| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,511,424 | G→C | 8.3% | G353G (GGG→GGC) | urtA → | urea ABC transporter substrate‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,511,424 | 0 | G | C | 8.3% | 628.0 / 35.6 | 193 | G353G (GGG→GGC) | urtA | urea ABC transporter substrate‑binding protein |
| Reads supporting (aligned to +/- strand): ref base G (79/98); new base C (10/6); total (89/104) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.97e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 204 total aligned reads displayed.
TACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCGAGCAGCCGCTGCGGGCGCAGCCATG > NC_002947/5511275‑5511573 | tACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCggg > 1:797818/1‑150 (MQ=255)tACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCggg > 1:3303319/1‑150 (MQ=255) aCGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGc < 1:3747801/150‑1 (MQ=255) gccaaggccaagGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAACGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCag > 2:4371505/1‑150 (MQ=255) ccaaggccaaggGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCaga < 2:2766054/150‑1 (MQ=255) ccaaggccaaggGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGACCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCaga < 2:3172010/150‑1 (MQ=255) caaggccaaggGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCagag > 1:2337084/1‑150 (MQ=255) aaggccaaggGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGc > 2:3683388/1‑150 (MQ=255) caaggGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGa > 2:221912/1‑150 (MQ=255) caaggGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGa < 2:327775/150‑1 (MQ=255) aaggGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAg < 2:2189176/150‑1 (MQ=255) aaggGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAg < 2:3416631/150‑1 (MQ=255) gggCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGgc > 1:1831535/1‑150 (MQ=255) gggCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGgc < 2:3637441/150‑1 (MQ=255) ggCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCTCTGCCCGGCCAGTGCTTCGCggac < 2:3698417/150‑3 (MQ=255) ggCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGgcg > 2:18183/1‑150 (MQ=255) cTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCg > 2:2851892/1‑150 (MQ=255) tGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGt > 2:443982/1‑150 (MQ=255) cAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCgg < 1:204714/150‑1 (MQ=255) cAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCgg < 1:2924362/150‑1 (MQ=255) aGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGa < 1:1107623/150‑1 (MQ=255) aGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGa < 1:2646400/150‑1 (MQ=255) ggCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGAc > 2:4954788/1‑150 (MQ=255) cGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCAt < 2:1776154/150‑1 (MQ=255) gTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATg > 1:3619360/1‑150 (MQ=255) tGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATgg < 2:4135098/150‑1 (MQ=255) cAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACaa < 1:571641/150‑1 (MQ=255) cAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACaa > 2:23668/1‑150 (MQ=255) cAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACaa > 1:4722436/1‑150 (MQ=255) aCGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGa < 1:410311/150‑1 (MQ=255) aCGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGa < 1:2517570/150‑1 (MQ=255) aCGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGa > 1:3823714/1‑150 (MQ=255) aCGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGa < 1:1585436/150‑1 (MQ=255) cccATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGaccaac < 1:3919973/150‑1 (MQ=255) cccATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGaccaac < 2:2211850/150‑1 (MQ=255) cccATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGaccaac < 2:623710/150‑1 (MQ=255) cATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGaccaacca > 1:3583501/1‑150 (MQ=255) aTGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAaccac > 1:375973/1‑150 (MQ=255) aTGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAaccac > 2:4669748/1‑150 (MQ=255) ggaGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAaccaccac < 2:2150003/148‑1 (MQ=255) aaGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAaccaccacc > 1:4180161/1‑150 (MQ=255) aGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCt > 2:3131145/1‑150 (MQ=255) cTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACaa < 1:3254542/150‑1 (MQ=255) gTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCg > 1:4500257/1‑150 (MQ=255) tGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCgg < 2:1807102/150‑1 (MQ=255) gggCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGt < 2:490050/150‑1 (MQ=255) gCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGtga < 1:1240494/150‑1 (MQ=255) gCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGtga > 2:3669037/1‑150 (MQ=255) cATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGtgat < 2:1620598/150‑1 (MQ=255) tCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGtgatga > 2:4832463/1‑150 (MQ=255) acaTGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCg > 1:5106153/1‑150 (MQ=255) acaTGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCg > 1:2048854/1‑150 (MQ=255) aTGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGc < 2:2968027/150‑1 (MQ=255) tgtgGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCg < 1:657905/150‑1 (MQ=255) gtgGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCga < 2:4573753/150‑1 (MQ=255) ggCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGAt > 1:2096089/1‑150 (MQ=255) gCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGAtt < 2:4233388/150‑1 (MQ=255) cccAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCTGAGCTTCGCGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTc > 1:4828357/1‑150 (MQ=255) ccAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCa < 2:4773216/150‑1 (MQ=255) ccAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCa < 2:4075147/150‑1 (MQ=255) ccAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCa < 2:1278848/150‑1 (MQ=255) cAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAg < 2:1479568/150‑1 (MQ=255) cAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAg < 1:4973327/150‑1 (MQ=255) cAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAg < 2:122399/150‑1 (MQ=255) cAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAg < 2:122203/150‑1 (MQ=255) aGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAgg > 1:2192361/1‑150 (MQ=255) ggCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGATTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGa < 1:4520244/150‑1 (MQ=255) gCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGAt < 1:1573265/150‑1 (MQ=255) tGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAg > 1:2888307/1‑145 (MQ=255) tGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAg < 2:2888307/145‑1 (MQ=255) tGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGa > 2:3941532/1‑150 (MQ=255) gagaAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGc > 2:798507/1‑150 (MQ=255) agaAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGcc > 1:4884013/1‑150 (MQ=255) ccAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCa > 1:3123700/1‑150 (MQ=255) cAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAg > 2:770995/1‑150 (MQ=255) tCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCgtg < 1:4335466/150‑1 (MQ=255) aCTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCgtggtg > 2:4498582/1‑150 (MQ=255) cTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCGGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGgtgt < 1:5018941/150‑1 (MQ=255) tGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGtgtg > 2:1110506/1‑150 (MQ=255) gTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCgtg > 1:2261833/1‑141 (MQ=255) gTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCgtg < 2:2261833/141‑1 (MQ=255) gACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAAcc > 2:1941179/1‑150 (MQ=255) gACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAAcc > 2:2532820/1‑150 (MQ=255) cAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCGa < 2:1408959/150‑1 (MQ=255) cAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCGa < 1:1526081/150‑1 (MQ=255) cAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCGa < 1:1526145/150‑1 (MQ=255) gTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCGagcag > 1:4537989/1‑150 (MQ=255) gTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCGagcag > 2:4264763/1‑150 (MQ=255) ctcgAAGCTCTGCCCGGCCAGTGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCGAGCAGCCg > 2:3749135/3‑150 (MQ=255) ctcgAAGCTCTGCCCGGCCAGTGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCGAGCAGCCg > 1:4015884/3‑150 (MQ=255) tcgAAGCTCTGCCCGGCCAGTGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCGAGCAGCCGc > 2:4530673/2‑150 (MQ=255) gAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCGAGCAGCCg > 2:1030986/1‑147 (MQ=255) gAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCGAGCAGCCg < 1:1030986/147‑1 (MQ=255) aaGCTCTGCCCGGCCAGTGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCGAGCAGCCGCTGc > 1:4948333/1‑150 (MQ=255) cTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCGAGCAGCCGCTGCGGgcg > 1:4712333/1‑150 (MQ=255) gCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGCCGGCCAGTTCAGCGTGGTGTGGGAAACCGAGCAGCCGCTGCGGGCGCAg < 2:3114604/150‑1 (MQ=255) cGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCGAGCAGCCGCTGCGGGCGCAGcc > 1:693616/1‑150 (MQ=255) ggCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCGAGCAGCCGCTGCGGGCGCAGCCAt > 2:4374170/1‑150 (MQ=255) ggCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCGAGCAGCCGCTGCGGGCGCAGCCAt < 2:3303319/150‑1 (MQ=255) gCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCGAGCAGCCGCTGCGGGCGCAGCCATg < 2:1913695/150‑1 (MQ=255) | TACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCGAGCAGCCGCTGCGGGCGCAGCCATG > NC_002947/5511275‑5511573 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |