BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	4,263,728	A→G	6.1%	L334L (TTG→CTG) ‡	PP_3734 ←	ABC transporter permease

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	4,263,728	0	A	G	6.1%	452.2 / 12.4	146	L334L (TTG→CTG) ‡	PP_3734	ABC transporter permease
Reads supporting (aligned to +/- strand): ref base A (67/70); new base G (3/6); total (70/76)
Fisher's exact test for biased strand distribution p-value = 4.97e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.01e-01

Only 100 of 149 total aligned reads displayed.

TGGCCCCTGCGCCAGTCGCCAGGCCTGGGGTTGCGCCAGCGCCAGCAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGAACAAGCCCAGCTCCAGCACCAGGGCGCACAGCA  >  NC_002947/4263579‑4263877

tGGCCCCTGCGCCAGTCGCCAGGCCTGGGGTTGCGCCAGCGCCAGCAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCaa                                                                                                                                                       <  1:3561013/150‑1 (MQ=255)

  gCCCCTGCGCCAGTCGCCAGGCCTGGGGTTGCGCCAGCGCCAGCAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACg                                                                                                                                                     >  1:219312/1‑150 (MQ=255)

     ccTGCGCCAGTCGCCAGGCCTGGGGTTGCGCCAGCGCCAGCAAAGGCAACCGGGCCGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGc                                                                                                                                                  >  2:917769/1‑150 (MQ=255)

     ccTGCGCCAGTCGCCAGGCCTGGGGTTGCGCCAGCGCCAGCAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGc                                                                                                                                                  >  2:412657/1‑150 (MQ=255)

           ccAGTCGCCAGGCCTGGGGTTGCGCCAGCGCCAGCAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCACGTTGAGCCTGCCGGCgg                                                                                                                                            <  2:2828320/150‑2 (MQ=255)

           ccAGTCGCCAGGCCTGGGGTTGCGCCAGCGCCAGCAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCACGTTGAGCCTGCCGGCgg                                                                                                                                            <  2:2828253/150‑2 (MQ=255)

            cAGTCGCCAGGCCTGGGGTTGCGCCAGCGCCAGCAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGAc                                                                                                                                           >  1:5051112/1‑150 (MQ=255)

               tCGCCAGGCCTGGGGTTGCGCCAGCGCCAGCAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTg                                                                                                                                        <  2:3499344/150‑1 (MQ=255)

                 gCCAGGCCTGGGGTTGCGCCAGCGCCAGCAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCACGTTGAGCCTGCCGGCGGGCTggt                                                                                                                                      <  1:4493297/150‑2 (MQ=255)

                  ccAGGCCTGGGGTTGCGCCAGCGCCAGCAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGgc                                                                                                                                     >  1:1662140/1‑150 (MQ=255)

                  ccAGGCCTGGGGTTGCGCCAGCGCCAGCAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGgc                                                                                                                                     >  1:3739798/1‑150 (MQ=255)

                  ccAGGCCTGGGGTTGCGCCAGCGCCAGCAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGgc                                                                                                                                     <  1:2495923/150‑1 (MQ=255)

                   cAGGCCTGGGGTTGCGCCAGCGCCAGCAAAGGCAACCGGGCCGCGCGCATTACACTCTCCCAGCCGGCCAGCAATGCACCGAGGCCACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGgcg                                                                                                                                    >  2:509538/1‑150 (MQ=255)

                   cAGGCCTGGGGTTGCGCCAGCGCCAGCAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGgcg                                                                                                                                    >  2:4095073/1‑150 (MQ=255)

                     ggCCTGGGGTTGCGCCAGCGCCAGCAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGcc                                                                                                                                  <  1:1460723/150‑1 (MQ=255)

                        cTGGGGTTGCGCCAGCGCCAGCAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATa                                                                                                                               <  1:3790695/150‑1 (MQ=255)

                            ggTAGCGCCAGCGCCAGCAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAgg                                                                                                                           <  2:3650117/150‑1 (MQ=255)

                                  gccagcgccagcAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGc                                                                                                                     >  1:2898954/1‑150 (MQ=255)

                                   ccagcgccagcAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCa                                                                                                                    <  2:1739711/150‑1 (MQ=255)

                                    cagcgccagcAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAg                                                                                                                   <  2:1148340/150‑1 (MQ=255)

                                    cagcgccagcAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAg                                                                                                                   <  1:1540721/150‑1 (MQ=255)

                                     agcgccagcAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAgg                                                                                                                  <  1:1799395/150‑1 (MQ=255)

                                        gccagcAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTg                                                                                                               <  2:1468674/150‑1 (MQ=255)

                                         ccagcAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTgg                                                                                                              <  1:3870972/150‑1 (MQ=255)

                                             cAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTggcggc                                                                                                          >  1:4381434/1‑150 (MQ=255)

                                                   cAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCCGGCTCGACGTGCCGGCGACCTGGGCGCCATCCAGGCCACGCCGGCTGGCGGCCACggc                                                                                                    >  2:3700876/1‑148 (MQ=255)

                                                   cAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTc                                                                                                    <  2:3554871/150‑1 (MQ=255)

                                                    aaCCGGGCCGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCg                                                                                                   >  1:4602136/1‑150 (MQ=255)

                                                     aCCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCgg                                                                                                  <  2:1513138/150‑1 (MQ=255)

                                                      ccGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCggg                                                                                                 <  2:1498613/150‑1 (MQ=255)

                                                      ccGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCggg                                                                                                 >  1:860297/1‑150 (MQ=255)

                                                           cAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGgcagca                                                                                            <  2:3048537/150‑1 (MQ=255)

                                                           cAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGgcagca                                                                                            <  2:3048606/150‑1 (MQ=255)

                                                           cAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGgcagca                                                                                            <  2:4512547/150‑1 (MQ=255)

                                                              cgcgcATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGcc                                                                                         >  2:2243485/1‑150 (MQ=255)

                                                               gcgcATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCa                                                                                        <  1:999078/150‑1 (MQ=255)

                                                                 gcATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCAcg                                                                                      >  2:4712835/1‑150 (MQ=255)

                                                                    ttACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCgg                                                                                   >  2:769307/1‑150 (MQ=255)

                                                                     tACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGc                                                                                  <  1:509538/150‑1 (MQ=255)

                                                                        acTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTg                                                                                                                                                   >  2:2662146/1‑82 (MQ=255)

                                                                        acTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTg                                                                                                                                                   <  1:2662146/82‑1 (MQ=255)

                                                                           ctcCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGc                                                                            <  2:1334392/150‑1 (MQ=255)

                                                                            tcCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCg                                                                           >  1:2612562/1‑150 (MQ=255)

                                                                            tcCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCg                                                                           >  1:3614511/1‑150 (MQ=255)

                                                                             ccAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGt                                                                          <  2:87527/150‑1 (MQ=255)

                                                                              cAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTa                                                                         >  1:3656651/1‑150 (MQ=255)

                                                                                aGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAAc                                                                       <  2:1487290/150‑1 (MQ=255)

                                                                                   cGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCAc                                                                    <  1:1074310/150‑1 (MQ=255)

                                                                                    ggCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACt                                                                   >  1:2422792/1‑150 (MQ=255)

                                                                                     gCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTg                                                                  <  2:1453829/150‑1 (MQ=255)

                                                                                     gCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTg                                                                  >  2:4722164/1‑150 (MQ=255)

                                                                                      ccAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTgg                                                                 <  2:3919459/150‑1 (MQ=255)

                                                                                       cAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGc                                                                >  2:1382191/1‑150 (MQ=255)

                                                                                            aTGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCAccc                                                           >  1:2354710/1‑150 (MQ=255)

                                                                                            aTGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCAccc                                                           <  1:1641474/150‑1 (MQ=255)

                                                                                               cACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCgg                                                        <  1:2593660/150‑1 (MQ=255)

                                                                                                aCCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAg                                                                                                                   >  1:3286625/1‑90 (MQ=255)

                                                                                                aCCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAg                                                                                                                   <  2:3286625/90‑1 (MQ=255)

                                                                                                aCCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGc                                                       <  2:4281236/150‑1 (MQ=255)

                                                                                                aCCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGc                                                       <  2:3090034/150‑1 (MQ=255)

                                                                                                aCCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGc                                                       >  2:194091/1‑150 (MQ=255)

                                                                                                aCCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGc                                                       >  1:4930688/1‑150 (MQ=255)

                                                                                                    aGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGc                                                   >  1:450940/1‑150 (MQ=255)

                                                                                                     ggACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGcc                                                  >  1:125173/1‑150 (MQ=255)

                                                                                                         acTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGc                                                                                                                          <  1:3681556/74‑1 (MQ=255)

                                                                                                         acTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGc                                                                                                                          >  2:3681556/1‑74 (MQ=255)

                                                                                                         acTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGcccacc                                              >  1:1286618/1‑150 (MQ=255)

                                                                                                           tCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGcccaccca                                            >  1:1888688/1‑150 (MQ=255)

                                                                                                             aCCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGt                                          >  2:5022146/1‑150 (MQ=255)

                                                                                                              ccAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTg                                         <  2:2724676/150‑1 (MQ=255)

                                                                                                              ccAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTg                                         <  2:3828673/150‑1 (MQ=255)

                                                                                                                 gCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCcg                                      >  1:3381043/1‑150 (MQ=255)

                                                                                                                 gCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCcg                                      >  2:4818816/1‑150 (MQ=255)

                                                                                                                  cacaCCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCcgc                                     <  2:334869/150‑1 (MQ=255)

                                                                                                                  cacaCCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCcgc                                     <  2:1302537/150‑1 (MQ=255)

                                                                                                                     acCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGaa                                  <  1:2881687/150‑1 (MQ=255)

                                                                                                                        cagcagCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGAACaa                               >  1:3233895/1‑150 (MQ=255)

                                                                                                                        cagcagCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGAACaa                               <  1:2089577/150‑1 (MQ=255)

                                                                                                                        cagcagCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGAACaa                               >  1:4886001/1‑150 (MQ=255)

                                                                                                                        cagcagCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGAACaa                               >  2:3337646/1‑150 (MQ=255)

                                                                                                                           cagcCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGAACAAGcc                            <  1:412657/150‑1 (MQ=255)

                                                                                                                              ccaccaGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGAACAAGCCCAg                         >  2:2254235/1‑150 (MQ=255)

                                                                                                                                 ccaggtcgccgGCACGTTGAGCCTGCCGGCGGGCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGAACAAGccc                           >  2:4938065/7‑145 (MQ=38)

                                                                                                                                 ccaGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGAACAAGCCCAGCTc                      <  2:1999991/150‑1 (MQ=255)

                                                                                                                                  caGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGAACAAGCCCAGCTcc                     >  1:1449050/1‑150 (MQ=255)

                                                                                                                                  caGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGAACAAGCCCAGCTcc                     >  2:5035283/1‑150 (MQ=255)

                                                                                                                                   aGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGAACAAGCCCAGCTCCa                    <  2:818822/150‑1 (MQ=255)

                                                                                                                                   aGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGAACAAGCCCAGCTCCa                    <  2:4930688/150‑1 (MQ=255)

                                                                                                                                    ggccgccgGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCGGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGAACAAGCCCAGCTCCAg                   >  2:5071676/3‑150 (MQ=255)

                                                                                                                                    gCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGAACAAGCCCAGCTCCAg                   >  2:4749283/1‑150 (MQ=255)

                                                                                                                                      tcgccgGCACGTTGAGCCTGCCGGCGGCCTGGGCGCCATCCAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCACTGCGTAACCACTCGCCACCCCGGCCAGCCCACCCAGAGCCGCGAACAAGCCCAGCTCCAGcc                 >  2:4003675/2‑149 (MQ=255)

                                                                                                                                      ccgccgGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGAACAAGCCCAGCTCCAGCa                 >  1:3935300/1‑150 (MQ=255)

                                                                                                                                          cgGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGAACAAGCCCAGCTCCAGCACCAg             >  2:2541178/1‑150 (MQ=255)

                                                                                                                                            gCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGAACAAGCCCAGCTCCAGCACCAggg           >  1:1773983/1‑150 (MQ=255)

                                                                                                                                            gCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGAACAAGCCCAGCTCCAGCACCAggg           <  2:2007065/150‑1 (MQ=255)

                                                                                                                                              aGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGAACAAGCCCAGCTCCAGCACCAGGgcg         <  1:2659557/150‑1 (MQ=255)

                                                                                                                                                  tCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGAACAAGCCCAGCTCCAGCACCAGGGCGcaca     >  2:3634944/1‑150 (MQ=255)

                                                                                                                                                  tCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGAACAAGCCCAGCTCCAGCACCAGGGCGcaca     >  1:154891/1‑150 (MQ=255)

                                                                                                                                                    aaCGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGAACAAGCCCAGCTCCAGCACCAGGGCGCAcagc   >  2:2447253/1‑150 (MQ=255)

                                                                                                                                                     aCGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGAACAAGCCCAGCTCCAGCACCAGGGCGCAcagca  <  2:3894167/150‑1 (MQ=255)

TGGCCCCTGCGCCAGTCGCCAGGCCTGGGGTTGCGCCAGCGCCAGCAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGACCTGGGCGCCATACAGGCCACGCAGGCTGGCGGCCACGTCGGGCAGCAGCCACGCGGCCAATGCGTAACCACTGGCCACCCCGGCCAGCCCACCCAGTGCCGCGAACAAGCCCAGCTCCAGCACCAGGGCGCACAGCA  >  NC_002947/4263579‑4263877

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`