| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,160,959 | C→T | 6.6% | intergenic (+318/+550) | PP_5739 → / ← PP_5402 | hypothetical protein/NAD‑dependent acetyl‑CoA synthetase deacetylase subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,160,959 | 0 | C | T | 6.6% | 414.5 / 12.4 | 136 | intergenic (+318/+550) | PP_5739/PP_5402 | hypothetical protein/NAD‑dependent acetyl‑CoA synthetase deacetylase subunit |
| Reads supporting (aligned to +/- strand): ref base C (74/52); new base T (2/7); total (77/59) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.15e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 141 total aligned reads displayed.
ACCAAGCCGCAAGTGATCCATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCACGCCAGTCGTC > NC_002947/6160812‑6161108 | aaGCCGCAAGTGATCCATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCa > 1:1111190/1‑150 (MQ=255) aaGCCGCAAGTGATCCATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCa > 1:3566506/1‑150 (MQ=255) gCCGCAAGTGATCCATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAg < 1:3408347/150‑1 (MQ=255) cGCAAGTGATCCATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAggc > 1:1745053/1‑150 (MQ=255) tGATCCATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCTTGAGAGGGCGGC‑ttt < 1:3838881/150‑1 (MQ=255) tGATCCATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑ttt < 2:2340158/150‑1 (MQ=255) gATCCATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCTTGAGAGGGCGGC‑tttt < 1:2237846/150‑1 (MQ=255) aTCCATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCTTGAGAGGGCGGC‑ttttt < 1:4621819/150‑1 (MQ=255) aTCCATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCTTGAGAGGGCGGC‑ttttt < 2:1821453/150‑1 (MQ=255) aTCCATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAAGTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑tttgt > 2:3843867/1‑148 (MQ=255) tCCATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCTTGAGAGGGCGGC‑ttttta < 1:2239847/150‑2 (MQ=255) tCCATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCTTGAGAGGGCGGC‑ttttta < 2:2168982/150‑2 (MQ=255) tCCATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑tttttt > 2:2490933/1‑150 (MQ=255) ccATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑ttttttt < 2:2582279/150‑1 (MQ=255) cATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGATCCTCTCAATTCGTTGGCAAAAAAAAGCCGCCTTGAGAGGGCGGC‑ttttta < 1:3383569/150‑2 (MQ=38) cATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑tttttttt < 1:3039197/150‑1 (MQ=255) cATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑tttttttt < 1:701064/150‑1 (MQ=255) cATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑tttttttt < 2:2310153/150‑1 (MQ=255) aTTTCGCTTTAGCGTCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGAAATATCTATAGTCCTCAAAGTTCGAATGTTTCAGTACGTCGACGACCAACCTCTCAATTAGTTGTA‑‑TAAAAAGACGCCATCTCAAGGCGGC‑TATTTTTTg > 2:2613569/1‑150 (MQ=255) tttCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCATCGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCACTTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGc < 2:5004635/150‑1 (MQ=255) tttCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGc > 2:1938349/1‑150 (MQ=255) gCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCg > 2:4709629/1‑150 (MQ=255) ttAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGAt < 2:4042635/150‑1 (MQ=255) gCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTTGCCTCGGATTc < 1:4635749/150‑1 (MQ=255) cGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGt < 1:1268719/150‑1 (MQ=255) gCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTAt > 2:3565319/1‑150 (MQ=255) gCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTATTTGCCTCGGATTCGtct > 2:3565256/1‑148 (MQ=255) cTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATc < 2:2676764/150‑1 (MQ=255) tAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCg > 2:551256/1‑150 (MQ=255) tttttCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTAc < 2:4833253/150‑1 (MQ=255) ttttCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTAcc > 1:4187509/1‑150 (MQ=255) gTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACcgtcgt < 1:4704641/150‑1 (MQ=255) gTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACcgtcgt < 1:4531215/150‑1 (MQ=255) tttGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGtg > 2:4860283/1‑150 (MQ=255) tttGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCCCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGAATCGTATCGGTACCGTCGtg > 1:1091343/1‑150 (MQ=255) tGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCa < 1:2469108/150‑1 (MQ=255) attaattaTGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCg < 2:2006330/150‑1 (MQ=255) attaattaTGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCg > 2:131092/1‑150 (MQ=255) ttaattaTGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGc < 2:2353732/150‑1 (MQ=255) ttaattaTGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGc > 2:2185506/1‑150 (MQ=255) aattaTGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCg > 2:5008868/1‑150 (MQ=255) ttaTGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGaa > 2:4046331/1‑150 (MQ=255) taTGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAAc < 2:3593970/150‑1 (MQ=255) aTTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGa > 1:3440200/1‑150 (MQ=255) aGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCAc < 2:650692/150‑1 (MQ=255) tataGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACtgt < 2:1203220/150‑1 (MQ=255) tataGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACtgt < 1:2358971/150‑1 (MQ=255) tataGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACtgt > 2:566967/1‑150 (MQ=255) tataGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACtgt > 1:4963772/1‑150 (MQ=255) taGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGa > 1:4133444/1‑150 (MQ=255) taGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGa > 2:1722235/1‑150 (MQ=255) tCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGa < 1:388886/150‑1 (MQ=255) tCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGa < 1:1382506/150‑1 (MQ=255) cTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGAcc > 2:3527086/1‑150 (MQ=255) cTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGAcc < 2:353020/150‑1 (MQ=255) cTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGAcc > 2:1037404/1‑150 (MQ=255) tCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGTC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCa > 1:3963786/1‑150 (MQ=255) tCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCa < 1:392482/150‑1 (MQ=255) aCGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGAt > 1:599023/1‑150 (MQ=255) cGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGAtt < 2:4507121/150‑1 (MQ=255) tCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATc < 1:4259238/150‑1 (MQ=255) gACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCAt < 2:2364820/150‑1 (MQ=255) gACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCAt > 1:1782001/1‑150 (MQ=255) cTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGc < 1:4902947/150‑1 (MQ=255) tttCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTa > 2:148372/1‑150 (MQ=255) aGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACt > 2:1587851/1‑150 (MQ=255) tACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCa > 2:3015776/1‑150 (MQ=255) aCGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCaa < 1:1451556/150‑1 (MQ=255) cgacgaACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCtg > 1:2445503/1‑150 (MQ=255) acgaACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCtgt < 2:385898/150‑1 (MQ=255) acgaACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCtgtg > 1:3537866/1‑150 (MQ=255) gaACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGAc > 1:770725/1‑150 (MQ=255) aCCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATAATGCGTACACACAAACACCTGTGAcag > 1:467836/1‑148 (MQ=255) ctctCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGtt > 2:1071983/1‑150 (MQ=255) tctcAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTc < 2:3209506/150‑1 (MQ=255) tctcAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTc > 2:3683602/1‑150 (MQ=255) aaTTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGcc > 2:583205/1‑150 (MQ=255) aaTTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGcc < 1:2950694/150‑1 (MQ=255) aaTTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGGATAGGTACCGTCGTGCTGCCAGGGTCGCCGAACATGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGcc > 1:870974/1‑150 (MQ=255) gTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTg < 2:1111190/150‑1 (MQ=255) gC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCaa > 2:946804/1‑150 (MQ=255) aaaaaaaaGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCaa > 1:1916162/4‑150 (MQ=255) tAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAAcc > 2:3996572/1‑150 (MQ=255) tAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAAcc > 1:4488526/1‑150 (MQ=255) tAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAAcc > 1:4411713/1‑150 (MQ=255) tAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAAcc > 2:3400083/1‑150 (MQ=255) tAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAAcc > 1:2887408/1‑150 (MQ=255) tAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAAcc > 2:1596561/1‑150 (MQ=255) tAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAAcc > 2:1673738/1‑150 (MQ=255) aaaaaaGCCGCCTTGAGAGGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAAcc > 2:1148225/2‑150 (MQ=255) aaaaaGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCa > 2:7351/1‑150 (MQ=255) aaaaaGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCa > 1:1952808/1‑150 (MQ=255) aaGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCACGc > 2:2721115/1‑150 (MQ=255) gccgccCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCACGCCa < 2:1612597/150‑1 (MQ=255) gccCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCACGCCAgtc > 2:2112172/1‑150 (MQ=255) gccCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCACGCCAgtc < 2:933014/150‑1 (MQ=255) gccCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCACGCCAgtc < 2:4294814/150‑1 (MQ=255) ccTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCACGCCAgtcgt > 2:3784790/1‑150 (MQ=255) ctctCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCACGCCAgtcgtc < 1:1938349/150‑1 (MQ=255) ctctCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCACGCCAgtcgtc < 1:4970330/150‑1 (MQ=255) | ACCAAGCCGCAAGTGATCCATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGC‑‑TAAAAAGCCGCCCTCTCAAGGCGGC‑TTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCACGCCAGTCGTC > NC_002947/6160812‑6161108 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |