| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,851,366 | C→T | 9.6% | D31D (GAC→GAT) | ilvD → | dihydroxy‑acid dehydratase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,851,366 | 0 | C | T | 9.6% | 595.8 / 38.5 | 209 | D31D (GAC→GAT) | ilvD | dihydroxy‑acid dehydratase |
| Reads supporting (aligned to +/- strand): ref base C (100/88); new base T (5/15); total (105/104) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.90e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 210 total aligned reads displayed.
GGACAAGAGAAGCTCACTCCCCTATTTGTGACCTGATTAAGCCGCCAGGAGTGTTTCATGCCTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGCGCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGAT > NC_002947/5851217‑5851513 | ggACAAGAGAAGCTCACTCCCCTATTTGTGACCTGATTAAGCCGCCAGGAGTGTTTCATGCCTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGAc < 1:2182364/150‑1 (MQ=255) gACAAGAGAAGCTCACTCCCCTATTTGTGACCTGATTAAGCCGCCAGGAGTGTTTCATGCCTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACt > 1:920432/1‑150 (MQ=255) aCAAGAGAAGCTCACTCCCCTATTTGTGACCTGATTAAGCCGCCAGGAGTGTTTCATGCCTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACtt > 1:1183159/1‑150 (MQ=255) aCAAGAGAAGCTCACTCCCCTATTTGTGACCTGATTAAGCCGCCAGGAGTGTTTCATGCCTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACtt < 2:2694556/150‑1 (MQ=255) aCAAGAGAAGCTCACTCCCCTATTTGTGACCTGATTAAGCCGCCAGGAGTGTTTCATGCCTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACtt < 2:3449552/150‑1 (MQ=255) cAAGAGAAGCTCACTCCCCTATTTGTGACCTGATTAAGCCGCCAGGAGTGTTTCATGCCTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTc < 2:1572344/150‑1 (MQ=255) cAAGAGAAGCTCACTCCCCTATTTGTGACCTGATTAAGCCGCCAGGAGTGTTTCATGCCTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTc < 2:2470882/150‑1 (MQ=255) cAAGAGAAGCTCACTCCCCTATTTGTGACCTGATTAAGCCGCCAGGAGTGTTTCATGCCTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTc < 1:399383/150‑1 (MQ=255) cAAGAGAAGCTCACTCCCCTATTTGTGACCTGATTAAGCCGCCAGGAGTGTTTCATGCCTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTc < 1:1878872/150‑1 (MQ=255) aaGAGAAGCTCACTCCCCTATTTGTGACCTGATTAAGCCGCCAGGAGTGTTTCATGCCTGATTATCGTTCCAAGACTTCCACCCCAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCa < 2:2780134/150‑1 (MQ=255) aaGAGAAGCTCACTCCCCTATTTGTGACCTGATTAAGCCGCCAGGAGTGTTTCATGCCTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCa > 1:4140728/1‑150 (MQ=255) agagAAGCTCACTCCCCTATTTGTGACCTGATTAAGCCGCCAGGAGTGTTTCATGCCTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCaa < 2:2306290/150‑1 (MQ=255) agagAAGCTCACTCCCCTATTTGTGACCTGATTAAGCCGCCAGGAGTGTTTCATGCCTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCaa > 1:562498/1‑150 (MQ=255) agagAAGCTCACTCCCCTATTTGTGACCTGATTAAGCCGCCAGGAGTGTTTCATGCCTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCaa < 1:4926725/150‑1 (MQ=255) agagAAGCTCACTCCCCTATTTGTGACCTGATTAAGCCGCCAGGAGTGTTTCATGCCTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCaa < 2:224062/150‑1 (MQ=255) gagaAGCTCACTCCCCTATTTGTGACCTGATTAAGCCGCCAGGAGTGTTTCATGCCTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAg > 2:3303341/1‑150 (MQ=255) aGCTCACTCCCCTATTTGTGACCTGATTAAGCCGCCAGGAGTGTTTCATGCCTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAAc < 1:3379731/150‑1 (MQ=255) cTCACTCCCCTATTTGTGACCTGATTAAGCCGCCAGGAGTGTTTCATGCCTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCg > 2:3086308/1‑150 (MQ=255) tCACTCCCCTATTTGTGACCTGATTAAGCCGCCAGGAGTGTTTCATGCCTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGa > 2:3046043/1‑150 (MQ=255) aCTCCCCTATTTGTGACCTGATTAAGCCGCCAGGAGTGTTTCATGCCTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGatc > 2:4613660/1‑150 (MQ=255) tCCCCTATTTGTGACCTGATTAAGCCGCCAGGAGTGTTTCATGCCTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGatcat > 2:151149/1‑150 (MQ=255) ccccTATTTGTGACCTGATTAAGCCGCCAGGAGTGTTTCATGCCTGATTCTCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGatcatc < 1:4039808/150‑1 (MQ=255) ccccTATTTGTGACCTGATTAAGCCGCCAGGAGTGTTTCATGCCTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGatcatc < 2:2586580/150‑1 (MQ=255) ccccTATTTGTGACCTGATTAAGCCGCCAGGAGTGTTTCATGCCTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGatcatc < 2:457720/150‑1 (MQ=255) ccccTATTTGTGACCTGATTAAGCCGCCAGGAGTGTTTCATGCCTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGatcatc < 1:3934154/150‑1 (MQ=255) ccccTATTTGTGACCTGATTAAGCCGCCAGGAGTGTTTCATGCCTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGatcatc < 1:1459407/150‑1 (MQ=255) ccccTATTTGTGACCTGATTAAGCCGCCAGGAGTGTTTCATGCCTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCACCCGTGTCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGatcatc < 1:1490442/150‑1 (MQ=255) cccTATTTGTGACCTGATTAAGCCGCCAGGAGTGTTTCATGCCTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATcatcg > 1:3262089/1‑150 (MQ=255) cccTATTTGTGACCTGATTAAGCCGCCAGGAGTGTTTCATGCCTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATcatcg < 2:591988/150‑1 (MQ=255) ccTATTTGTGACCTGATTAAGCCGCCAGGAGTGTTTCATGCCTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATcatcgc > 1:1059416/1‑150 (MQ=255) cTATTTGTGACCTGATTAAGCCGCCAGGAGTGTTTCATGCCTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATcatcgcc > 1:3370519/1‑150 (MQ=255) aCCTGATTAAGCCGCCAGGAGTGTTTCATGCCTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAAc > 2:921772/1‑150 (MQ=255) ccTGATTAAGCCGCCAGGAGTGTTTCATGCCTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACt > 1:2821308/1‑150 (MQ=255) cTGATTAAGCCGCCAGGAGTGTTTCATGCCTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTc < 2:2883932/150‑1 (MQ=255) gttAAGCCGCCAGGAGTGTTTCATGCCTGATTATCGTTCCAAGTCTTCCACCCAAGGCCGCAACTTGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGtt > 1:22897/2‑150 (MQ=255) aTTAAGCCGCCAGGAGTGTTTCATGCCTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGtt < 1:4308742/150‑1 (MQ=255) tAAGCCGCCAGGAGTGTTTCATGCCTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCa < 1:799958/150‑1 (MQ=255) tAAGCCGCCAGGAGTGTTTCATGCCTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCa < 1:2267059/150‑1 (MQ=255) aaGCCGCCAGGAGTGTTTCATGCCTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCAc > 1:700859/1‑150 (MQ=255) ccgccAGGAGTGTTTCATGCCTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCa > 2:2976190/1‑150 (MQ=255) cAGGAGTGTTTCATGCCTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTc < 1:4236293/150‑1 (MQ=255) gtTTCATGCCTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCgg < 1:2306443/150‑1 (MQ=255) gtTACATGCCTGATTATCGTTCCAAGACTACCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCgg < 2:139573/150‑1 (MQ=255) tttCATGCCTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCggg > 1:2352901/1‑150 (MQ=255) tCATGCCTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGcc > 2:1991384/1‑150 (MQ=255) tCATGCCTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGATCACCCAGTTCGTACCGGGcc > 2:253601/1‑150 (MQ=255) aaaTGCCTCCTTATCGTTCGCGTACTACCACCCACGGCCGCAATATGGCTGGCGCGCGCGGCCTATGGCGCGCCACCGGCATGAAGGATGAGGATTTTGGCAAGCCAATTATTGCTGTGGTGAACTCGTTCACCCAGTTCGTGCCGGGcc < 1:3061430/148‑1 (MQ=255) aTGCCTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCAt > 2:4042757/1‑150 (MQ=255) tGCCTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCAtg > 1:126637/1‑150 (MQ=255) gcctccttATCGTTCGCGTACTACCACCCACGGCCGCAATATGGCTGGCGCGCGCGGCCTATGGCGCGCCACCGGCATGAAGGATGAGGATTTTGGCAAGCCAATTATTGCTGTGGTGAACTCGTTCACCCAGTTCGTGCCGGGCCAtgt < 1:4446974/144‑1 (MQ=255) ccTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCAtgtg < 2:1890860/150‑1 (MQ=255) cTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGc > 2:5116122/1‑150 (MQ=255) tCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGaa < 2:4136680/150‑1 (MQ=255) tCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGaa < 1:1113719/150‑1 (MQ=255) tCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGaa < 2:1365271/150‑1 (MQ=255) tCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGaa < 1:2700769/150‑1 (MQ=255) gTTCCAAGATTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAgg > 1:2799486/1‑150 (MQ=255) ttcgcgtaCTACCACCCACGGCCGCAAGATGGCTGGCGCGCGCGGCCTATGGCGCGCCACCGGCATGAAGGATGAGGATTTTGGCAAGCCAATTATTGCTGTGGTGAACTCGTTCACCCAGTTCGTGCCGGGCCATGTGCATCTGAAGGa < 2:4910527/143‑1 (MQ=255) tCCAAGACTTCCACCCACGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGAc < 2:3360181/150‑1 (MQ=255) gcgtaCTACCACCCACGGCCGCAATATGGCTGGCGCGCGCGGCCTATGGCGCGCCACCGGCATGAAGGATGAGGATTTTGGCAAGCCAATTATTGCTGTGGTGAACTCGTTCACCCAGTTCGTGCCGGGCCATGTGCATCTGAAGGACCt > 2:4858112/5‑150 (MQ=255) cAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCt > 2:3144333/1‑150 (MQ=255) cAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCt > 2:3765685/1‑150 (MQ=255) cgtaCTACCACCCACGGCCGCAATATGGCTGGCGCGCGCGGCCTATGGCGCGCCACCGGCATGAAGGATGAGGATTTTGGCAAGCCAATTATTGCTGTGGTGAACTCGTTCACCCAGTTCGTGCCGGGCCATGTGCATCTGAAGGACCtc < 1:1541133/147‑2 (MQ=255) aaGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTg > 1:2417131/1‑150 (MQ=255) aGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTgg < 1:3765685/150‑1 (MQ=255) aGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTgg < 2:812991/150‑1 (MQ=255) ttCCACCCCAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCa < 2:2695409/150‑1 (MQ=255) ttCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCa > 1:4516068/1‑150 (MQ=255) ttCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCa > 2:1908254/1‑150 (MQ=255) ccAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCtggt < 1:1671149/150‑1 (MQ=255) ccAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCtggt > 2:2277975/1‑150 (MQ=255) ccAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCtggt > 2:2933685/1‑150 (MQ=255) cAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCtggtg > 2:2345783/1‑150 (MQ=255) cAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCtggtg < 2:2141311/150‑1 (MQ=255) aaGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCtggtgg > 1:3517531/1‑150 (MQ=255) gCCGCAATATGGCTGGCGCGCGCGGCCTATGGCGCGCCACCGGCATGAAGGATGAGGATTTTGGCAAGCCAATTATTGCTGTGGTGAACTCGTTCACCCAGTTCGTGCCGGGCCATGTGCATCTGAAGGACCTCGGCCAGCTCGTCGcgc < 2:435945/150‑3 (MQ=255) cGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTcgc > 1:1310548/1‑150 (MQ=255) cATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAAt < 2:1966838/150‑1 (MQ=255) atcgCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGAACATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGCCTCGCGAAATc < 2:3625327/147‑1 (MQ=255) aTGGCTGGCGCGCGCGGCCTATGGCGCGCCACCGGCATGAAGGATGAGGATTTTGGCAAGCCAATTATTGCTGTGGTGAACTCGTTCACCCAGTTCGTGCCGGGCCATGTGCATCTGAAGGACCTCGGCCAGCTCGTCGCGCGCGAAAtt < 1:4775648/150‑2 (MQ=255) aTGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATc < 1:1380095/150‑1 (MQ=255) gcCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGCGcc > 1:2535959/1‑150 (MQ=255) ccGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGCGCCgg > 2:100952/1‑150 (MQ=255) gTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGCGCCGgtg < 2:2821308/150‑1 (MQ=255) tGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGCGCCGgtgg < 1:1725133/150‑1 (MQ=255) tcccGGTGGCGCGCCACAGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGCGCCGgtggc > 2:4965093/2‑150 (MQ=255) tcccGGTGGCGCGCCACAGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGCGCCGgtggc > 2:2555497/2‑150 (MQ=255) ccTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGCGCCGgtggcgt < 1:776092/150‑1 (MQ=255) gcgcgcCACCGGCATGAAGGATGAGGATTTTGGCAAGCCAATTATTGCTGTGGTGAACTCGTTCACCCAGTTCGTGCCGGGCCATGTGCATCTGAAGGACCTCGGCCAGCTCGTCGCGCGCGAAATTGAAGCAGCTGGCGGCGTTGCCaa < 2:3023995/150‑1 (MQ=255) gcgcgcCACCGGCATGAAGGATGAGGATTTTGGCAAGCCAATTATTGCTGTGGTGAACTCGTTCACCCAGTTCGTGCCGGGCCATGTGCATCTGAAGGACCTCGGCCAGCTCGTCGCGCGCGAAATTGAAGCAGCTGGCGGCGTTGCCaa < 1:2648517/150‑1 (MQ=255) gcgcCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGCGCCGGTGGCGTGGCCAAgg < 1:4717767/150‑1 (MQ=255) ccACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGCGCCGGTGGCGTGGCCAAGGAAt < 2:4240409/150‑1 (MQ=255) cACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGCGCCGGTGGCGTGGCCAAGGAAtt < 1:5054805/150‑1 (MQ=255) cGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGCGCCGGTGGCGTGGCCAAGGAATTCaa < 1:3046133/150‑1 (MQ=255) aGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGCGCCGGTGGCGTGGCCAAGGAATTCAACACCATcg > 2:612807/1‑150 (MQ=255) ggACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGCGCCGGTGGCGTGGCCAAGGAATTCAACACCATcgc > 2:1279503/1‑150 (MQ=255) ggACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGCGCCGGTGGCGTGGCCAAGGAATTCAACACCATcgc > 2:1677099/1‑150 (MQ=255) gACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGCGCCGGTGGCGTGGCCAAGGAATTCAACACCATcgcg < 1:1560918/150‑1 (MQ=255) gACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGCGCCGGTGGCGTGGCCAAGGAATTCAACACCATcgcg > 1:2953817/1‑150 (MQ=255) gACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGCGCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGAt < 2:5011454/150‑1 (MQ=255) | GGACAAGAGAAGCTCACTCCCCTATTTGTGACCTGATTAAGCCGCCAGGAGTGTTTCATGCCTGATTATCGTTCCAAGACTTCCACCCAAGGCCGCAACATGGCCGGCGCCCGTGCCCTGTGGCGCGCCACCGGGATGAAGGACGAAGACTTCAAGAAACCGATCATCGCCATCGCCAACTCGTTCACCCAGTTCGTACCGGGCCATGTGCACCTGAAGGACCTGGGCCAGCTGGTGGCTCGCGAAATCGAACGCGCCGGTGGCGTGGCCAAGGAATTCAACACCATCGCGGTCGAT > NC_002947/5851217‑5851513 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |