BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	4,263,724	C→T	6.1%	S335N (AGC→AAC)	PP_3734 ←	ABC transporter permease

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	4,263,724	0	C	T	6.1%	458.4 / 12.1	147	S335N (AGC→AAC)	PP_3734	ABC transporter permease
Reads supporting (aligned to +/- strand): ref base C (67/71); new base T (3/6); total (70/77)
Fisher's exact test for biased strand distribution p-value = 4.99e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 147 total aligned reads displayed.

CCATGGCCCCTGCGCCAGTCGCCAGGCCTGGGGTTGCGCCAGCGCCAGCAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGAACAAGCCCAGCTCCAGCACCAGGGCG  >  NC_002947/4263576‑4263870

  aTGGCCCCTGCGCCAGTCGCCAGGCCTGGGGTTGCGCCAGCGCCAGCAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCa                                                                                                                                                 >  1:3894167/1‑150 (MQ=255)

   tGGCCCCTGCGCCAGTCGCCAGGCCTGGGGTTGCGCCAGCGCCAGCAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCaa                                                                                                                                                <  1:3561013/150‑1 (MQ=255)

    ggCCCCTGCGCCAGTCGCCAGGCCTGGGGTTGCGCCAGCGCCAGCAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAAc                                                                                                                                               <  1:2619197/150‑1 (MQ=255)

        ccTGCGCCAGTCGCCAGGCCTGGGGTTGCGCCAGCGCCAGCAAAGGCAACCGGGCCGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGc                                                                                                                                           >  2:917769/1‑150 (MQ=255)

             gcCAGTCGCCAGGCCTGGGGTTGCGCCAGCGCCAGCAAAGGCAACCGGGCCGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCg                                                                                                                                      >  2:2064060/1‑150 (MQ=255)

              ccAGTCGCCAGGCCTGGGGTTGCGCCAGCGCCAGCAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCACGTTGAGCCTGCCGGCgg                                                                                                                                     <  2:2828253/150‑2 (MQ=255)

                  tCGCCAGGCCTGGGGTTGCGCCAGCGCCAGCAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTg                                                                                                                                 <  2:3499344/150‑1 (MQ=255)

                    gCCAGGCCTGGGGTTGCGCCAGCGCCAGCAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCACGTTGAGCCTGCCGGCGGGCTggt                                                                                                                               <  1:4493297/150‑2 (MQ=255)

                     ccAGGCCTGGGGTTGCGCCAGCGCCAGCAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGgc                                                                                                                              >  1:1662140/1‑150 (MQ=255)

                     ccAGGCCTGGGGTTGCGCCAGCGCCAGCAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGgc                                                                                                                              <  1:2495923/150‑1 (MQ=255)

                     ccAGGCCTGGGGTTGCGCCAGCGCCAGCAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGgc                                                                                                                              >  1:3739798/1‑150 (MQ=255)

                      cAGGCCTGGGGTTGCGCCAGCGCCAGCAAAGGCAACCGGGCCGCGCGCATTACACTCTCCCAGCCGGCCAGCAATGCACCGAGGCCACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGgcg                                                                                                                             >  2:509538/1‑150 (MQ=255)

                      cAGGCCTGGGGTTGCGCCAGCGCCAGCAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCACTGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGgcg                                                                                                                             >  2:3797106/1‑150 (MQ=255)

                      cAGGCCTGGGGTTGCGCCAGCGCCAGCAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGgcg                                                                                                                             >  2:4095073/1‑150 (MQ=255)

                        ggCCTGGGGTTGCGCCAGCGCCAGCAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGcc                                                                                                                           <  1:1460723/150‑1 (MQ=255)

                           cTGGGGTTGCGCCAGCGCCAGCAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATa                                                                                                                        <  1:4358334/150‑1 (MQ=255)

                           cTGGGGTTGCGCCAGCGCCAGCAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATa                                                                                                                        <  1:3790667/150‑1 (MQ=255)

                             ggggTTGCGCCAGCGCCAGCAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACa                                                                                                                      <  1:3598778/150‑1 (MQ=255)

                             ggggTTGCGCCAGCGCCAGCAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACa                                                                                                                      <  1:3666641/150‑1 (MQ=255)

                               ggTAGCGCCAGCGCCAGCAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAgg                                                                                                                    <  2:3650117/150‑1 (MQ=255)

                                     gccagcgccagcAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGc                                                                                                              >  1:3895145/1‑150 (MQ=255)

                                       cagcgccagcAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAg                                                                                                            <  1:1540721/150‑1 (MQ=255)

                                        agcgccagcAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAgg                                                                                                           <  1:1799395/150‑1 (MQ=255)

                                          cgccagcAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCt                                                                                                         <  1:250556/150‑1 (MQ=255)

                                            ccagcAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTgg                                                                                                       <  1:3870972/150‑1 (MQ=255)

                                              agcAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTggcg                                                                                                     <  2:2541539/150‑1 (MQ=255)

                                               gcAAAGGCAACCGGGCCGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTggcgg                                                                                                    >  1:215562/1‑150 (MQ=255)

                                                      cAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCCGGCTCGACGTGCCGGCGACCTGGGCGCCATCCAGGCCACGCCGGCTGGCGGCCACggc                                                                                             >  2:3700876/1‑148 (MQ=255)

                                                      cAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTc                                                                                             <  2:1729052/150‑1 (MQ=255)

                                                      cAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTc                                                                                             <  2:3554871/150‑1 (MQ=255)

                                                      cAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTc                                                                                             <  1:1608725/150‑1 (MQ=255)

                                                       aaCCGGGCCGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCg                                                                                            >  1:4602136/1‑150 (MQ=255)

                                                       aaCCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCg                                                                                            <  1:4790126/150‑1 (MQ=255)

                                                        aCCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCgg                                                                                           <  2:1513138/150‑1 (MQ=255)

                                                         ccGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCggg                                                                                          <  2:1498457/150‑1 (MQ=255)

                                                              cAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGgcagca                                                                                     <  2:3048537/150‑1 (MQ=255)

                                                              cAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGgcagca                                                                                     <  1:1671059/150‑1 (MQ=255)

                                                              cAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGgcagca                                                                                     <  2:4512547/150‑1 (MQ=255)

                                                              cAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGgcagca                                                                                     <  2:3048606/150‑1 (MQ=255)

                                                              cAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACACGCCACGCAGGCTGGCGGCCACGTCGGgcagca                                                                                     <  2:3672105/150‑1 (MQ=255)

                                                                  gcgcATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCa                                                                                 <  1:999078/150‑1 (MQ=255)

                                                                    gcATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCAcg                                                                               >  2:4712835/1‑150 (MQ=255)

                                                                       ttACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCgg                                                                            >  2:2849365/1‑150 (MQ=255)

                                                                       ttACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCgg                                                                            >  2:769307/1‑150 (MQ=255)

                                                                        tACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGc                                                                           <  1:509538/150‑1 (MQ=255)

                                                                         acacTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGcc                                                                          <  1:3152698/150‑1 (MQ=255)

                                                                          cacTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCa                                                                         >  1:4501625/1‑150 (MQ=255)

                                                                           acTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTg                                                                                                                                            >  2:2662146/1‑82 (MQ=255)

                                                                              ctcCACGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGc                                                                     <  2:1334391/150‑1 (MQ=255)

                                                                               tcCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCg                                                                    >  1:185946/1‑150 (MQ=255)

                                                                                ccAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGt                                                                   <  2:87527/150‑1 (MQ=255)

                                                                                 cAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTa                                                                  >  1:3656651/1‑150 (MQ=255)

                                                                                   aGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAAc                                                                <  2:1487290/150‑1 (MQ=255)

                                                                                    gCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAAcc                                                               >  1:558017/1‑150 (MQ=255)

                                                                                      cGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCAc                                                             <  1:1074310/150‑1 (MQ=255)

                                                                                        gCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTg                                                           <  2:1453829/150‑1 (MQ=255)

                                                                                        gCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTg                                                           >  2:4722164/1‑150 (MQ=255)

                                                                                         ccAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTgg                                                          <  2:3919459/150‑1 (MQ=255)

                                                                                          cAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGc                                                         >  2:1382191/1‑150 (MQ=255)

                                                                                           aGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGcc                                                        >  1:2822311/1‑150 (MQ=255)

                                                                                           aGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGGCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGcc                                                        >  2:1110610/1‑150 (MQ=255)

                                                                                               aTGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCAccc                                                    >  1:2354710/1‑150 (MQ=255)

                                                                                                  cACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCgg                                                 <  1:2593660/150‑1 (MQ=255)

                                                                                                   aCCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAg                                                                                                            <  2:3286625/90‑1 (MQ=255)

                                                                                                   aCCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGc                                                <  2:3090034/150‑1 (MQ=255)

                                                                                                   aCCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGc                                                >  2:194091/1‑150 (MQ=255)

                                                                                                   aCCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGc                                                >  1:4930688/1‑150 (MQ=255)

                                                                                                   aCCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGc                                                <  2:4281236/150‑1 (MQ=255)

                                                                                                     cGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCa                                              <  2:407184/150‑1 (MQ=255)

                                                                                                        ggACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGcc                                           >  1:125173/1‑150 (MQ=255)

                                                                                                            acTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGcccacc                                       >  1:1286618/1‑150 (MQ=255)

                                                                                                              tCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGcccaccca                                     >  2:1419288/1‑150 (MQ=255)

                                                                                                               cACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAg                                    >  2:280642/1‑150 (MQ=255)

                                                                                                                aCCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGt                                   >  2:5022146/1‑150 (MQ=255)

                                                                                                                    gCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCcg                               >  2:4818816/1‑150 (MQ=255)

                                                                                                                    gCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCcg                               >  1:3381043/1‑150 (MQ=255)

                                                                                                                     cacaCCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCcgc                              <  2:334869/150‑1 (MQ=255)

                                                                                                                     cacaCCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCcgc                              <  2:1302537/150‑1 (MQ=255)

                                                                                                                        acCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGaa                           <  1:2881687/150‑1 (MQ=255)

                                                                                                                        acCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGaa                           >  2:4185257/1‑150 (MQ=255)

                                                                                                                           cagcagCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGAACaa                        >  1:3233895/1‑150 (MQ=255)

                                                                                                                           cagcagCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGAACaa                        <  1:2089577/150‑1 (MQ=255)

                                                                                                                           cagcagCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGAACaa                        >  2:3337646/1‑150 (MQ=255)

                                                                                                                             gcagcCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGAACAAGc                      <  1:3364569/150‑1 (MQ=255)

                                                                                                                              cagcCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGAACAAGcc                     <  2:2255375/150‑1 (MQ=255)

                                                                                                                              cagcCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGAACAAGcc                     <  1:412657/150‑1 (MQ=255)

                                                                                                                               agcCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACTCAGTGCCGCGAACAAGccc                    >  1:2412176/1‑150 (MQ=255)

                                                                                                                                 ccaccaGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGAACAAGCCCAg                  >  2:2254235/1‑150 (MQ=255)

                                                                                                                                    ccaggtcgccgGCACGTTGAGCCTGCCGGCGGGCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGAACAAGccc                    >  2:4938065/7‑145 (MQ=38)

                                                                                                                                    ccaggtcgccgGCACGTTGAGCCTGCCGGCGGGCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGAACAAGccc                    <  1:4938065/139‑1 (MQ=38)

                                                                                                                                     caGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGAACAAGCCCAGCTcc              >  2:5035283/1‑150 (MQ=255)

                                                                                                                                     caGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGAACAAGCCCAGCTcc              >  1:1449050/1‑150 (MQ=255)

                                                                                                                                      aGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGAACAAGCCCAGCTCCa             <  2:4930688/150‑1 (MQ=255)

                                                                                                                                      aGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGAACAAGCCCAGCTCCa             <  2:818822/150‑1 (MQ=255)

                                                                                                                                       ggccgccgGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCGGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGAACAAGCCCAGCTCCAg            >  2:5071676/3‑150 (MQ=255)

                                                                                                                                       gCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGAACAAGCCCAGCTCCAg            >  2:4749283/1‑150 (MQ=255)

                                                                                                                                         tcgccgGCACGTTGAGCCTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGAACAAGCCCAGCTCCAGCa          >  2:3905373/2‑150 (MQ=255)

                                                                                                                                               gCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGAACAAGCCCAGCTCCAGCACCAggg    <  2:2007065/150‑1 (MQ=255)

                                                                                                                                                cAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGAACAAGCCCAGCTCCAGCACCAGGgc   <  2:1955147/150‑1 (MQ=255)

                                                                                                                                                 aGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGAACAAGCCCAGCTCCAGCACCAGGgcg  <  1:2659557/150‑1 (MQ=255)

CCATGGCCCCTGCGCCAGTCGCCAGGCCTGGGGTTGCGCCAGCGCCAGCAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGAACAAGCCCAGCTCCAGCACCAGGGCG  >  NC_002947/4263576‑4263870

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`