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGa                                                                        <  2:4242554/150‑1 (MQ=255)

                                                                              gctgcCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGa                                                                        <  2:3869218/150‑1 (MQ=255)

                                                                                   ccAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCg                                                                   >  2:3391692/1‑150 (MQ=255)

                                                                                   ccAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCg                                                                   <  1:1984436/150‑1 (MQ=255)

                                                                                   ccAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCg                                                                   >  1:1277192/1‑150 (MQ=255)

                                                                                     aaCCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGc                                                                 >  2:3967716/1‑150 (MQ=255)

                                                                                     aaCCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGc                                                                 >  2:2313651/1‑150 (MQ=255)

                                                                                     aaCCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGc                                                                 >  2:1282842/1‑150 (MQ=255)

                                                                                     aaCCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGc                                                                 >  2:1418452/1‑150 (MQ=255)

                                                                                      aCCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGcc                                                                >  2:781233/1‑150 (MQ=255)

                                                                                      aCCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGcc                                                                <  1:3754532/150‑1 (MQ=255)

                                                                                       ccATGCGCCGTTGGTGGTGGCCCAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCTTATCGACCTGGGCCTGGCCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGAATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCa                                                               <  1:922537/150‑1 (MQ=255)

                                                                                              ccGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATc                                                        <  2:471180/150‑1 (MQ=255)

                                                                                              ccGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATc                                                        >  1:1260360/1‑150 (MQ=255)

                                                                                               cGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCg                                                       <  1:2974857/150‑1 (MQ=255)

                                                                                                   ggtggtggCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGa                                                   <  2:2183978/150‑1 (MQ=255)

                                                                                                   ggtggtggCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGa                                                   <  2:2183996/150‑1 (MQ=255)

                                                                                                        tggCCGAACCGTTTGGCACCCTCAATACATTGCACCCCGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGc                                              <  1:4526856/150‑1 (MQ=255)

                                                                                                          gCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGt                                            >  2:2836245/1‑150 (MQ=255)

                                                                                                            cGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCCGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGa                                          >  1:4334320/1‑150 (MQ=255)

                                                                                                            cGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCCGGACATCGCCGa                                                   >  1:594464/1‑141 (MQ=255)

                                                                                                            cGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGa                                                   <  2:594464/141‑1 (MQ=255)

                                                                                                            cGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGa                                          >  1:4072154/1‑150 (MQ=255)

                                                                                                             gAACAGTTTGGCAGCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGAt                                         >  2:5031959/1‑150 (MQ=255)

                                                                                                             gAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCCTTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGAt                                         >  2:5031932/1‑150 (MQ=255)

                                                                                                             gAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGAt                                         >  2:3766764/1‑150 (MQ=255)

                                                                                                             gAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGAt                                         >  2:3716228/1‑150 (MQ=255)

                                                                                                              aaCAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGAtt                                        <  1:2088386/150‑1 (MQ=255)

                                                                                                                      ggCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGcc                                <  1:1096630/150‑1 (MQ=255)

                                                                                                                         aCCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGAc                             >  1:3575618/1‑150 (MQ=255)

                                                                                                                         aCCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCAGGCCGAc                             >  1:3157670/1‑150 (MQ=255)

                                                                                                                           ccTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACaa                           <  2:4513739/150‑1 (MQ=255)

                                                                                                                           ccTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACaa                           >  2:1322222/1‑150 (MQ=255)

                                                                                                                            cTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAAc                          >  1:3358786/1‑150 (MQ=255)

                                                                                                                            cTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAAc                          <  2:3248171/150‑1 (MQ=255)

                                                                                                                             tCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACg                         >  1:882710/1‑150 (MQ=255)

                                                                                                                               aaTACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGc                       >  2:4720693/1‑150 (MQ=255)

                                                                                                                                 tACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCaa                     >  2:4769922/1‑150 (MQ=255)

                                                                                                                                    aTTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCCGGCACGTCCGGGCCGACCGGTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCAAACg                  >  2:3943319/1‑150 (MQ=255)

                                                                                                                                     ttGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGAGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCAAACGc                 >  2:1895302/1‑150 (MQ=255)

                                                                                                                                        ggcccAGGTCGATACGACCTGGGTCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCAAACGCCgg              >  2:3499790/3‑150 (MQ=255)

                                                                                                                                        ccccccGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCAAACGCCgg              <  2:3353198/148‑1 (MQ=255)

                                                                                                                                        cACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCAAACGCCgg              <  2:2655448/150‑1 (MQ=255)

                                                                                                                                        cACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCAAACGCCgg              <  2:780469/150‑1 (MQ=255)

                                                                                                                                          cccAGGTCGATACGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCAAACGCCGGGt            >  1:2560726/1‑150 (MQ=255)

                                                                                                                                           ccAGGTCGATACGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCAAACGCCGGGTg           >  2:2356986/1‑150 (MQ=255)

                                                                                                                                                tCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCAAACGCCGGGTGCgcgg      >  1:1844025/1‑150 (MQ=255)

                                                                                                                                                gcGTATCGCCCTGGGCCGGGGCCGGGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCCGCGCGGGATGTCGGCCAGGACATCGCCGAGCTGCGGGATTCCCTGGCCGACAACGGCAAACGCCGGGTGCgcgg      <  2:3457070/149‑1 (MQ=255)

                                                                                                                                                   tATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCAAACGCCGCGCACCCGGCGt   <  1:3038699/150‑1 (MQ=255)

CTCGGCTGCCACGTCGCTGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCAAACGCCGGGTGCGCGGCGTA  >  NC_002947/3595085‑3595382

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`