Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 284,588 T→A 13.0% intergenic (+34/+29) betT‑II → / ← atsK choline/carnitine/betaine transporter/alpha‑ketoglutarate‑dependent sulfonate dioxygenase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947284,5880TA13.0% 352.4 / 39.3 138intergenic (+34/+29)betT‑II/atsKcholine/carnitine/betaine transporter/alpha‑ketoglutarate‑dependent sulfonate dioxygenase
Reads supporting (aligned to +/- strand):  ref base T (75/42);  new base A (9/9);  total (84/54)
Fisher's exact test for biased strand distribution p-value = 3.00e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.00e-01

Only 100 of 142 total aligned reads displayed.

ACCTGAGCGAAGGCAGCCAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCACGTCATTCTCCTG  >  NC_002947/284439‑284736
                                                                                                                                                     |                                                                                                                                                     
  cTGAGCGAAGGCAGCCAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGc                                                                                                                                                     >  1:247470/1‑150 (MQ=255)
   tGAGCGAAGGCAGCCAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGcc                                                                                                                                                    >  1:4130573/1‑150 (MQ=255)
   tGAGCGAAGGCAGCCAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGcc                                                                                                                                                    >  1:1748595/1‑150 (MQ=255)
       cGAAGGCAGCCAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCTGGCCTCTTCGCGGGCAAGCCCGCGa                                                                                                                                               <  2:4440785/150‑1 (MQ=255)
        gAAGGCAGCCAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCAAGCCCGCGa                                                                                                                                               <  2:459944/150‑1 (MQ=255)
        gAAGGCAGCCAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCTGGCCTCTTCGCGGGCAAGCCCGCGaa                                                                                                                                              <  1:679069/150‑1 (MQ=255)
        gAAGGCAGCCAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCTGGCCTCTTCGCGGGCAAGCCCGCGaa                                                                                                                                              <  1:678645/150‑1 (MQ=255)
         aaGGCAGCCAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGaa                                                                                                                                              <  2:611934/150‑1 (MQ=255)
         aaGGCAGCCAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGaa                                                                                                                                              <  1:3159999/150‑1 (MQ=255)
         aaGGCAGCCAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGaa                                                                                                                                              <  2:3275632/150‑1 (MQ=255)
          aGGCAGCCAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAag                                                                                                                                             <  1:4753192/150‑1 (MQ=255)
           ggCAGCCAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCAAGCCCGCGAaga                                                                                                                                            <  1:3066626/150‑1 (MQ=255)
            gCAGCCAGAACTATGACCGGGTGGGCTACAGCAAGGAGCAGATCATCACCGACATCCTCGACCTGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAagag                                                                                                                                           <  1:158659/150‑1 (MQ=255)
                ccAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGCCCAAGCTCTCCTGTCCGGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCa                                                                                                                                       <  2:3413479/150‑1 (MQ=255)
                  aGAACTATGACGTGTTGGGCTACCGCAAGGAGCTGATAATCAACGACATCCTCGACCAGTACGTGCGGAACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGCCCTCTTCGGGGGCTTGCCCGCGAAGAGGCCAGa                                                                                                                                    <  2:1273391/150‑1 (MQ=255)
                  aGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGGCCGGGTAGAGGCCAGa                                                                                                                                    >  1:3074142/1‑150 (MQ=255)
                         tGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGCGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCTGGCCTCTTCGCGGGCAAGCCCGCGAAGAGGCCAGGACAggaga                                                                                                                             <  1:2072701/150‑4 (MQ=37)
                         tGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCACTTAGCGGGCATGCCCGCGAAGAGGCCCGACAGGCaa                                                                                                                             >  1:2404612/1‑150 (MQ=255)
                          gACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAAc                                                                                                                            <  1:2081319/150‑1 (MQ=255)
                              tggtggGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTAGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAAccccg                                                                                                                        >  1:2260250/1‑147 (MQ=255)
                               ggtggGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCtc                                                                                                                       >  2:1837807/1‑149 (MQ=255)
                               ggtggGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTa                                                                                                                       <  1:3816418/150‑1 (MQ=255)
                                     cTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAgg                                                                                                                 >  2:623073/1‑150 (MQ=255)
                                      tACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGt                                                                                                                >  2:692016/1‑150 (MQ=255)
                                           cAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCCACCGCTAGAAAGGTGCATc                                                                                                           >  1:1791943/1‑150 (MQ=255)
                                             aGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATccc                                                                                                         >  1:2516920/1‑150 (MQ=255)
                                             aGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATccc                                                                                                         >  1:3695729/1‑150 (MQ=255)
                                                     atcatcAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATg                                                                                                 >  1:1995674/1‑150 (MQ=255)
                                                      tcatcaACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATgg                                                                                                <  2:1417700/150‑1 (MQ=255)
                                                       catcaACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGt                                                                                               >  2:560050/1‑150 (MQ=255)
                                                         tcaACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCGAGAAAGGTGCATCCCCAAGGATGGTCg                                                                                             >  1:687142/1‑150 (MQ=255)
                                                           aaCGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCCCTAGAAAGGTGCATACCCAAGGATGGTCGcc                                                                                           >  1:1439508/1‑150 (MQ=255)
                                                             cGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCGCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCg                                                                                         <  2:1223552/150‑1 (MQ=255)
                                                              gACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCgg                                                                                        >  2:2932182/1‑150 (MQ=255)
                                                               aCATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCCCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGt                                                                                       <  1:3798389/150‑1 (MQ=255)
                                                                cATCCTCGCCCTGTACGAGCGGCACTTGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTg                                                                                      <  1:1555852/150‑1 (MQ=255)
                                                                    cTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCCCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATc                                                                                  >  1:2388663/1‑150 (MQ=255)
                                                                     tCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCa                                                                                 >  1:3919448/1‑150 (MQ=255)
                                                                     tCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTGGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCa                                                                                 <  1:2099138/150‑1 (MQ=255)
                                                                     tCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCATCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATACCCAATGAAGGTCGCCCGGTGCATCa                                                                                 >  1:3919684/1‑150 (MQ=255)
                                                                     ccGACCAGTACGCGCGGCACATGCAGTACCTGCACCGGGTCCGCTGACCAAGCTCTCCGGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCa                                                                                 <  2:8532/149‑1 (MQ=255)
                                                                          cAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAagag                                                                                                                                           <  2:1966125/88‑1 (MQ=255)
                                                                          cAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAagag                                                                                                                                           >  1:1966125/1‑88 (MQ=255)
                                                                          cAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCCGGCTTGCCCGCGAACAGGCCAGACACGCAACCGCTAGAAAGGTGCATACCCAAGGATGGTAGCCCGGTGCAACAccccc                                                                            >  1:3229210/1‑148 (MQ=255)
                                                                             tACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCgg                                                                         >  1:5061880/1‑150 (MQ=255)
                                                                                  gCGGCACATGCCGTCCCTGCCCCTGGTCCGCGCACCAAGCTCTCCTGTCCTGGCCTCTGCGGGGGCTGGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTtcgg                                                                    <  1:3103370/150‑1 (MQ=255)
                                                                                  gCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTtcgg                                                                    <  2:1246965/150‑1 (MQ=255)
                                                                                  gCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCACGGTGCATCACCCGCCGGTtcgg                                                                    <  2:3790918/150‑1 (MQ=255)
                                                                                    ggCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTtcggtc                                                                  <  2:4600846/150‑1 (MQ=255)
                                                                                     gCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTtcggtcg                                                                 <  1:4690181/150‑1 (MQ=255)
                                                                                       acaTGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGATGCATCACCCGCCGGTTcggtcggt                                                               >  1:3814780/1‑150 (MQ=255)
                                                                                         aTGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACCGGCAACCGCTAGACAGGTGCATCCCCAAGGAGGGTCGCCCGGGGCGGCACCCGCCGGTTcggtcggtca                                                             >  2:2637849/1‑148 (MQ=255)
                                                                                           gCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAatc                                                           >  2:2533992/1‑150 (MQ=255)
                                                                                           gCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAatc                                                           >  2:1286175/1‑150 (MQ=255)
                                                                                              gTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCCCGGAGAGGCCCGACAGGCAACCGCGAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGGGCATCACCCCCCCGGTCGGTCGGGAatcatc                                                        >  1:487433/1‑150 (MQ=255)
                                                                                                 ccTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCAc                                                     <  2:141040/150‑1 (MQ=255)
                                                                                                   tGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCg                                                   >  2:717167/1‑150 (MQ=255)
                                                                                                   tGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATACCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCg                                                   >  1:4510310/1‑150 (MQ=255)
                                                                                                       cttGGTCAGCGGACCAGGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCaaa                                               >  2:4424399/3‑150 (MQ=255)
                                                                                                          ggTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATg                                            >  1:2964133/1‑150 (MQ=255)
                                                                                                            tCCGCTGACCAAGCTCGCCTGGCCTGGCCTCTTCGGGGGGTGGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAAGGCt                                          <  2:3507915/150‑1 (MQ=255)
                                                                                                             ccGCTCACCAAGCTCTCCTGTCCTGCCCTCTTCGCGGGCTTCCCCGCTAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTg                                         <  1:1599846/150‑1 (MQ=255)
                                                                                                               gCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTggg                                       >  2:4703732/1‑150 (MQ=255)
                                                                                                                cTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGt                                      >  2:4200831/1‑150 (MQ=255)
                                                                                                                   aCCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCAc                                   >  1:350361/1‑150 (MQ=255)
                                                                                                                    ccAAGCTCTCCTGTCCTGGCCTCTTGGCGGGCTTGCCCGCGGAGAGGCCAGACAGGCAAACGCTAGTAATGTGCATACCCAAGGATTGTGGCCCGGTGCATAAACCGCCGGTTAGGTGGGTAATAATCCACCGCAAAATGCTGGGTGAcg                                  >  1:4349955/1‑150 (MQ=255)
                                                                                                                     cAAGCTTTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCAcgc                                 >  2:3358944/1‑150 (MQ=255)
                                                                                                                     cAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCGAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCAcgc                                 >  2:62643/1‑150 (MQ=255)
                                                                                                                     cAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCACACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCCTCCACCGCAAAATGCTGGGTCAcgc                                 >  2:1713057/1‑150 (MQ=255)
                                                                                                                     cAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCGTTCCCCCGGAGAGGCCAGACAGGCAACCGCGAGGAAGGTGCATACCCCAGGATGGTCGCCCGGTGCATAACCCCCCGGTTCGGTCGGTAATAAACCACCCCAAAAAGCTGGGTCAcgc                                 >  1:2694352/1‑150 (MQ=255)
                                                                                                                     cAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCGTGCCCGCGGAGGGGCCCGCCCGGCCACCGCGAGAAAGGTGCATCCCCAAGGATGGTGGCCCCGTGCATCACCCGCCGGGTCGGTCGGTAATCATCCACCGCAAAAAGCTGGGTCAcgc                                 >  1:1437968/1‑150 (MQ=255)
                                                                                                                       aGCTCTCCTGTCCTGGCCTCGTCGCGGGCGTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCgg                               <  2:5004796/150‑1 (MQ=255)
                                                                                                                            tcctgtcctgGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTc                          >  2:232744/1‑150 (MQ=255)
                                                                                                                            tcctgtcctgGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTc                          >  2:302718/1‑150 (MQ=255)
                                                                                                                            tccggtgctgGCCTCTTCGCGGGCTTGCCGGCGAAGTGGCCAGACAGGCAACCGCTAGACTGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATGCACCGCAATATGCTGGGTCACGCGGTTGTc                          <  2:538930/150‑1 (MQ=255)
                                                                                                                                 tcctgGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATACACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGa                     >  2:3494795/1‑150 (MQ=255)
                                                                                                                                    tgGCCTCTTCGCGGGCTTTCCCGCGAAGAGGCCACACAGGCAACCCCAAGAAACGTGCAAACCCAAGGATGGTCGCCCCGTGCATAACCCGCCGGTTCGGTCGGTAAACATCCACCGCAAAATGCTGGGTCACCCGGTTGTCCCAGaaac                  >  1:3857709/1‑148 (MQ=255)
                                                                                                                                        ctctTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCAc              >  1:1048083/1‑150 (MQ=255)
                                                                                                                                        ctctTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCAc              >  1:4546349/1‑150 (MQ=255)
                                                                                                                                        ctctTCGCGGGCCAGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCAc              >  1:2502418/1‑150 (MQ=255)
                                                                                                                                        ctctTCGCGGGCAAGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCAc              >  1:2367699/1‑150 (MQ=255)
                                                                                                                                         tctTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCACg             >  2:3990466/1‑150 (MQ=255)
                                                                                                                                         tctTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCACg             >  1:336579/1‑150 (MQ=255)
                                                                                                                                         tctTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCACg             >  1:385936/1‑150 (MQ=255)
                                                                                                                                         tctTCGCGGGCAAGCCCGCGAAGAGGCCAGGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCAc              >  2:2275428/1‑150 (MQ=255)
                                                                                                                                          ctTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCt                                          <  1:1125383/120‑1 (MQ=255)
                                                                                                                                          ctTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCt                                          >  2:1125383/1‑120 (MQ=255)
                                                                                                                                           ttCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCACGTc           >  1:5048889/1‑150 (MQ=255)
                                                                                                                                           ttCGCGGGCAAGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCgg                               <  2:2134078/130‑1 (MQ=255)
                                                                                                                                           ttCGCGGGCAAGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCa               >  2:1840571/1‑146 (MQ=255)
                                                                                                                                           ttCGCGGGCAAGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCACGTc           >  2:2319375/1‑150 (MQ=255)
                                                                                                                                            tCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCACGTCa          >  2:985759/1‑150 (MQ=255)
                                                                                                                                              gcgGGCAAGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCACGTCAtt        >  2:1729874/1‑150 (MQ=255)
                                                                                                                                               cgGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCACGTCATtc       >  1:1179616/1‑150 (MQ=255)
                                                                                                                                                gggCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCACGTCATtct      >  2:1944162/1‑150 (MQ=255)
                                                                                                                                                  gCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCACGTCATTCTcc    <  2:474524/150‑1 (MQ=255)
                                                                                                                                                   cTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCACGTCATTCTCCt   <  2:5102725/150‑1 (MQ=255)
                                                                                                                                                   cTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCACGTCATTCTCCt   <  2:5102982/150‑1 (MQ=255)
                                                                                                                                                    ttGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCACGTCATTCTCCTg  >  1:3904343/1‑150 (MQ=255)
                                                                                                                                                    ttGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCACGTCATTCTCCTg  >  1:3671266/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
ACCTGAGCGAAGGCAGCCAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACCGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCACGTCATTCTCCTG  >  NC_002947/284439‑284736

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: