| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,726,259 | T→A | 14.6% | intergenic (‑183/+111) | PP_5024 ← / ← opgH | amino acid ABC transporter substrate‑binding protein/glucans biosynthesis glucosyltransferase H |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,726,259 | 0 | T | A | 14.6% | 218.3 / 4.4 | 96 | intergenic (‑183/+111) | PP_5024/opgH | amino acid ABC transporter substrate‑binding protein/glucans biosynthesis glucosyltransferase H |
| Reads supporting (aligned to +/- strand): ref base T (26/50); new base A (12/2); total (41/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.25e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 101 total aligned reads displayed.
TTATTGTGTTGGCACGGCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGG > NC_002947/5726110‑5726408 | ttATTGTGTTGGCACGGCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGAACCCGCTCCt < 2:4992165/150‑1 (MQ=255) aTTGTGTTGGCACGGCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGAACCCGCTCCTAc < 1:535875/150‑1 (MQ=255) gtgtTGGCACGGCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGAACCCGCTCCTACAAg < 1:4653518/150‑1 (MQ=255) gtgtTGGCACGGCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTGAGGCCAAAAAGCTTCGCGG‑GTGAACCCGCTCCTACAAg < 1:2963729/150‑1 (MQ=255) tgtTGGCACGGCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGAACCCGCTCCTACAAgg > 1:3202956/1‑150 (MQ=255) ttGGCACGGCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGAACCCGCTCCTACAAGGGc < 2:2672374/150‑1 (MQ=255) ttGGCACGGCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGAACCCGCTCCTACAAGGGc < 2:2672242/150‑1 (MQ=255) ggCACGGCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGCGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTGAGGCCAAAAAGCTTCGCGG‑GTGAACCCGCTCCTACAAGGGCAt < 1:452334/150‑1 (MQ=255) ggCACGGCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGAACCCGCTCCTACAAGGGCAt < 2:91134/150‑1 (MQ=255) gCACGGCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGAACCCGCTCCTACAAGGGCAtg < 2:2161221/150‑1 (MQ=255) gCACGGCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGAACCCGCTCCTACAAGGGCAtg < 1:2086362/150‑1 (MQ=255) gCACGGCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGAACCCCCGCCAAAAAGGGCaag > 2:243890/1‑148 (MQ=255) gCACGGCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTCGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGAACCCGCTCCTACAAGGGCAtg < 1:671595/150‑1 (MQ=255) cACGGCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGAACCCGCTCCTACAAGGGCAtgt < 2:2293500/150‑1 (MQ=255) cACGGCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGAACCCGCTCCTACAAGGGCAtgt < 1:5094718/150‑1 (MQ=255) aCGGCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGTACCCGCACCAACAAGGGCCtgtt > 1:1239352/1‑149 (MQ=255) aCGGCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGAACCCGCTCCTACAAgggatacac < 2:2708865/150‑7 (MQ=255) aCGGCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGAACCCGCTCCTACAAGGGCAt > 1:443853/1‑147 (MQ=255) aCGGCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGAACCCGCTCCTACAAGGGCAt < 2:443853/147‑1 (MQ=255) aCGGCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGAAACCCCACCAACAAGGGCAggtg > 2:1321815/1‑150 (MQ=255) ggCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGAACCCGCTCCTACAAGGGCATGTGTa < 2:3202956/150‑1 (MQ=255) ggcGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGAACCCGCTCCTACAAGGGCATGTGTAt < 2:3174269/148‑1 (MQ=255) gCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCGCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGAACCCGCTCCTACAAGGGCATGTGTAt < 2:1733281/150‑1 (MQ=255) gCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCGAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGAACCCGCTCCTACAAGGGCATGTGTAt < 2:1733167/150‑1 (MQ=255) gTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGAACCCGCTCCTACAAGGGCATGTGTAT‑ccc < 2:1062106/150‑1 (MQ=255) aCTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTg < 2:2857202/150‑1 (MQ=255) aCTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTg < 1:2272415/150‑1 (MQ=255) cTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTgg < 2:4631436/150‑1 (MQ=255) ggCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTa < 2:687989/150‑1 (MQ=255) gCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGATAGGCCAAAAAGCTTCGCGG‑GTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAg < 1:3510442/150‑1 (MQ=255) ccGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAgg < 1:4871180/150‑1 (MQ=255) cGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGa < 2:4313177/150‑1 (MQ=255) cGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGAACCCGCTCCAACAAGGGCCTGTGTAT‑CCCggggggga > 1:3305121/1‑145 (MQ=255) cGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGAAACCCCTACAAAAAGGGCAAGTGTAT‑CCCAGGTAgtg > 1:3305166/1‑148 (MQ=255) cGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGAAACCCCGCCAACAAGGGCATGTGTAT‑ACCGGGTAGGa > 1:3305088/1‑150 (MQ=255) aaGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGc < 2:1422353/150‑1 (MQ=255) gCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCgg < 2:1141541/150‑1 (MQ=255) gCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGCTTCGGCCAAAAAGCTTCGCGG‑GTGAACCCGCTCCTACACGGGCATGTGTAT‑CCCTGGTAGGAGCgg < 1:1459437/150‑1 (MQ=255) cgtcgtATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCggg < 1:4563772/150‑1 (MQ=255) ggAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAATGCTTCGCGG‑GTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGGAGGAGCGGGTTCACCcgc > 2:2981538/1‑150 (MQ=255) ggATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GGGGACCCCCGCCGACCAGGGCCGGTGTAT‑ACCGGGGGGGGGCGGGTTCACCcccggcgag > 2:57119/1‑145 (MQ=255) ggATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GGGAACCCCCGCCAACAACGGCAGGTGTAT‑CCCGGGGAGGAGCGGGTGCACCcccgccgcg > 2:4791119/1‑145 (MQ=255) tGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGTAACCCCGCCAACAAAGGCATGTGTAT‑AACAGGTAGGAGCGGGTTGAACCCCGACGAGGcc > 1:3213178/1‑150 (MQ=255) gCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCTGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGccc < 2:300291/150‑1 (MQ=255) cTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGAACCCGCGCCTACAAGGGCATGTGTAT‑CCCGGGTAGGAGCGGGGTCACCCGCGAAGAGGCCCg > 2:1185341/1‑150 (MQ=255) taccGCTTGGGGGCCGGTGCACTTAGCGCCGCTGGGGGATTTTG‑TGGCCCAATTGGTGGGTTTTGGCCAAAAATGTTCGGGGTGTCACCCGGCACCCACCCGGGCTTGTTTAT‑CCGTGTTTGGCGGGGGTACACCCGCGAAGAGGCCCgg < 2:1730554/147‑1 (MQ=255) aTGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGTACCCGCACCTAAAACGGGAAGTGTAT‑ACCGGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATgc > 1:3779514/1‑150 (MQ=255) aTGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGGACCCCCACCAACAACGGCATGTGTAT‑CCCGGGGAGGAGCGGGTTGACCCGCGCAGAGGCCCGGGCATgc > 1:3779513/1‑150 (MQ=255) ccGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGTAACCGCTCCTACAAGGGCATGTGTAT‑CCCTGGGAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTa > 2:419851/1‑150 (MQ=255) tGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GGGAAACCGCGCCAACAAAGGCATGTGTAT‑CCCGGGGGGGAGCCGGTTCACCCGCGAAGTGGCCCGGGCATGCGcccccgtggg > 1:366434/1‑144 (MQ=255) gACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCg > 2:4618184/1‑150 (MQ=255) ccctcgcgccgccGGGGGACTTTGTGGGCAAAAATGCGGGGTTTAGGCAAAAAAGCTTCGGGG‑GTGAACCCGCTCCAACACGGGATTGTGTAG‑CCCGGGTCGGAGCGGGTACACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCgg < 2:618191/143‑1 (MQ=255) cccTAGCGCCGCAGGGGGACTTTTTTGGCCAAATTGCGGGGTTTTGGCCAAAAAGCTTCGCGG‑GTGAACCCGCTCCTACATGGGCATGTTTAG‑CCCTGGTAGGCGGGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCgg < 2:2653479/149‑1 (MQ=38) ctcgcgCCGCAGGGGGACTTTGTTGGCCAAAAGGCGGGGGTTCGGCCAAAAAGCTTCGCGG‑GTGACCCCGCTCCTACCCGGGCATGTGTAG‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGt < 2:4826954/145‑1 (MQ=38) tAGCGCCGCCGGGTGACTTTTTTGGCAAAAATGAGGGGGTTAGGCAAAAACGCTTCGGGG‑GTGACCCCGCTCCTACAAGGGCATGTGTAT‑CCGTGTTTGGAGCGGTTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGtt < 2:1819349/150‑1 (MQ=255) agagCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGGACCCCCGCCTAAAACGGCCTGGGTAT‑CCCTGGTAGGAGCGGGTTCCCCCGCGAAGGGGCCCGGTCCTGCGCCCCGGAGGGCGGGTTc > 1:4626213/1‑150 (MQ=255) gccgggggACGTGTTTGGCCAACCGGCGGGGGTTCGGCAAAAACGCTGCGGGG‑GGGACCCCGCGCCCCCACGGGCTGGTGGAG‑CCGTGGGTGGCGGGGGTCCCCCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCggg < 2:610198/147‑1 (MQ=255) ctgggggACTTTGTTGGCAAAAATGCGGGGGTTCGGCCAAAAAGCCGCGCGG‑GTGAACCCGCTCCTACACGGGCATGTGAAT‑CCCTGGTCGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCgggg < 2:3496540/148‑1 (MQ=38) ggggACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGAACCCGCGCCGAAAAGGGCATGTGTTT‑CCCGGGTAGGGGCGGGTTGACCCGCGCAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGGTCCTCGGGgcgc > 1:3369356/1‑150 (MQ=255) ggggACTTGTTTGCCCAAATTGTGGGGGTTAGTCAAAAACGCTTGGGGG‑GTTACCCCGCGCCTACCCGGGCTTGTGTAT‑CCCTGGTTGGAGCGGTTACACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGgcgg < 2:185474/150‑2 (MQ=255) ggACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAATGCTTCGCGG‑GTGTACCCGCACCAAAAAGGGCAGGTGTAT‑ACCAGGGAGGAGCGGGGTCACCCGCGAAGAGGCCCCGGCAATCGCCCCGGTGGGCGGGGTAATCGGGGCGCCg > 1:4650168/1‑150 (MQ=255) tttGTTGGCCAAAATGCGGGGGTTCGCCCAAAAAGCTTCGGGG‑GGCAACCCGCCCCAACACGGGCATGTGTAC‑CCCGGGTAGGCGCGGGTACACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAAcc < 2:674609/150‑1 (MQ=255) tttGTGGCCCAACATGCGGGGGTTCGGCCAAAACGCGTCGGGG‑GTGAACCCGCCCCCACACGGGCTTGTGTAT‑CCCGGGTCGGCGGGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAAcc < 2:541465/150‑1 (MQ=255) tgGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GGGAACCCGCTCCTACAAGGGAATGTGTAA‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACcgccgc < 2:2698960/150‑1 (MQ=255) tgGCCAAAATGAGGGGGACCGCCCAAAAAGCTTCGCGG‑GTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACcgccgc < 1:4188509/150‑1 (MQ=255) ggCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGAACCCCCGCCAACAAGGGCAGGTGTAT‑CCCCGGGAGGAGCCGGGTCACCCCCCCAGAGGCCCCGGCCTGCGCCCCGGAGGGCGGGGTCATCGGGGCGCCGCACccccgcc > 2:1063199/1‑149 (MQ=255) caaaaaTGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGAACCCGCTCCTACACGGGCTTGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGaa < 2:3173407/148‑1 (MQ=255) aaggcgggggTTCGGCCAAAACGCTGCGCGG‑GTGAACCCGCGCCTACACGGGCCTGTGTAT‑CCCTGGTCGGAGCGGGTTCCCCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGa < 2:3104676/145‑1 (MQ=255) tgtgggggTTCGGCAAAAACGCTTGGGGG‑TTCACCCCGCTCCTAAACGGGATTGTGTAT‑CCCTGTTTGGTGGGGTTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGAcc < 1:1185341/147‑1 (MQ=255) gtgggggTTAGGCCAAAAAGCTTCGGGG‑GTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTACACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGAccc < 2:1423512/148‑1 (MQ=255) gggggTTCGGCAAAAACGCTGCGGGG‑GTGAACCCGCTCCTACCCGGGCTTGTGTAG‑CCGTGGTAGGAGGGGGTCCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGa < 2:1008778/150‑1 (MQ=255) gggggTTAGGCCAAAAAGCTTCGCGG‑GTGAACCCGCCCCTACAAGGGATTGTGTAT‑CCCTGGTAGTAGGGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGa < 2:552139/150‑1 (MQ=39) ccAAAAAGCTTCGCGG‑GTGAACCCCCGCCGACAAGGGCAGGTGTAT‑ACCGGGTGGGCGCGGGGTAACCCCCGAAGAGGCCCCCTCAATCGCCCCCTAGGGCGGGTTAAACGGGGCGCCGCACCCCCCCGAACACACCCCAACAAGCGCcg > 2:2641311/1‑150 (MQ=255) aGCTTCGCGG‑GTGAATCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAgg < 2:4462968/150‑1 (MQ=255) gcgG‑GTGAACCCGCTCCTACCAGGG‑ATACACATGCCCGTGGAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGt > 1:4561234/1‑150 (MQ=25) tGAACCCGCTCCTACCAGGG‑ATACACATGCCCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGcc > 1:616938/1‑150 (MQ=25) tGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGcc > 2:1573738/1‑150 (MQ=255) aaCCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCACGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTg > 1:3241207/1‑150 (MQ=255) aaCCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCACGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTg > 1:2692127/1‑150 (MQ=255) aCCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGc > 2:4915682/1‑150 (MQ=255) aCCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGc > 1:4665880/1‑150 (MQ=255) ccGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGt > 1:2894866/1‑150 (MQ=255) ccGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGt > 1:3025132/1‑150 (MQ=255) ccGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGt > 1:2953028/1‑150 (MQ=255) ccGCTCCTACAAGGGCATGTGTAT‑CACTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGCCTCGGTTGGCCTGCGt > 1:4065446/1‑150 (MQ=255) gccccTACATGGGCTTTTTTTT‑CCGTGTTTGGTGGGGGTTCCCCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGttt < 1:1917526/147‑1 (MQ=255) gCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGttt > 2:3146906/1‑150 (MQ=255) gCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGAGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGttt > 2:1008142/1‑150 (MQ=255) gCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGAGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGttt > 2:2579858/1‑150 (MQ=255) ccccTACCGGGGCTTGTTAAC‑CCCTGTTTGGCGGGGGTACCCCCGCGACGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGtttt < 1:1051930/148‑1 (MQ=255) ccTACACGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCa < 2:3284208/150‑1 (MQ=255) ccTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCa > 1:4282250/1‑150 (MQ=255) cTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCTTAGGGCGGGTTCATCGGGGCGCCGAACCCCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAg > 1:3646079/1‑150 (MQ=255) cTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCggg > 1:3839269/1‑76 (MQ=255) cTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCggg < 2:3839269/76‑1 (MQ=255) cTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCACGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTATTCAg > 2:2008127/1‑150 (MQ=255) tACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAgg < 2:4785146/150‑1 (MQ=255) tACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAgg > 2:4784671/1‑150 (MQ=255) tACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAgg > 1:4276627/1‑150 (MQ=255) tACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAgg > 2:3537182/1‑150 (MQ=255) | TTATTGTGTTGGCACGGCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGG‑GTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGG > NC_002947/5726110‑5726408 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |