| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,779,380 | C→G | 7.9% | intergenic (+21/+22) | betA‑II → / ← PP_5065 | choline dehydrogenase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,779,380 | 0 | C | G | 7.9% | 581.3 / 30.4 | 178 | intergenic (+21/+22) | betA‑II/PP_5065 | choline dehydrogenase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (80/84); new base G (9/5); total (89/89) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.05e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.40e-01 | |||||||||||
Only 100 of 184 total aligned reads displayed.
TGATCGCCGAGAAGATTTCGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTGCGCATTTCACGCACGGCCTTCCCGCCTGGCGCC > NC_002947/5779232‑5779528 | tGATCGCCGAGAAGATTTCGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCa < 2:1219134/150‑1 (MQ=255) gCCGAGAAGATTTCGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGc < 1:1536041/150‑1 (MQ=255) gCCGAGAAGATTTCGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGc < 1:899216/150‑1 (MQ=255) gCCGAGAAGATTTCGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGc < 1:3665502/150‑1 (MQ=255) ccGAGAAGATTTCGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGcc > 2:482332/1‑150 (MQ=255) ccGAGAAGATTTCGGACAAGATCCGTGGTCGCAAGCCACCGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGcc > 2:482349/1‑150 (MQ=255) cGAGAAGATTTCGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGccc < 1:636148/150‑1 (MQ=255) cGAGAAGATTTCGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGccc < 1:757353/150‑1 (MQ=255) cGAGAAGATTTCGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGccc < 1:3872880/150‑1 (MQ=255) gcgaagaTTTCGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGcccc < 1:4757319/148‑1 (MQ=255) agaagaTTTCGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCTGCGCGGCCCCt < 1:1932383/150‑1 (MQ=255) agaagaTTTCGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCt < 2:2286375/150‑1 (MQ=255) gaagaTTTCGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCtt < 2:2009329/150‑1 (MQ=255) gaagaTTTCGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCtt < 2:2811967/150‑1 (MQ=255) aagaTTTCGGACCCGATCCGTGGTCGCAAGCCACGGCCGCGCAGCACCGCCAAGGACGACGTGGCGGGGGATGCACCAGGGAAAGGCACGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATAAGGGGCCGCTGCGCGGCCCCtga < 2:1983473/150‑3 (MQ=255) gaTTTCGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCACGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCa > 1:2407677/1‑150 (MQ=255) gaTTTCGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCa < 2:3547987/150‑1 (MQ=255) ttCGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCTGCGCGGCCCCtgatcaag < 1:2733975/150‑8 (MQ=255) tCGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGtt < 2:215452/150‑1 (MQ=255) cGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGttt < 2:1932973/150‑1 (MQ=255) gACAAGATCCGTGGTCGCAAGACACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTga > 1:2282670/1‑149 (MQ=255) aaGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCa < 1:5077825/150‑1 (MQ=255) aTCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGc > 1:1720676/1‑150 (MQ=255) tCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCg > 1:491596/1‑150 (MQ=255) ccGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCgg < 2:1521615/150‑1 (MQ=255) cGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCTCCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCGTGATCGGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTcgggcggg > 1:3017098/1‑150 (MQ=255) cGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCggg < 1:4812292/150‑1 (MQ=255) gTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCGAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGc > 1:2737119/1‑150 (MQ=255) gTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGGACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAgc < 2:823455/150‑1 (MQ=255) gCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCa > 1:4361467/1‑150 (MQ=255) gCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTATCACGTTTGCTCAGGCGGGCAGCGCa > 1:3186322/1‑150 (MQ=255) aaGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCaaa < 2:4983202/150‑1 (MQ=255) ccACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCaaaaaa > 2:4310685/1‑150 (MQ=255) ccACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCaaaaaa < 1:3099535/150‑1 (MQ=255) cACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAAt < 1:3384685/150‑1 (MQ=255) gccgccCAGCACCCCCAACTACTACGTGGCGGGGGAAGCACCAGTGAAACCCAACCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTCATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCCCAAAAAATGTgc < 2:864637/150‑1 (MQ=255) gCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTgc < 1:3950188/150‑1 (MQ=255) cgcgCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGTCCGCGCAGCGGCCCCTTTCACTTTTGATCTGGCGGGCTGCGCAAAAAATGTgcgc < 2:4193665/150‑1 (MQ=255) gcagcaCCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATc < 2:2101161/150‑1 (MQ=255) gcaCCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAAc < 2:3712947/150‑1 (MQ=255) gcaCCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAAc < 1:562353/150‑1 (MQ=255) ccaCCGCCAAGTACTACCTGGCGGGGGAAGCACCAGTGAAAGGCAAGCCGATGCGAGAAGAGAAACAGGGCTGAGGCCTTCATCACGGGCCGCGCAGCGGCCCCATTCACCATTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAAc < 2:3975491/149‑1 (MQ=255) aCCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGa < 1:1069260/150‑1 (MQ=255) ccGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGaa < 1:4110124/150‑1 (MQ=255) ccAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAatca > 1:1495597/1‑150 (MQ=255) ccAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAatca > 1:4075745/1‑150 (MQ=255) cAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAatcat > 1:703765/1‑150 (MQ=255) cAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAatcat > 2:2849704/1‑150 (MQ=255) gTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCt < 2:1592586/150‑1 (MQ=255) actacGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCg > 1:5024004/1‑150 (MQ=255) gggggATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTc < 1:611726/150‑1 (MQ=255) gggggATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTc < 2:629356/150‑1 (MQ=255) aTGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGcccc < 1:251651/150‑1 (MQ=255) aCCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCa < 1:85211/150‑1 (MQ=255) aCCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCa > 1:3151657/1‑150 (MQ=255) cAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAgc > 2:4081714/1‑150 (MQ=255) cAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAgc > 2:4897643/1‑150 (MQ=255) gTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAgcgc < 2:3170000/150‑1 (MQ=255) gTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAgcgc < 1:2304958/150‑1 (MQ=255) aaGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTgg < 1:454430/150‑1 (MQ=255) aGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGc > 2:4848498/1‑150 (MQ=255) aGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACAAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGc > 1:2954026/1‑150 (MQ=255) ggCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCg > 1:4515363/1‑150 (MQ=255) gCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGa > 2:2784096/1‑150 (MQ=255) gCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGa > 1:1450528/1‑150 (MQ=255) cAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGGCGCTGGCggg < 1:3937800/150‑3 (MQ=255) aaGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATc > 1:48626/1‑150 (MQ=255) aaGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATc > 1:946740/1‑150 (MQ=255) cGATGCGTGAAGTGAAACACTGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGAGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGaac > 2:3129850/1‑150 (MQ=255) gATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGaaca > 2:225711/1‑150 (MQ=255) cGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGAACGAACAACTg > 1:1613803/1‑150 (MQ=255) gtgaagtgaaACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGt > 2:2393177/1‑150 (MQ=255) tgaagtgaaACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTc > 1:826973/1‑150 (MQ=255) tgaagtgaaACAGGGCTGAGGCATTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTc < 1:1868114/150‑1 (MQ=255) gtgaaACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCtgt > 2:3049970/1‑150 (MQ=255) tgaaTCAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCtgtg > 2:3608818/1‑150 (MQ=255) tgaaACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCtgtg > 2:3325793/1‑150 (MQ=255) tgaaACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCtgtg > 1:4620911/1‑150 (MQ=255) tgaaACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCtgtg > 2:4677538/1‑150 (MQ=255) tgaaACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCtgtg > 2:3866276/1‑150 (MQ=255) aaaCAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTgcg < 2:749244/150‑1 (MQ=255) cAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTGCGCAt < 1:1971927/150‑1 (MQ=255) gCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTGCGCATTTca < 1:513541/150‑1 (MQ=255) tGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTGCGCATTTcacg > 2:1022577/1‑150 (MQ=255) tGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTGCGCATTTcacg > 2:1022643/1‑150 (MQ=255) tGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTGCGCATTTcacg > 2:51695/1‑150 (MQ=255) tGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTGCGCATTTcacg > 2:3265648/1‑150 (MQ=255) aGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTGCGCATTTcacgca > 2:1586055/1‑150 (MQ=255) gCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTGCGCATTTcacgcacg > 2:1122055/1‑150 (MQ=255) cTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTGCGCATTTCACGCACGGc > 2:3768250/1‑150 (MQ=255) ttGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTGCGCATTTCACGCACGGcc > 1:3662605/1‑150 (MQ=255) gtgaaaGGGGCCGCTGCGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTGCGCATTTCACGCACGGCCt > 2:3724334/6‑150 (MQ=255) gATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAACGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTGCGCATTTCACGCACGGCCtt < 2:44406/150‑1 (MQ=255) gaaaGGGGCCGCTGCGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCT‑GACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTGCGCATTTCACGCACGGCCTTcc > 2:3486790/4‑150 (MQ=255) aaaGGGGCCGCTGCGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTGCGCATTTCACGCACGGCCTTcc > 1:3750607/3‑150 (MQ=255) gggCCGCTGCGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTGCGCATTTCACGCACGGCCTTCCCGcc > 1:4172665/1‑150 (MQ=255) ggCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTGCGCATTTCACGCACGGCCTTCCCGCCt < 2:4470542/150‑1 (MQ=255) cgcgCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTGCGCATTTCACGCACGGCCTTCCCGCCTGgc < 2:1761202/150‑1 (MQ=255) gcgcAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTGCGCATTTCACGCACGGCCTTCCCGCCTGgcg > 2:1309363/1‑150 (MQ=255) gcgcAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTGCGCATTTCACGCACGGCCTTCCCGCCTGgcg > 2:3580260/1‑150 (MQ=255) | TGATCGCCGAGAAGATTTCGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTGCGCATTTCACGCACGGCCTTCCCGCCTGGCGCC > NC_002947/5779232‑5779528 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |