| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,355,880 | G→T | 8.3% | A69A (GCC→GCA) | pnp ← | polyribonucleotide nucleotidyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,355,880 | 0 | G | T | 8.3% | 534.8 / 26.1 | 165 | A69A (GCC→GCA) | pnp | polyribonucleotide nucleotidyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (82/69); new base T (7/7); total (89/76) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.86e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 169 total aligned reads displayed.
GAAACCACGGTGCAGACGACCTGCACTTCGTTCATGAAGCCTTCCGGGAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGCCTGACGGGCAATACGGCC > NC_002947/5355731‑5356029 | cACGGTGCAGACGACCTGCACTTCGTTCATGAAGCCTTCCGGGAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTa > 1:1322581/1‑150 (MQ=255) aCGGTGCAGACGACCTGCACTTCGTTCATGAAGCCTTCCGGGAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAg > 2:4020249/1‑150 (MQ=255) gacgacCTGCACTTCGTTCATGAAGCCTTCCGGGAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTc < 1:3521915/150‑1 (MQ=255) acgacCTGCACTTCGTTCATGAAGCCTTCCGGGAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTcc < 2:2062010/150‑1 (MQ=255) gacCTGCACTTCGTTCATGAAGCCTTCCGGGAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTg < 1:4187523/150‑1 (MQ=255) gacCTGCACTTCGTTCATGAAGCCTTCCGGGAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTg < 1:4178532/150‑1 (MQ=255) acCTGCACTTCGTTCATGAAGCCTTCCGGGAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTgg < 1:4610957/150‑1 (MQ=255) acCTGCACTTCGTTCATGAAGCCTTCCGGGAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTgg < 2:2271758/150‑1 (MQ=255) ctgcgtgtCGTTCTTGTAGCCATCAACGAAAAGCGGGCGGATCGGACGGTCGATCAGGCGCGAAACCAGAGTTTCGTTTTCGCTTGGACGACCTTCGCGCTTGAAGAAACCACCTGGGATCTTGCCAGCTGCGTAAGTCTTTTCCTGATa < 1:2971208/143‑1 (MQ=255) ctgcgtgtCGTTCTTGTAGCCATCAACGAAAAGCGGGCGGATCGGACGGTCGATCAGGCGCGAAACCAGAGTTTCGTTTTCGCTTGGACGACCTTCGCGCTTGAAGAAACCACCTGGGATCTTGCCAGCTGCGTAAGTCTTTTCCTGATa < 2:4068849/143‑1 (MQ=255) ctgcgtgtCGTTCTTGTAGCCATCAACGAAAAGCGGGCGGATCGGACGGTCGATCAGGCGCGAAACCAGAGTTTCGTTTTCGCTTGGACGACCTTCGCGCTTGAAGAAACCACCTGGGATCTTGCCAGCTGCGTAAGTCTTTTCCTGATa < 2:3807330/143‑1 (MQ=255) cTGCACTTCGTTCATGAAGCCTTCCGGGAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTa < 1:1730050/150‑1 (MQ=255) cTGCACTTCGTTCATGAAGCCTTCCGGGAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTa < 1:481119/150‑1 (MQ=255) cTGCACTTCGTTCATGAAGCCTTCCGGGAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTa < 1:3976441/150‑1 (MQ=255) tGCACTTCGTTCATGAAGCCATCCGGGAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGACAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGACACCTGGGATCTTGCCAGCGGCGAAGGTCTTTTCCTGGTAg > 2:4548324/1‑150 (MQ=255) gtgtCGTTCTTGTAGCCATCAACGAAAAGCGGGCGGATCGGACGGTCGATCAGGCGCGAAACCAGAGTTTCGTTTTCGCTTGGACGACCTTCGCGCTTGAAGAAACCACCTGGGATCTTGCCAGCTGCGTAAGTCTTTTCCTGATAGttg < 1:498736/147‑3 (MQ=255) tgtCGTTCTTGTAGCCATCAACGAAAAGCGGGCGGATCGGACGGTCGATCAGGCGCGAAACCAGAGTTTCGTTTTCGCTTGGACGACCTTCGCGCTTGAAGAAACCACCTGGGATCTTGCCAGCTGCGTAAGTCTTTTCCTGATAGttga < 1:1710888/148‑4 (MQ=255) tgtCGTTCTTGTAGCCATCAACGAAAAGCGGGCGGATCGGACGGTCGATCAGGCGCGAAACCAGAGTTTCGTTTTCGCTTGGACGACCTTCGCGCTTGAAGAAACCACCTGGGATCTTGCCAGCGGCGTAAGTCTTTTCCTGATAGttga > 2:1582952/3‑147 (MQ=255) ttCGTTCATGAAGCCTTCCGGGAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAAc > 1:4942241/1‑150 (MQ=255) ttCGTTCATGAAGCCTTCCGGGAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAAc < 2:1238668/150‑1 (MQ=255) ttCGTTCATGAAGCCTTCCGGGAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAAc > 1:2754549/1‑150 (MQ=255) ttCGTTCATGAAGCCTTCCGGGAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAAc > 2:1301089/1‑150 (MQ=255) tCATGAAGCCTTCCGGGAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACa > 1:1865252/1‑150 (MQ=255) aTGAAGCCTTCCGGGAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGc > 1:4892508/1‑150 (MQ=255) aTGAAGCCTTCCGGGAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGc > 2:541295/1‑150 (MQ=255) aTGAAGCCTTCCGGGAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGc > 2:541292/1‑150 (MQ=255) gAAGCCTTCCGGGAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCgg > 2:3214770/1‑150 (MQ=255) aGCCTTCCGGGAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGga < 1:3348745/150‑1 (MQ=255) gCCTTCCGGGAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGgaa < 2:3693730/150‑1 (MQ=255) ttCCGGGAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGgaagaa > 1:1121114/1‑150 (MQ=255) ttCCGGGAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGgaagaa > 2:4775142/1‑150 (MQ=255) ttCCGGGAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGgaagaa > 2:1425216/1‑150 (MQ=255) caacgAAAAGCGGGCGGATCGGACGGTCGATCAGGCGCGAAACCAGAGTTTCGTTTTCGCTTGGACGACCTTCGCGCTTGAAGAAACCACCTGGGATCTTGCCAGCTGCGTAAGTCTTTTCCTGATAGTTGACGGTCAGCGGGAAGaaat < 2:2932017/146‑2 (MQ=255) cGGGAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAAcc < 2:4019775/150‑1 (MQ=255) cGGGAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAAcc < 2:3343106/150‑1 (MQ=255) cGGGAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAAcc < 2:1865252/150‑1 (MQ=255) acgAAAAGCGGGCGGATCGGACGGTCGATCAGGCGCGAAACCAGAGTTTCGTTTTCGCTTGGACGACCTTCGCGCTTGAAGAAACCACCTGGGATCTTGCCAGCTGCGTAAGTCTTTTCCTGATAGTTGACGGTCAGCGGGAAGAAAtcc > 2:5078149/3‑150 (MQ=255) gAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCtt < 1:446266/150‑1 (MQ=255) gAAAAGCGGGCGGATCGGACGGTCGATCAGGCGCGAAACCAGAGTTTCGTTTTCGCTTGGACGACCTTCGCGCTTGAAGAAACCACCTGGGATCTTGCCAGCTGCGTAAGTCTTTTCCTGATAGTTGACGGTCAGCGGGAAGAAATCCtg > 1:1609826/1‑149 (MQ=255) aCAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGc < 1:3742750/150‑1 (MQ=255) aaGCGGGCGGATCGGACGGTCGATCAGGCGCGAAACCAGAGTTTCGTTTTCGCTTGGACGACCTTCGCGCTTGAAGAAACCACCTGGGATCTTGCCAGCTGCGTAAGTCTTTTCCTGATAGTTGACGGTCAGCGGGAAGAAATCCtgacc > 2:1391405/2‑146 (MQ=255) aGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTATCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCt > 2:2932558/1‑150 (MQ=255) aGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGCCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCGTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCt < 1:4497803/150‑1 (MQ=255) gCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTg < 1:2579255/150‑1 (MQ=255) cggacggaTCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTgg > 1:4676008/1‑150 (MQ=255) ggacggaTC‑GACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGAt > 1:966140/1‑150 (MQ=255) acggaTCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATc > 2:4543540/1‑150 (MQ=255) ggaTCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAg > 2:4388475/1‑150 (MQ=255) ggaTCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAg > 2:4388422/1‑150 (MQ=255) gaTCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGc < 1:2885130/150‑1 (MQ=255) aTCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGcc > 2:2426543/1‑150 (MQ=255) gACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGtt > 2:3641957/1‑150 (MQ=255) gACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGtt > 1:3719564/1‑150 (MQ=255) gACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGtt < 1:216626/150‑1 (MQ=255) gACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTC‑TTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGttt < 2:336283/150‑1 (MQ=255) gTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGgc < 1:3600246/150‑1 (MQ=255) gTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGgc < 2:2154611/150‑1 (MQ=255) tCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGgcg > 1:806879/1‑150 (MQ=255) tCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGgcg > 1:806686/1‑150 (MQ=255) gATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGcc > 1:2613649/1‑150 (MQ=255) aGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTAcc < 1:4235511/150‑1 (MQ=255) ggCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACca < 2:1136853/150‑1 (MQ=255) cgcgAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACcaca < 1:2316468/150‑1 (MQ=255) cgcgAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACcaca < 1:3831709/150‑1 (MQ=255) cgcgAGGTCAGCGTCTCGTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACcaca < 1:2737410/150‑1 (MQ=255) gAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTc > 1:1024814/1‑150 (MQ=255) aGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCa > 2:2668600/1‑150 (MQ=255) gTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCAcc > 1:4116667/1‑150 (MQ=255) tCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCa > 2:1904591/1‑150 (MQ=255) tCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCa > 2:4481867/1‑150 (MQ=255) tCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCa < 1:40444/150‑1 (MQ=255) cAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAg < 1:694281/150‑1 (MQ=255) aGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGc > 1:1985125/1‑150 (MQ=255) aGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGc > 1:1985135/1‑150 (MQ=255) gTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACg < 1:3936762/150‑1 (MQ=255) ctctTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGt < 1:2584887/150‑1 (MQ=255) tctcGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGAcgt > 1:1239912/1‑150 (MQ=255) tctcGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGAcgt > 1:3823137/1‑150 (MQ=255) ctcGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGAcgtc < 2:4934414/150‑1 (MQ=255) tcGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGAcgtcg > 2:3253063/1‑150 (MQ=255) ggAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTGTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGtt < 2:3091574/150‑1 (MQ=255) ggACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCg > 2:4954200/1‑150 (MQ=255) ttCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAAc > 2:2449200/1‑150 (MQ=255) gCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCa > 2:3436717/1‑150 (MQ=255) cTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCAc < 1:1056148/150‑1 (MQ=255) cTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCAc > 2:2118683/1‑150 (MQ=255) ttGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACg > 2:1902853/1‑150 (MQ=255) aagCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCg > 2:3322637/1‑150 (MQ=255) aCCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGc < 1:1242491/150‑1 (MQ=255) aCCTGGGATCGTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGc < 2:4128899/150‑1 (MQ=255) cTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGCCt < 2:3128345/150‑1 (MQ=255) ggATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGCCTGAc < 2:1434834/150‑1 (MQ=255) ggATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGCCTGAc < 2:1434568/150‑1 (MQ=255) aTCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGCCTGACgg > 2:1617772/1‑150 (MQ=255) tCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGCCTGACggg > 2:694112/1‑150 (MQ=255) ttGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGCCTGACGGGCa > 1:4390657/1‑150 (MQ=255) ttGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGCCTGACGGGCa > 1:3366925/1‑150 (MQ=255) tGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGCCTGACGGGCaa > 1:1370114/1‑150 (MQ=255) tGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGCCTGACGGGCaa > 1:1370051/1‑150 (MQ=255) cAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGCCTGACGGGCAATAc > 2:843891/1‑150 (MQ=255) | GAAACCACGGTGCAGACGACCTGCACTTCGTTCATGAAGCCTTCCGGGAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGCCTGACGGGCAATACGGCC > NC_002947/5355731‑5356029 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |