Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,634,802 G→A 10.1% V787M (GTG→ATG) ‡ putA → proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,634,8020GA10.1% 502.5 / 34.8 179V787M (GTG→ATG) ‡putAproline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
Reads supporting (aligned to +/- strand):  ref base G (75/85);  new base A (10/8);  total (86/93)
Fisher's exact test for biased strand distribution p-value = 6.20e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 182 total aligned reads displayed.

CATTGCCGAAGTGCGTGAAGCCGTGGACTTCCTGCGCTACTACGCGGTGCAGGCACGTAACGACTTCAGCAACGACGCCCACCGCCCACTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCCTGCTGCTGGAAGCTGGCATCCCAGAAGGCGTGCTGCAGCTGCTGCCGGGCCGCGGTGAAACTGTC  >  NC_002947/5634654‑5634951
                                                                                                                                                    |                                                                                                                                                     
cATTGCCGAAGTGCGTGAAGCCGTGGACTTCCTGCGCTACTACGCGGTGCAGGCACGTAACGACTTCAGCAACGACGCCCACCGCCCACTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGt                                                                                                                                                      <  2:3706756/150‑1 (MQ=255)
cATTGCCGAAGTGCGTGAAGCCGTGGACTTCCTGCGCTACTACGCGGTGCAGGCACGTAACGACTTCAGCAACGACGCCCACCGCCCACTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGt                                                                                                                                                      >  2:72586/1‑150 (MQ=255)
    gCCGAAGTGCGTGAAGCCGTGGACTTCCTGCGCTACTACGCGGTGCAGGCACGTAACGACTTCAGCAACGACGCCCACCGCCCACTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGcc                                                                                                                                                  <  2:812153/150‑1 (MQ=255)
      cGAAGTGCGTGAAGCCGTGGACTTCCTGCGCTACTACGCGGTGCAGGCACGTAACGACTTCAGCAACGACGCCCACCGCCCACTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGc                                                                                                                                                >  2:2619691/1‑150 (MQ=255)
            gCGTGAAGCCGTGGACTTCCTGCGCTACTACGCGGTGCAGGCACGTAACGACTTCAGCAACGACGCCCACCGCCCACTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCt                                                                                                                                          <  2:4480187/150‑1 (MQ=255)
              gTGAAGCCGTGGACTTCCTGCGCTACTACGCGGTGCAGGCACGTAACGACTTCAGCAACGACGCCCACCGCCCACTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTgg                                                                                                                                        >  2:1040704/1‑150 (MQ=255)
               tGAAGCCGTGGACTTCCTGCGCTACTACGCGGTGCAGGCACGTAACGACTTCAGCAACGACGCCCACCGCCCACTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGc                                                                                                                                       >  2:1717184/1‑150 (MQ=255)
                gAAGCCGTGGACTTCCTGCGCTACTACGCGGTGCAGGCACGTAACGACTTCAGCAACGACGCCCACCGCCCACTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCt                                                                                                                                      <  1:2022694/150‑1 (MQ=255)
                   gCCGTGGACTTCCTGCGCTACTACGCGGTGCAGGCACGTAACGACTTCAGCAACGACGCCCACCGCCCACTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGcc                                                                                                                                   >  1:4759108/1‑150 (MQ=255)
                    ccGTGGACTTCCTGCGCTACTACGCGGTGCAGGCACGTAACGACTTCAGCAACGACGCCCACCGCCCACTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCg                                                                                                                                  <  2:2293379/150‑1 (MQ=255)
                    ccGTGGACTTCCTGCGCTACTACGCGGTGCAGGCACGTAACGACTTCAGCAACGACGCCCACCGCCCACTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCg                                                                                                                                  <  1:54246/150‑1 (MQ=255)
                         gACTTCCTGCGCTACTACGCGGTGCAGGCACGTAACGACTTCAGCAACGACGCCCACCGCCCACTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAAc                                                                                                                             >  1:4523072/1‑150 (MQ=255)
                            ttCCTGCGCTACTACGCGGTGCAGGCACGTAACGACTTCAGCAACGACGCCCACCGCCCACTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCg                                                                                                                          >  2:2208002/1‑150 (MQ=255)
                              ccTGCGCTACTACGCGGTGCAGGCACGTAACGACTTCAGCAACGACGCCCACCGCCCACTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGt                                                                                                                        <  2:3132480/150‑1 (MQ=255)
                               cTGCGCTACTACGCGGTGCAGGCACGTAACGACTTCAGCAACGACGCCCACCGCCCACTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTa                                                                                                                       <  1:1980746/150‑1 (MQ=255)
                                tGCGCTACTACGCGGTGCAGGCACGTAACGACTTCAGCAACGACGCCCACCGCCCACTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTAc                                                                                                                      >  1:3778457/1‑150 (MQ=255)
                                  cgcTACTACGCGGTGCAGGCACGTAACGACTTCAGCAACGACGCCCACCGCCCACTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTg                                                                                                                    <  1:3706165/150‑1 (MQ=255)
                                  cgcTACTACGCGGTGCAGGCACGTAACGACTTCAGCAACGACGCCCACCGCCCACTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTg                                                                                                                    <  1:1871227/150‑1 (MQ=255)
                                  cgcTACTACGCGGTGCAGGCACGTAACGACTTCAGCAACGACGCCCACCGCCCACTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGAAGCCCTGGCTGCCGGCAACCCGGTACTg                                                                                                                    <  1:2598332/150‑1 (MQ=255)
                                   gcTACTACGCGGTGCAGGCACGTAACGACTTCAGCAACGACGCCCACCGCCCACTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTgg                                                                                                                   >  1:1550655/1‑150 (MQ=255)
                                    ctactaCGCGGTGCAGGCACGTAACGACTTCAGCAACGACGCCCACCGCCCACTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGc                                                                                                                  >  2:4131838/1‑150 (MQ=255)
                                     tactacGCGGTGCAGGCACGTAACGACTTCAGCAACGACGCCCACCGCCCACTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGcc                                                                                                                 >  1:1568793/1‑150 (MQ=255)
                                       ctacGCGGTGCAGGCACGTAACGACTTCAGCAACGACGCCCACCGCCCACTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCaa                                                                                                               <  2:2539369/150‑1 (MQ=255)
                                        tacGCGGTGCAGGCACGTAACGACTTCAGCAACGACGCCCACCGCCCACTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAg                                                                                                              >  2:570645/1‑150 (MQ=255)
                                        tacGCGGTGCAGGCACGTAACGACTTCAGCAACGACGCCCACCGCCCACTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAg                                                                                                              >  1:1403784/1‑150 (MQ=255)
                                             ggTGCAGGCACGTAACGACTTCAGCAACGACGCCCACCGCCCACTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGc                                                                                                         <  1:5063066/150‑1 (MQ=255)
                                                gCAGGCACGTAACGACTTCAGCAACGACGCCCACCGCCCACTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGa                                                                                                      <  2:474484/150‑1 (MQ=255)
                                                 cAGGCACGTAACGACTTCAGCAACGACGCCCACCGCCCACTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAg                                                                                                     <  1:4962001/150‑1 (MQ=255)
                                                 cAGGCACGTAACGACTTCAGCAACGACGCCCACCGCCCACTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAg                                                                                                     >  1:4227094/1‑150 (MQ=255)
                                                  aGGCACGTAACGACTTCAGCAACGACGCCCACCGCCCACTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGc                                                                                                    <  2:3271455/150‑1 (MQ=255)
                                                  aGGCACGTAACGACTTCAGCAACGACGCCCACCGCCCACTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGc                                                                                                    >  2:2814350/1‑150 (MQ=255)
                                                   ggCACGTAACGACTTCAGCAACGACGCCCACCGCCCACTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCa                                                                                                   >  2:553531/1‑150 (MQ=255)
                                                   ggCACGTAACGACTTCAGCAACGACGCCCACCGCCCACTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCa                                                                                                   >  1:3743860/1‑150 (MQ=255)
                                                    gCACGTAACGACTTCAGCAACGACGCCCACCGCCCACTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCaa                                                                                                  >  1:4299665/1‑150 (MQ=255)
                                                         tAACGACTTCAGCAACGACGCCCACCGCCCACTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAAcccc                                                                                             >  2:1267156/1‑150 (MQ=255)
                                                          aaCGACTTCAGCAACGACGCCCACCGCCCACTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCa                                                                                            >  1:467200/1‑150 (MQ=255)
                                                             gACTTCAGCAACGACGCCCACCGCCCACTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGcc                                                                                                                 >  2:1562592/1‑126 (MQ=255)
                                                             gACTTCAGCAACGACGCCCACCGCCCACTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTg                                                                                         >  2:3649632/1‑150 (MQ=255)
                                                              aCTTCAGCAACGACGCCCACCGCCCACTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGa                                                                                        <  2:2986735/150‑1 (MQ=255)
                                                                ttCAGCAACGACGCCCACCGCCCACTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATc                                                                                      >  1:3122268/1‑150 (MQ=255)
                                                                   aGCAACGACGCCCACCGCCCACTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATcgcc                                                                                   <  2:3125392/150‑1 (MQ=255)
                                                                    gCAACGACGCCCACCGCCCACTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATcgccg                                                                                  <  2:907199/150‑1 (MQ=255)
                                                                          acgCCCACCGCCCACTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAgg                                                                            <  1:4017506/150‑1 (MQ=255)
                                                                            gcccaccgcccacTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGcc                                                                          >  2:3437117/1‑150 (MQ=255)
                                                                              ccaccgcccccGGGGTCCTGTGGTGTGCATCAGCCCCTGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGGGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCCCTGCTCGCCGCCCCGGCCGt                                                                        <  2:3473078/150‑1 (MQ=255)
                                                                              ccaccgcccacTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGt                                                                        >  1:960160/1‑150 (MQ=255)
                                                                                   gcccacTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGcc                                                                   >  1:2809872/1‑150 (MQ=255)
                                                                                    cccacTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCct                                                                  >  1:2481290/1‑150 (MQ=255)
                                                                                    cccacTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCct                                                                  <  2:853219/150‑1 (MQ=255)
                                                                                       acTTGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCctgct                                                               >  1:2680576/1‑150 (MQ=255)
                                                                                        cTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCctgctg                                                              <  2:196359/150‑1 (MQ=255)
                                                                                        cTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCctgctg                                                              <  2:4557949/150‑1 (MQ=255)
                                                                                         tGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCctgctgc                                                             <  1:3628744/150‑1 (MQ=255)
                                                                                         ggggTCCGGGGGGGGGCATCAGCCCCTGGACCGTCCCGCTGGCGATCGTCACCGGCCAGGGGGCCGCAGCCCGGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCctgctgc                                                             <  2:4002969/149‑1 (MQ=255)
                                                                                           ggTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCctgctgctg                                                           <  2:960160/150‑1 (MQ=255)
                                                                                           ggTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCctgctgctg                                                           >  2:4864242/1‑150 (MQ=255)
                                                                                               cTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGTCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCCTGCTGCTGGAAg                                                       >  1:4051587/1‑150 (MQ=255)
                                                                                               cTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCCTGCTGCTGGAAg                                                       >  2:2637233/1‑150 (MQ=255)
                                                                                                 gtggtgTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCCTGCTGCTGGAAGCt                                                     >  2:1271318/1‑150 (MQ=255)
                                                                                                  tggtgTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCCTGCTGCTGGAAGCTg                                                    <  2:1335368/150‑1 (MQ=255)
                                                                                                  tggtgTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCCTGCTGCTGGAAGCTg                                                    <  2:782071/150‑1 (MQ=255)
                                                                                                    gtctgtaTCAGCCCATGGAGCTTCCCGCTGGCGATCTTCACCGGCCAGATTGCAGCAGCACTTGTTGCTGGCAATCCGGTTCTGGCAAAGCCTGCCGAAGAAACCCCGCTGATTGCAGCGCAGGGCGTTCGCATTCTGCACGATGCTGGc                                                  >  1:606938/7‑150 (MQ=255)
                                                                                                    gtctgtaTCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGATTGCAGCAGCACTTGTTGCTGGCAATCCGGTTCTGGCAAAGCCTGCCGAAGAAACCCCGCTGATTGCAGCGCAGGGCGTTCGCATTCTGCACGATGCTGGc                                                  >  1:2861139/7‑150 (MQ=255)
                                                                                                       tgtaTCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGATTGCAGCAGCACTTGTTGCTGGCAATCCGGTTCTGGCAAAGCCTGCCGAAGAAACCCCGCTGATTGCAGCGCAGGGCGTTCGCATTCTGCACGATGCTGGCAtt                                               >  2:1486312/4‑149 (MQ=255)
                                                                                                         cATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCGACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCCTGCTGCTGGAAGCTGGCATccc                                             <  1:3273196/150‑1 (MQ=255)
                                                                                                          aTCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCCTGCTGCTGGAAGCTGGCATCCCa                                            <  1:4470271/150‑1 (MQ=255)
                                                                                                          aTCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCCTGCTGCTGGAAGCTGGCATCCCa                                            >  1:4176707/1‑150 (MQ=255)
                                                                                                          aTCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGATTGCAGCAGCACTTGTTGCTGGCAATCCGGTTCTGGCAAAGCCTGCCGAAGAAACCCCGCTGATTGCAGCGCAGGGCGTTCGCATTCTGCACGATGCTGGCATtcct                                            >  1:1241454/1‑149 (MQ=255)
                                                                                                            cAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGATTGCAGCAGCACTTGTTGCTGGCAATCCGGTTCTGGCAAAGCCTGCCGAAGAAACCCCGCTGATTGCAGCGCAGGGCGTTCGCATTCTGCACGATGCTGGCATtcctgc                                          <  2:3750790/150‑4 (MQ=255)
                                                                                                             aGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCCTGCTGCTGGAAGCTGGCATCCCAGaa                                         <  2:2096776/150‑1 (MQ=255)
                                                                                                             aGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCCTGCTGCTGGAAGCTGGCATCCCAGaa                                         <  1:3437117/150‑1 (MQ=255)
                                                                                                             aGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGATTGCAGCAGCACTTGTTGCTGGCAATCCGGTTCTGGCAAAGCCTGCCGAAGAAACCCCGCTGATTGCAGCGCAGGGCGTTCGCATTCTGCACGATGCTGGCATtcctgcc                                         <  1:4747502/150‑5 (MQ=255)
                                                                                                                ccATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCCTGCTGCTGGAAGCTGGCATCCCAGAAGGc                                      <  1:4244491/150‑1 (MQ=255)
                                                                                                                ccATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCCTGCTGCTGGAAGCTGGCATCCCAGAAGGc                                      <  1:2404068/150‑1 (MQ=255)
                                                                                                                ccATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCCTGCTGCTGGAAGCTGGCATCCCAGAAGGc                                      <  2:4591389/150‑1 (MQ=255)
                                                                                                                ccATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCCTGCTGCTGGAAGCTGGCATCCCAGAAGGc                                      <  1:4781860/150‑1 (MQ=255)
                                                                                                                ccATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGATTGCAGCAGCACTTGTTGCTGGCAATCCGGTTCTGGCAAAGCCTGCCGAAGAAACCCCGCTGATTGCAGCGCAGGGCGTTCGCATTCTGCACGATGCTGGCATtcctgccgat                                      >  1:975042/1‑143 (MQ=255)
                                                                                                                 cATGGAACTTCCTGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCCTGCTGCTGGAAGCTGGCATCCCAGAAGGCg                                     >  2:4350901/1‑150 (MQ=255)
                                                                                                                  aTGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCCTGCTGCTGGAAGCTGGCATCCCAGAAGGCGt                                    <  2:4401554/150‑1 (MQ=255)
                                                                                                                  aTGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCCTGCTGCTGGAAGCTGGCATCCCAGAAGGCGt                                    >  2:2906232/1‑150 (MQ=255)
                                                                                                                  aTGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCCTGCTGCTGGAAGCTGGCATCCCAGAAGGCGt                                    >  1:4301502/1‑150 (MQ=255)
                                                                                                                    ggAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCCTGCTGCTGGAAGCTGGCATCCCAGAAGGCGtgc                                  <  1:965205/150‑1 (MQ=255)
                                                                                                                      aaCTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCCTGCTGCTGGAAGCTGGCATCCCAGAAGGCGtgctg                                <  1:2592922/150‑1 (MQ=255)
                                                                                                                          tCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCCTGCTGCTGGAAGCTGGCATCCCAGAAGGCGTGCTGCAgc                            <  2:882136/150‑1 (MQ=255)
                                                                                                                           cccGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCCTGCTGCTGGAAGCTGGCATCCCAGAAGGCGTGCTGCAgct                           <  1:1259877/150‑1 (MQ=255)
                                                                                                                               cTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCCTGCTGCTGGAAGCTGGCATCCCAGAAGGCGTGCTGCAGctgctg                       >  1:255452/1‑150 (MQ=255)
                                                                                                                                   cGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCCTGCTGCTGGAAGCTGGCATCCCAGAAGGCGTGCTGCAGCTGCTGCCgg                   <  1:1834118/150‑1 (MQ=255)
                                                                                                                                    gATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCCTGCTGCTGGAAGCTGGCATCCCAGAAGGCGTGCTGCAGCTGCTGCCggg                  >  1:3245667/1‑150 (MQ=255)
                                                                                                                                       cTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTgg                                                                                                                   <  1:3349053/50‑1 (MQ=255)
                                                                                                                                       cTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTgg                                                                                                                   >  2:3349053/1‑50 (MQ=255)
                                                                                                                                        ttCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCCTGCTGCTGGAAGCTGGCATCCCAGAAGGCGTGCTGCAGCTGCTGCCGGGCcgc              <  1:2269900/150‑1 (MQ=255)
                                                                                                                                        ttCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCCTGCTGCTGGAAGCTGGCATCCCAGAAGGCGTGCTGCAGCTGCTGCCGGGCcgc              >  1:1306239/1‑150 (MQ=255)
                                                                                                                                           tgcGGCCACCTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCCTGCTGCTGGAAGCTGGCATCCCAGAAGGCGTGCTGCAGCTGCTGCCGGGCCGCGGt           >  2:4733025/3‑150 (MQ=255)
                                                                                                                                           aCCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCCTGCTGCTGGAAGCTGGCATCCCAGAAGGCGTGCTGCAGCTGCTGCCGGGCCGCGGt           <  1:2328557/150‑1 (MQ=255)
                                                                                                                                              ggCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCCTGCTGCTGGAAGCTGGCATCCCAGAAGGCGTGCTGCAGCTGCTGCCGGGCCGCGGTGaa        <  2:1573634/150‑1 (MQ=255)
                                                                                                                                               gCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCCTGCTGCTGGAAGCTGGCATCCCAGAAGGCGTGCTGCAGCTGCTGCCGGGCCGCGGTGaaa       <  1:4350901/150‑1 (MQ=255)
                                                                                                                                               gCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCCTGCTGCTGGAAGCTGGCATCCCAGAAGGCGTGCTGCAGCTGCTGCCGGGCCGCGGTGaaa       <  1:1717184/150‑1 (MQ=255)
                                                                                                                                                    gTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCACGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCCTGCTGCTGGAAGCTGGCATCCCAGAAGGCGTGCTGCAGCTGCTGCCGGGCCGCGGTGAAACTGTc  <  2:2346269/150‑1 (MQ=255)
                                                                                                                                                    gTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCCTGCTGCTGGAAGCTGGCATCCCAGAAGGCGTGCTGCAGCTGCTGCCGGGCCGCGGTGAAACTGTc  >  2:1134314/1‑150 (MQ=255)
                                                                                                                                                    gTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCCTGCTGCTGGAAGCTGGCATCCCAGAAGGCGTGCTGCAGCTGCTGCCGGGCCGCGGTGAAACTGTc  >  1:572917/1‑150 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
CATTGCCGAAGTGCGTGAAGCCGTGGACTTCCTGCGCTACTACGCGGTGCAGGCACGTAACGACTTCAGCAACGACGCCCACCGCCCACTGGGTCCTGTGGTGTGCATCAGCCCATGGAACTTCCCGCTGGCGATCTTCACCGGCCAGGTGGCCGCAGCCCTGGCTGCCGGCAACCCGGTACTGGCCAAGCCTGCCGAGCAAACCCCACTGATCGCCGCCCAGGCCGTGCGCCTGCTGCTGGAAGCTGGCATCCCAGAAGGCGTGCTGCAGCTGCTGCCGGGCCGCGGTGAAACTGTC  >  NC_002947/5634654‑5634951

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: