| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,075,576 | T→C | 6.1% | intergenic (‑148/+476) | mdtA ← / ← PP_3586 | multidrug transporter membrane fusion protein/transposase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,075,576 | 0 | T | C | 6.1% | 563.0 / 16.5 | 180 | intergenic (‑148/+476) | mdtA/PP_3586 | multidrug transporter membrane fusion protein/transposase |
| Reads supporting (aligned to +/- strand): ref base T (92/76); new base C (7/4); total (100/80) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.57e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.89e-01 | |||||||||||
Only 100 of 186 total aligned reads displayed.
ATGGGTTGAACGAACCTTGTTCGGAATGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGT > NC_002947/4075427‑4075724 | aTGGGTTGAACGAACCTTGTTCGGAATGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACgt < 1:202998/150‑1 (MQ=255) ggTTGAACGAACCTTGTTCGGAATGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGtt < 2:1495529/150‑1 (MQ=255) ggTTGAACGAACCTTGTTCGGAATGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGtt < 2:4075253/150‑1 (MQ=255) gaaagaacCTTGTTCGGAATGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGACCGGAACGTGTTCCgg > 2:3889728/1‑150 (MQ=255) aacgaacCTTGTTCGGAATGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCggg > 1:133286/1‑150 (MQ=255) aacgaacCTTGTTCGGAATGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCggg < 2:1401504/150‑1 (MQ=255) aacgaacCTTGTTCGGAATGACGACTGGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACAAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAATCGGCCCGGAACGTGTTCCggg > 1:3006697/1‑150 (MQ=255) acgaacCTTGTTCGGAATGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAACGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGc < 2:2152832/150‑1 (MQ=255) cgaacCTTGTTCGGAATGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCACAGGGCCTTTACCAGCGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGcc < 2:3650763/150‑1 (MQ=255) cgaacCTTGTTCGGAATGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACACGTTCCGGGcc < 1:2119707/150‑1 (MQ=255) cTTGTTCGGAATGACGACTTGTGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAACACGGCCCGGAACGTGTTCCGGGCCGTTAc < 1:941597/150‑1 (MQ=255) ttgttgGGAATGACGACTTGTGGAGGATGACCGATAAGCCCTGCCATGGTTTTAGCACCGGGCCTTTCCCCGCGGTTTACCTTGGCCTGCCGTTGCCACGAGGCGGAATTTTAAATGAACACGGCCCGGAACGTGTTCCGGGCCGTTACa < 1:945916/150‑1 (MQ=255) ttGTTCGGAATGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACa < 2:2585017/150‑1 (MQ=255) ttGTTCGGAATGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACa > 1:2154160/1‑150 (MQ=255) gTTCGGACTGACGCCTGGCGGCGGATGAACGATACGCCCGGCCATCGTTTTAGCACCGGGCCTTTACCCGCGGTTTACCTTGGCCTGCCGTTGCCACGCGGCGGAATTTTAAAGGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAgg < 1:1759850/150‑1 (MQ=255) gAATGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGtt > 1:1978324/1‑150 (MQ=255) gAATGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGtt > 1:4554803/1‑150 (MQ=255) gAATGACGACTGGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGtt > 2:3623317/1‑150 (MQ=255) aTGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGc > 2:3115627/1‑150 (MQ=255) tGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCt > 2:2927518/1‑150 (MQ=255) gacgacTTGAGGAGGATGAACGATAAGCACTGCCTTCGTTTTAGCAACGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGTATTTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCtt < 1:3467265/150‑1 (MQ=255) gacgacTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTCCCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGTATTTTTAAATCAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCtt < 1:896778/150‑1 (MQ=255) gacgacTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCtt < 2:2328881/150‑1 (MQ=255) acgacTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTg > 2:1713601/1‑150 (MQ=255) gacTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGa > 1:3431511/1‑150 (MQ=255) gacTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGa > 1:1109901/1‑150 (MQ=255) gacTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGa > 1:477627/1‑150 (MQ=255) ttGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCg > 1:72471/1‑150 (MQ=255) aggaggATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTg > 2:4576063/1‑150 (MQ=255) ggaTGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAAGGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCgg < 1:3900154/150‑1 (MQ=255) gaTGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCggg < 1:305167/150‑1 (MQ=255) aTGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGc > 2:4071043/1‑150 (MQ=255) tGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGcc > 2:4190600/1‑150 (MQ=255) aaCGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAATCGGACCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTAGGAGCGGTGGCGGGCCTg > 1:4588429/1‑150 (MQ=255) cGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGaa < 2:2484457/150‑1 (MQ=255) gATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAg < 2:3759626/150‑1 (MQ=255) gATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAg < 2:2741451/150‑1 (MQ=255) gATAAGCACGGCCATCTTTTTAGCAACGGGCCTTTACCAGAGGTTTCCCTTTGCCTGACGTTGCCAAGAGGCGTAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAg < 1:2630840/150‑1 (MQ=255) aaGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGtt < 1:1670131/150‑1 (MQ=255) aGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTc < 2:668041/150‑1 (MQ=255) aCTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACGTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGt > 2:1315204/1‑150 (MQ=255) cTGCCATCGTTTTAGCAAAGGGCCTGTACCAGCGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGtt < 1:4362619/150‑1 (MQ=255) tGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTg > 1:3484129/1‑150 (MQ=255) gCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGc > 1:793961/1‑150 (MQ=255) cATCGTTTTAGCACAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCt > 1:68397/1‑150 (MQ=255) aTCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTg > 1:1383683/1‑150 (MQ=255) aTCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTg > 1:4126668/1‑150 (MQ=255) tCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTgg > 1:4633796/1‑150 (MQ=255) ttttAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCt > 1:3062155/1‑150 (MQ=255) ttAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTgg > 1:1432353/1‑150 (MQ=255) ttAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTgg > 1:3331937/1‑150 (MQ=255) tAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGAGTTCCGGGCCGTTACAGGGTGTTGCGTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGc > 2:2249001/1‑150 (MQ=255) gggCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTcg > 2:3268679/1‑150 (MQ=255) ggCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTcgc < 1:403497/150‑1 (MQ=255) ggCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTcgc < 2:1291524/150‑1 (MQ=255) ggCCTTGACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTcgc < 1:4016856/150‑1 (MQ=255) ccTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACgt < 2:1101852/72‑1 (MQ=255) ccTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCgg < 1:2906938/150‑1 (MQ=255) cAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAAcc > 1:729679/1‑150 (MQ=255) agagGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAAccc > 1:2790096/1‑150 (MQ=255) agagGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAAccc > 2:3531475/1‑150 (MQ=255) gTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCtt < 2:24475/150‑1 (MQ=255) tACCTTTGCCTGACGTTGCCACGCGGCGGATTTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTa < 1:3563266/150‑1 (MQ=255) tACCTTTCCCTGACGTTGCCAAGAGCCGCAATTTTAAATCAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTTCACCCGcgaaag < 1:542114/150‑6 (MQ=255) aCCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAACACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTAt < 1:4711201/150‑1 (MQ=255) ccTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATc < 1:1554030/150‑1 (MQ=255) ccTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATc < 1:4134591/150‑1 (MQ=255) cTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATca > 1:1055496/1‑150 (MQ=255) tttGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGa < 2:4530998/83‑1 (MQ=255) tttGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGa < 2:4530944/83‑1 (MQ=255) tttGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGa > 1:4530998/1‑83 (MQ=255) tttGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATcaa > 2:4748956/1‑150 (MQ=255) tttGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATcaa > 2:2994289/1‑150 (MQ=255) gCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATcaaaca > 1:3978093/1‑150 (MQ=255) cTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATcaaacaaa > 1:3717023/1‑150 (MQ=255) cTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATcaaacaaa > 2:2980330/1‑150 (MQ=255) tGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACaaaa > 1:2424576/1‑150 (MQ=255) gACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAg > 1:2141692/1‑150 (MQ=255) gTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATa > 1:686605/1‑150 (MQ=255) aaGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCAc > 2:847024/1‑150 (MQ=255) aaGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCAc > 1:4320879/1‑150 (MQ=255) gCGTAATTTTAAAGGAACACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGttc < 1:13182/150‑1 (MQ=255) aaTTTAAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGttctttc < 1:4372618/150‑1 (MQ=255) tGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGaaaa > 1:4226524/1‑150 (MQ=255) aaaCGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGaaaaaaa < 2:1933823/150‑1 (MQ=255) aaCGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGttctt > 2:3187153/1‑135 (MQ=255) aaCGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGttctt < 1:3187153/135‑1 (MQ=255) aCGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTTAAGGTTCGGTTGCCTGGTCTGTCCCTTTCGCGGGTGAACCCGCTTATATCAAACTAAAGATTACCAACTGTTCTTTCTAGCGAAAAAAACa < 2:3006697/150‑1 (MQ=37) ggCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAgg < 2:133286/150‑1 (MQ=255) ggCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAgg > 1:3788132/1‑150 (MQ=255) ggCCCGGAACACGGTCCGGGCCGGTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACAGTTCTTTCTAGCGAAAAAAACAgg > 2:4942844/1‑150 (MQ=25) gCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGgc < 2:1432353/150‑1 (MQ=255) gCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGgc < 2:1432392/150‑1 (MQ=255) gCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGgc > 1:1034948/1‑150 (MQ=255) gCCCGGAACACGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTa < 1:758214/135‑1 (MQ=255) gCCCGGAACACGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTa > 2:758214/1‑135 (MQ=255) cccGGAACACGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGgcg > 1:484141/1‑150 (MQ=255) ccGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGgcgc > 1:1852435/1‑150 (MQ=255) ccGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGgcgc > 2:1557518/1‑150 (MQ=255) ccGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGgagc > 1:3739521/1‑150 (MQ=255) | ATGGGTTGAACGAACCTTGTTCGGAATGACGACTTGAGGAGGATGAACGATAAGCACTGCCATCGTTTTAGCAAAGGGCCTTTACCAGAGGTTTACCTTTGCCTGACGTTGCCAAGAGGCGGAATTTTAAATGAAAACGGCCCGGAACGTGTTCCGGGCCGTTACAGGGTGTTGCTTGGAGCGGTGGCGGGCCTGAAGGTTCGGTTGCCTGGTCTGGCCCTTTCGCGGGTGAACCCGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGT > NC_002947/4075427‑4075724 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |