| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,172,149 | A→T | 12.0% | intergenic (‑291/‑96) | katG ← / → PP_3669 | catalase‑peroxidase/LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,172,149 | 0 | A | T | 12.0% | 306.0 / 31.6 | 125 | intergenic (‑291/‑96) | katG/PP_3669 | catalase‑peroxidase/LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (53/51); new base T (3/12); total (56/69) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.86e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.69e-01 | |||||||||||
Only 100 of 131 total aligned reads displayed.
CGCAGGTGCTGACGCGCTGCCCTGTCGCGGAATTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACCTGCTGGTGCTGTTCGAA > NC_002947/4172000‑4172298 | cGCAGGTGCTGACGCGCTGCCCTGTCGCGGAATTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCaa < 1:4428156/150‑1 (MQ=255)cGCAGGTGCTGACGCGCTGCCCTGTCGCGGAATTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCaa < 1:3348488/150‑1 (MQ=255)cGCAGGTGCTGACGCGCTGCCCTGTCGCGGAATTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCaa < 2:440849/150‑1 (MQ=255)cGCAGGTGCTGACGCGCTGCCCTGTCGCGGAATTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCaa < 1:516387/150‑1 (MQ=255) gCAGGTGCTGACGCGCTGCCCTGTCGCGGAATTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAGTAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAg > 1:3791621/1‑150 (MQ=255) gCAGGTGCTGACGCGCTGCCCTGTCGCGGAATTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAg > 2:1448298/1‑150 (MQ=255) gCAGGTGCTGACACGCTGCCCTGTCGCGGAATTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAg < 2:351506/150‑1 (MQ=255) gTGCTGACGCGCTGCCCTGTCGCGGAATTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCcg > 1:1615038/1‑150 (MQ=255) gTGCTGACGCGCTGCCCTGTCGCGGAATTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCcg < 2:4094515/150‑1 (MQ=255) cTGACGCGCTGCCCTGTCGCGGAATTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGa > 2:491087/1‑150 (MQ=255) cTGACGCGCTGCCCTGTCGCGGAATTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGa < 2:1633397/150‑1 (MQ=255) tGACGCGCTGCCCTGTCGCGGAATTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGAt < 2:3630885/150‑1 (MQ=255) tGACGCGCTGCCCTGTCGCGGAATTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGGCTTGACCGCGAt < 2:2776978/150‑1 (MQ=255) tGACGCGCTGCCCTGTCGCGGAATTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTACCGGCCTCATCGCGGGCTTGACCGCGAt < 1:3122793/150‑1 (MQ=255) tGACGCGCTGCACTGTCGCGGAATTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGAt > 2:3111573/1‑150 (MQ=255) aCGCGCTGCCCTGTCGCGGAATTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGa < 1:1891220/150‑1 (MQ=255) aCGCGCTGCCCTGTCGCGGAATTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGa < 1:2111504/150‑1 (MQ=255) aCGCGCTGCCCTGTCGCGGAATTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGGCTTGACCGCGATGa < 1:3730006/150‑1 (MQ=255) aCGCGCTGCCCTGTCGCGGAATTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGGCTTGACCGCGATGa < 1:1055695/150‑1 (MQ=255) aCGCGCTGCCCTGTCGCGGAATTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGGCTTGACCGCGATGa < 1:1866673/150‑1 (MQ=255) aCGCGCTGCCCTGTCGCGGAATTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGGCTTGACCGCGATGa < 1:1135021/150‑1 (MQ=255) aCGCGCTGCCCTGTCGCGGAATTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGGCTTGACCGCGATGa < 1:1135209/150‑1 (MQ=255) gcgcTGCCCTGTCGCGGAATTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGGCTTGACCGCGATGAgg < 2:4924106/150‑1 (MQ=255) gcTGCCCTGTCGCGGAATTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGcc < 1:3728949/150‑1 (MQ=255) tGTCGCGGAATTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCTGAGTTCTAATAGTGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACAt < 1:3397299/150‑1 (MQ=255) tCGCGGAATTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATcc > 1:2670953/1‑150 (MQ=255) tCGCGGAATTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATcc > 1:2670853/1‑150 (MQ=255) gcgGAATTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCAt > 2:3522578/1‑150 (MQ=255) aaTTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATacaa < 2:407161/150‑1 (MQ=255) aaTTCGCGGGGCCACGAGAAAGAATAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATacaa < 1:3773413/150‑1 (MQ=255) gggCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATacaaggcacaag < 2:280707/150‑1 (MQ=255) gCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATacaaggcacaaggc < 2:3955076/150‑1 (MQ=255) ccctataaaGACTCGCCGCGCTGGGGCAGCGGTCTATTCGCGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCTGGCGCAGGCCTGTATCGGCCTAATCGGGGTCACGCCCGCGATGTGGCCGGCACATCCATACAAGGCACAAGGccc < 1:3087755/144‑1 (MQ=255) caCTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCACGATGAGGCCGGCACATCCATCCAAGGCACAAGGCCCCGCGCCATg < 1:3543153/149‑1 (MQ=255) tAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGCTGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCAGGCtt > 1:4833568/1‑150 (MQ=255) aGCCGAGCTTGGGCAGAGGTCTAATAGCGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTc < 1:5046397/150‑1 (MQ=255) aGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTc < 1:2476419/150‑1 (MQ=255) gCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCttaa > 1:369877/1‑148 (MQ=255) ccGCGCTTGGGCAGTGGTCTAATAGCGTGGCTGTGGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCaa < 1:3373341/150‑1 (MQ=255) ccGCGCTGGGGCAGCGGTATAATCGCGGGGCTGTTGGCGCCTGATTGGCTGGCTCTGTCAGGCGCAGGCCTGTAGCGGCCTCATCGCGGTCAAGCCCGCGATGCGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCaa < 1:290486/150‑1 (MQ=255) ccGAGCTTGGGCAGAGGTCTAATAGCGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCaa < 1:2076668/150‑1 (MQ=255) cGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATTGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAAt < 1:2019367/150‑1 (MQ=255) cGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAAt < 2:4888117/150‑1 (MQ=255) gCTTGGGCTTTGGTATAATAGATGTGATTTTGGTGCTTGATTGGCTGGCTCTTTCTGGCGATGTCCTGTATCGGCCTCTTCGGGGTGATGCCCGCCATTAGGCCGGCAAATCCTTACAATGCACAAGGCCCCGCGCCATGCTTCAATaca < 2:2188922/150‑1 (MQ=255) gCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGGACAAGGCCCCGCGCCATGCTTCAATaca > 2:1621961/1‑150 (MQ=255) cTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTGAATCCCGCGATGTGGGCGGCACATGCATACAAGGCACAAGGGCCCGCGCCATGCTTGAATtcac > 1:4928183/1‑150 (MQ=255) gCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATTAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCCTGCTTCAATACACAGCCa > 1:2196975/1‑150 (MQ=255) agGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATAcc > 2:1776190/1‑150 (MQ=255) ggTCTATTTGAGTGGGTGTTGGAGCCTGATTGGCTGGCTCTGTCTGGCGCTGGCGTGTATCGGCCTCAGGGCGGTCACGCCCGCTTTGCGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATAccc < 1:4705105/150‑1 (MQ=255) cTAATAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCttt < 1:4604224/150‑1 (MQ=255) tAATAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTg > 1:1659492/1‑150 (MQ=255) tAATAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTg < 2:906787/150‑1 (MQ=255) aaTAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGc < 2:4589366/150‑1 (MQ=255) aTAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGcc > 2:4496364/1‑150 (MQ=255) aTAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCAGACCCATTGcc > 2:198493/1‑150 (MQ=255) tAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGccc < 1:3236653/150‑1 (MQ=255) tAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGccc > 1:1638531/1‑150 (MQ=255) tAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGccc > 1:2972652/1‑150 (MQ=255) tGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCg > 2:1304229/1‑150 (MQ=255) tGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCg > 2:1304230/1‑150 (MQ=255) tGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGc < 2:4544142/150‑1 (MQ=255) gCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTc < 2:3975643/150‑1 (MQ=255) ccTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCa < 1:4633032/150‑1 (MQ=255) tGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACTGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATg > 2:801269/1‑150 (MQ=255) tGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATg > 1:842488/1‑150 (MQ=255) aTAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGaa > 2:4516834/1‑150 (MQ=255) aGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAAcc < 2:1122979/150‑1 (MQ=255) aGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAAcc < 2:157331/150‑1 (MQ=255) aGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAAcc < 2:1123239/150‑1 (MQ=255) tggctCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATTAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACCGCCATACCCTTTGCCCAGGACGCCGCGCCCTCAAGAACCGCaa > 1:3214941/1‑150 (MQ=255) tgtGTCCGGCGCAGGCCTTTATGGGCCTCATCGGGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGAc < 1:1054619/148‑1 (MQ=255) tctGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGAc < 2:2014112/150‑1 (MQ=255) tctGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCCCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCAAGCTTCAATACACAGCCAAACCCTTTGCCCACGACGCCGAGCCCTCATGAACCCCAACGAc > 1:3690056/1‑150 (MQ=255) tGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCt < 2:3791621/150‑1 (MQ=255) tCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATTCAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTgc > 2:777302/1‑150 (MQ=255) gCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCACCGACCTGCGCCGCGTCGa > 2:2841432/1‑150 (MQ=255) ccTGTTTCGGCCTCATCGCGGTCAAGCCGGCGTTGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGAc < 1:168259/150‑1 (MQ=255) tttCGGCCTCTTCGGGGTCACGCCCGCTATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGa < 1:1402337/148‑1 (MQ=255) tCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAAc < 1:4127147/150‑1 (MQ=255) tCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAAc > 2:1998227/1‑150 (MQ=255) tCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGAAATGAAc < 2:2509417/150‑1 (MQ=255) ccTCATCGCGGTCACGCCCGCGATGCGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACctgc < 1:1922114/150‑1 (MQ=255) ccTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACctgc < 1:4229266/150‑1 (MQ=255) tCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCTCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGTCGCCTAGCGCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACctgctg < 2:2720275/150‑1 (MQ=255) tCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACctgctg > 2:1114003/1‑150 (MQ=255) aTCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACCTGCTGGt > 2:3665411/1‑150 (MQ=255) aTCGCGGGCTTGACCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACCTGCTGGt > 1:3515134/1‑150 (MQ=255) aTCGCGGGCTTGACCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACCTGCTGGt > 1:4030652/1‑150 (MQ=255) tCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACCTGCTGGTg > 1:4326448/1‑150 (MQ=255) tCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACCTGCTGGTg > 1:4509715/1‑150 (MQ=255) tCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACCTGCTGGTg > 2:1359782/1‑150 (MQ=255) tCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACCTGCTGGTg > 2:2473212/1‑150 (MQ=255) tCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACCTGCTGGTg > 2:1159606/1‑150 (MQ=255) gcgGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACCTGCTGGTGCt < 1:789194/150‑1 (MQ=255) gcgGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACCTGCTGGTGCt < 1:789638/150‑1 (MQ=255) gTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACCTGCTGGTGCTGtt < 1:1581723/150‑1 (MQ=255) tCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACCTGCTGGTGCTGTTc > 1:2774914/1‑150 (MQ=255) cAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACCTGCTGGTGCTGTTCg > 2:1441190/1‑150 (MQ=255) aGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACCTGCTGGTGCTGTTCGaa < 2:4326448/150‑1 (MQ=255) aGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACCTGCTGGTGCTGTTCGaa < 1:4690166/150‑1 (MQ=255) | CGCAGGTGCTGACGCGCTGCCCTGTCGCGGAATTCGCGGGGCCACGAGAAAGACTAGCCGAGCTTGGGCAGAGGTCTAATAGAGTGGCTGTTGGAGCCTGATAGGCTGGCTCTGTCAGGCGCAGGCCTGTATCGGCCTCATCGCGGTCAAGCCCGCGATGAGGCCGGCACATCCATACAAGGCACAAGGCCCCGCGCCATGCTTCAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACCTGCTGGTGCTGTTCGAA > NC_002947/4172000‑4172298 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |