| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,892,757 | T→A | 6.3% | intergenic (+190/‑49) | glxR → / → ttuD | 2‑hydroxy‑3‑oxopropionate reductase/hydroxypyruvate reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,892,757 | 0 | T | A | 6.3% | 624.4 / 19.9 | 189 | intergenic (+190/‑49) | glxR/ttuD | 2‑hydroxy‑3‑oxopropionate reductase/hydroxypyruvate reductase |
| Reads supporting (aligned to +/- strand): ref base T (86/91); new base A (3/9); total (89/100) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.41e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 190 total aligned reads displayed.
CTCCTACCAAAGACCGCACAATCGCTCAGAGCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAATTGGGAGCCTGCCATGTCGGTCGATCCGCAAAAACTTCTCCGCGAACTGTTCGACACAGCCATCGCCGCCGCCCACCCCCGTCAAGTCCTCGAACCCTACCTGCCCGCCGAT > NC_002947/4892608‑4892904 | cTCCTACCAAAGACCGCACAATCGCTCAGAGCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGtt < 1:4398892/150‑1 (MQ=255) tCCTACCAAAGACCGCACAATCGCTCAGAGCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTc < 1:3170716/150‑1 (MQ=255) cTACCAAAGACCGCACAATCGCTCAGAGCTGTTCATGTAGGAGCGGGCTTGCCCGCTAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCa < 1:4749434/150‑1 (MQ=255) aCCAAAGACCGCACAATCGCTCAGAGCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAgg > 2:4418140/1‑150 (MQ=255) aCCAAAGACCGCACAATCGCTCAGAGCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAgg > 2:1407614/1‑150 (MQ=255) ccAAAGACCGCACAATCGCTCAGAGCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAggg < 1:2242810/150‑1 (MQ=255) ccAAAGACCGCACAATCGCTCAGAGCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAggg < 2:3146002/150‑1 (MQ=255) cAAAGACCGCACAATCGCTCAGAGCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCACTGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAgggg > 2:4744257/1‑150 (MQ=255) cAAAGACCGCACAATCGCTCAGAGCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAgggg > 1:2332968/1‑150 (MQ=255) cAAAGACCGCACAATCGCTCAGAGCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGGTCGGCCTGCACGGAGGCCGTTCCAgggg > 2:4906094/1‑150 (MQ=255) aaGACCGCACAATCGCTCAGAGCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCg > 1:3330348/1‑150 (MQ=255) gACCGCACACTCGCTCAGAGCTGTGCAGGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACCGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGAACTGCCTCCGTGCAGGCCGAACCAGGGGCggg < 2:2294902/150‑3 (MQ=25) aCCGCACACTCGCTCAGAGCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCGTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCgggt < 2:2901773/150‑4 (MQ=255) ccGCACAATCGCTCAGAGCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGtttt < 1:267141/150‑1 (MQ=255) cGCACAATCGCTCAGAGCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGttttt < 2:748160/150‑1 (MQ=255) cGCACAATCGCTCAGAGCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGttttt < 2:1854946/150‑1 (MQ=255) gCACAATCGCTCAGAGCTGTGCATGTAGGAGCGGGCGTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGAACGGCCTCCGTGCAGGCCGAACCAGGGGCgggtgtt < 2:4350068/150‑7 (MQ=37) cacaCTCGCTCAGAGCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGAACTGCCTCCGTGCAGGCCGAACCAGGGGCgggtgttg < 1:3386608/150‑8 (MQ=25) cacaATCGCTCAGAGCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGa < 1:2811207/150‑1 (MQ=255) cacaAGCGCTCAGAGCTGTGCATGTGGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGa < 2:2638112/150‑1 (MQ=255) caATCGCTCAGAGCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGAtt < 2:5007503/150‑1 (MQ=255) tCGCTCAGAGCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTg > 2:901703/1‑150 (MQ=255) cGCTCAGAGCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGc < 1:353916/150‑1 (MQ=255) gCTCAGAGCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCa < 1:3656860/150‑1 (MQ=255) cTCAGAGCTGTGCATGTAGGATCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAg > 2:4569851/1‑150 (MQ=255) tCAGAGCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGa > 2:4287257/1‑150 (MQ=255) agagCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGaac > 1:581877/1‑150 (MQ=255) agagCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGaac > 1:581870/1‑150 (MQ=255) gagCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGaaca > 1:725224/1‑150 (MQ=255) agCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGaacaa < 2:2679482/150‑1 (MQ=255) cTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAacaaca > 1:2870698/1‑150 (MQ=255) tgtgCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAAcaacaa < 2:1027136/150‑1 (MQ=255) tgCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACaata > 2:1456153/1‑150 (MQ=255) gCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACaataa < 1:1442019/150‑1 (MQ=255) cATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACaataat < 1:2462370/150‑1 (MQ=255) aTGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAAtt < 1:221817/150‑1 (MQ=255) tGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACAGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAATTg > 1:4682545/1‑150 (MQ=255) gTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAATTgg < 2:1049539/150‑1 (MQ=255) gTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAATTgg < 2:876574/150‑1 (MQ=255) gTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACAACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTTATTCTGCAAAACaaaaaaaaaatg > 1:3871629/1‑146 (MQ=255) aGGAGCGGGCTTGCCCGCGTAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAATTGGGa < 1:4714102/150‑1 (MQ=255) ttcgCGGGCAAGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCGATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTGTTTGATTATTCAGAACACCAAAAATTggggg > 1:675645/4‑148 (MQ=255) ttcgCGGGCAAGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAATTGGGAg > 1:2255431/4‑150 (MQ=255) gCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAATTGGGAGCCt < 2:3585137/150‑1 (MQ=255) cTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAATTGGGAGCCTGCCAt < 2:2332968/150‑1 (MQ=255) ttGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTATGAAGAACAACAAAAATTGGGAGCCAGCCATg > 1:1408191/1‑150 (MQ=255) gCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAATTGGGAGCCTGCCATgtc < 2:2258518/150‑1 (MQ=255) gCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAATTGGGAGCCTGCCATgtc < 1:2180686/150‑1 (MQ=255) ccGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAATTGGGAGCCTGCCATgtcgg > 1:413155/1‑150 (MQ=255) cgcgAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAATTGGGAGCCTGCCATgtcggt > 2:3892063/1‑150 (MQ=255) cgcgAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAATTGGGAGCCTGCCATgtcggt > 1:1936995/1‑150 (MQ=255) cgcgAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAATTGGGAGCCTGCCATgtcggt < 1:3563173/150‑1 (MQ=255) gaagaaGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCAGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAATTGGGAGCCTGCCATGTCGGTCGa > 2:1686496/1‑150 (MQ=255) agaacCCAACGCCGTAGAACCAGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCAGCAGAACAACAATAATTGGGAGCCTGCCATGTCGGTCGATc < 2:677930/150‑1 (MQ=255) gaagCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAATTGGGAGCCTGCCATGTCGGTCGATcc < 2:675086/150‑1 (MQ=255) aagCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAATTTGGAGCCTGCCATGTCGGGCGATCCg > 1:2997946/1‑150 (MQ=255) agCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAATTGGGAGCCTGCCATGTCGGTCGATCCGc < 1:205634/150‑1 (MQ=255) agCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAATTGGGAGCCTGCCATGTCGGTCGATCCGc > 2:2082364/1‑150 (MQ=255) cAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAAAAATTGGGAGCCTGCCAAGTCGGTCGATCCGCcaa > 1:1807446/1‑150 (MQ=255) aaCGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAATTGGGAGCCTGCCATGTCGGTCGATCCGCaaaa > 1:1073619/1‑150 (MQ=255) aCGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAATTGGGAGCCTGCCATGTCGGTCGATCCGCaaaaa < 2:3071942/150‑1 (MQ=255) gTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTTATTTTTCATAAAAAAAATAATTTGGAGCCTGCCATGTGGGTCGATCCGGAAAAAATtct > 1:547604/1‑150 (MQ=255) gTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAATTGGGAGCCTGCCATGTCGGTCGATCCGCAAAAACTtct < 2:3370569/150‑1 (MQ=255) tGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAATTGGGAGCCTGCCATGTCGGTCGATCCGCAAAAACTTCTcc < 2:4063479/150‑1 (MQ=255) aaCCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAATTGGGAGCCTGCCATGTCGGTCGATCCGCAAAAACTTCTCcgc < 1:2625151/150‑1 (MQ=255) cTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAAAAATTGGGCGCCTGCCATGTCGGTCGCTCCGCAAAAACTTCTCCGCGaa > 1:4912474/1‑150 (MQ=255) gCGACCACATGCCCAATGGTGGAATCGTGCAACACCCTCCCCTGGTTCGGCCTGAAGGGAGGCTGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAATTGGGAGCCTGCCATGTCTGTCTATCCGCAAAAACTTCTCCGCGAACt < 1:2379147/150‑1 (MQ=255) gACCACAGGTCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTATTGATTCTGCACAACAACAATAATTGGGAGCCTGCCATGTCGGTCGATCCGCAAAAACTTCTCCGCGAACTGt < 1:877061/150‑1 (MQ=255) gACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAATTGGGAGCCTGCCATGTCGGTCGATCCGCACAAACTTCTCCGCGAACTGt > 2:1918437/1‑150 (MQ=255) accaccCGCCCAATGCAGGCAACCACCAACACCCCCCCCTGCTTCGCCCTCCACCCACGCAGTTCCAGCGGCGAAATTGATACTCCAGAACAACAATAATTCGCAGCCACCCATGTCGCTCGATCCGCAAAAACTTCTCCCCGAACtcta < 2:4675890/150‑4 (MQ=255) ccACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCTGGGGCGTTTTTGATTCTGCAGAACAACAATAATTGGGAGCCTGCCATGTCGGTCGATCCGCAAAAACTTCTCCGCGAACTGTTc < 2:2929984/150‑1 (MQ=255) gCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAATTGGGAGCCTGCCATGTCGGTCGATCCGCAAAAACTTCTCCGCGAACTGTTCGAcaca > 2:4612791/1‑150 (MQ=255) ccAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAATTGGGAGCCTGCCATGTCGGTCGAACCGCAAAAACATCTCCCCGAACTGTTCGACACAGc > 2:2431531/1‑150 (MQ=255) tggtggCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAATTGGGAGCCTGCCATGTCGGTCGATCCGCAAAAACTTCTCCGCGAACTGTTCGACACAGCCATc < 1:1286289/150‑1 (MQ=255) aTCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAATTGGGAGCCTGCCATGTCGGTCGATACGCAAAAACATCTCCGCGAACTGTTCGACACAGCCATcgccgccg > 1:3476361/1‑150 (MQ=255) tCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAATTGGGAGCCTGCCATGTCGGTCGATCCGCACAAACTTCTCCGCGAACTGTTCGACACAGCCATcgccgccgc > 2:1104151/1‑150 (MQ=255) aGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTGTTTGATTCTGCAGAACAACAATAATTGGGAGCCTGCCATGTCGGTCGATCCCCAAAAACTTCTCCGCGAACTGTTCGACACAGCCATAGCCGCCCCCCa > 1:4857400/1‑150 (MQ=255) gCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAATTGGGAGCCTGCCATGTCGGTCGATCCGCAAAAACTTCTCCGCGAACTGTTCGACACAGCCATCGCCGCCGCCCAc > 2:1014521/1‑150 (MQ=255) acacCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAAGTGGGAGCCTGCCATGTCGGTCGATCCGCAAAAACTTCTCCGCGAACTGTTCGACACAGCCCTCGCCGCCGCCCAcccc > 2:2522285/1‑150 (MQ=255) cccccGCCCCTGGTTCGGCCGGCCCGGAGGCAGTTCCAGGGGCGATTTTGAGTCGGCAGAACCACACTCCGTGGGAGCCTGCCCTGTCGGTCGAGCCGCCCCCACGTCGCCGCGAACTGGGCGACACAGCCATCGCCGCCGCCCAccccc < 2:1815808/148‑1 (MQ=255) cacCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAATTGGGAGCCTGCCATGTCGGTCGATCCGCAAAAACTTCTCCGCGAACTGTTCGACACAGCCATCGCCGCCGCCCAccccc < 1:5106908/150‑1 (MQ=255) cacCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAATTGGGAGCCTGCCATGTCGGTCGATCCGCAAAAACTTCTCCGCGAACTGTTCGACACAGCCATCGCCGCCGCCCAccccc < 2:3325433/150‑1 (MQ=255) cacCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTATGCAGAACAACAATAATTGGGAGCCTGCCATGTCGGTAGATCAGCAAAAACTTATCCGCGAACTGTTCGACACAGCCATAGCCGCCGCCCAccccc > 2:625944/1‑150 (MQ=255) cacCCGCCCCTGGTGCGGCCTGCACGGAGGCAGGTCCAGGGGCGTTTGTGATTCTGCAGACCAACCATCATTGGGAGCCTGCCATGTCGGTCGATCCGCAAAAACTTCTCCGCGAACTGTTCGACACAGCCATCGCCGCCGCCCAccccc < 2:4394213/150‑1 (MQ=255) acCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAATTGGGAGCCTGCCATGTCGGTCGATCCGCAAAAACTTCTCCGCGAACTGTTCGACACAGCCATCGCCGCCGCCCACCCCCg > 1:2476471/1‑150 (MQ=255) cccGCCCCTGGTTCGTCCTGCACGCAGGAAGTTCCAGGGGTGTTTTTGATTATGCAGAACAACAATAATTGGGAGCCTGCCATGTCGGTCGATCCGCAAAAACTTCTCCGCGAACTGTTCGACACAGCCATCGCCGCCGCCCACCCCCGt < 1:4352823/150‑1 (MQ=255) aacGCCCCTGGAACTGCCTCCGTGCAGGCCGAACCAGGGGCGTTTTTGATTCTGCAGAACAACAATAATTGGGAGCCTGCCATGTCGGTCGATCCGCAAAAACTTCTCCGCGAACTGTTCGACACAGCCATCGCCGCCGCCCACCCCCGt > 2:2310583/3‑150 (MQ=37) gCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAATTGGGAGCCTGCCATGTCGGTCGATCCGCAAAAACTTCTCCGCGAACTGTTCGACACAGCCATCGCCGCCGCCCACCCCCGTCaa > 2:3468345/1‑150 (MQ=255) gCCCCTGGATCGGCCTGCACGGAGGCAGTTCCAGTGGCGTTTTTGATTCTGCAGAACAACAATAATTGGGAGCCTGCCATGTCGGTAGATCCGCAAAAACTTCTCCGCGAACTGTTCGACACAGCCATCGCCGCCGCCCACCCCCGTCaa > 2:2934895/1‑150 (MQ=255) cccTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATCAGTGGGAGCCTGCCATGTCGGTCGATCCGCCAAAACTTCTCCGCGAACTGTTCGACACGGCCATCGCCGCCGCCCACCCCCGTCAAGt > 2:3919979/1‑150 (MQ=255) cccTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAATTGGGAGCCTGCCATGTCGGTCGATCCGCAAAAACTTCTCCGCGAACTGTTCGACACAGCCATCGCCGCCGCCCACCCCCGTCAAGt > 2:3261125/1‑150 (MQ=255) cTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTTATTATGCAGAACAACAATAATTGGGAGCCTGCCCTGTCGGTCGATCCGCAAAAACATCTACGCGAACAGTTAGACACAGCCATCGCCGCCGCCCACCCCCGTCAAGTcc > 1:3499732/1‑150 (MQ=255) tCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAATTGGGAGCCTGCCATGTCGGTCGATCCGCAAAAACTTCTCCGCGAACTGTTCGACACAGCCATCGCCGCCGCCCACCCCCGTCAAGTCCTCGaa < 2:4228757/150‑1 (MQ=255) cTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAATTGGGAGCCTGCCATGTCGGTCGATCCGCAAAAACTTCTCCGCGAACTGTTCGACACAGCCATCGCCGCCGCCCACCCCCGTCAAGTCCTCGAACCCTa < 1:4519932/150‑1 (MQ=255) tGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAATTGGGAGCCTGCCATGTCGGTCGATCCGCAAAAACTTCTCCGCGAACTGTTCGACACAGCCATCGCCGCCGCCCACCCCCGTCAAGTCCTCGAACCCTAc < 1:3821776/150‑1 (MQ=255) gCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAATTGGGAGCCTGCCATGTCGGTCGATCCGCAAAAAAATCTACGCGAACTGTTCGACACAGCCAACGCCGCCCCCCACCCCCCTCAAGTCCTAGAaaccaacc > 1:2989864/1‑150 (MQ=255) cACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAATTTGGAGCCTGCCATGTCGGTCGATCCGCAAAAACTTCTCCGCGAACTGTTCGACACAGCCATCGCCGCCGCCCACCCCCCTCAAGTCCTCGAACCCAAcca > 1:1118298/1‑149 (MQ=255) cACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAATTGGGAGCCTGCCATGTCGGTCGATCCGCAAAAACTTCTCCGCGAACTGTTCGACACAGCCATCGCCGCCGCCCACCCCCGTCAAGTCCTCGAACCCTACCt > 2:3815046/1‑150 (MQ=255) cGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAATTGGGAGCCTGCCATGTCGGTCGATCCGCAAAAACTTCTCCGCGAACTGTTCGACACAGCCATCGCCGCCGCCCACCCCCGTCAAGTCCTCGAACCCTACCTGc < 1:3997140/150‑1 (MQ=255) gAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAATTGGGAGCCTGCCATGTCGGTCGATCCGCAAAAACTTCTCCGCGAACTGTTCGACACAGCCATCGCCGCCGCCCACCCCCGTCAAGTCCTCGAACCCTACCTGccc < 2:2255431/150‑1 (MQ=255) | CTCCTACCAAAGACCGCACAATCGCTCAGAGCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGTTCGGCCTGCACGGAGGCAGTTCCAGGGGCGTTTTTGATTCTGCAGAACAACAATAATTGGGAGCCTGCCATGTCGGTCGATCCGCAAAAACTTCTCCGCGAACTGTTCGACACAGCCATCGCCGCCGCCCACCCCCGTCAAGTCCTCGAACCCTACCTGCCCGCCGAT > NC_002947/4892608‑4892904 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |